PANTHER Gene Information

Gene Symbol(s):

smg1

Organism:

Danio rerio

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Gene Name:

Serine_threonine-protein kinase SMG1

Gene ID:

ZDB-GENE-061013-767

Protein ID:

C5J7W8

Persistent Id:

PTN000875919

Alternate Ids:

F6NHQ0(AltAccession)	SMG1_DANRE(UniProtKB-ID)
2.7.11.1 {ECO:0000250\|UniProtKB:Q96Q15}(EC)	240248229(GI)
smg1{ECO:0000312\|ZFIN:ZDB-GENE-061013-767}(Symbol)	FM986821(EMBL)
ZDB-GENE-061013-767(ZFIN)	SMG1(Synonym)
CAX18774(EMBL-CDS)	569810(GeneID)
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PANTHER Classification

PANTHER Family:	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED (PTHR11139)
PANTHER Subfamily:	SERINE_THREONINE-PROTEIN KINASE SMG1 (PTHR11139:SF71)
PANTHER GO-slim Molecular Function:	protein serine/threonine kinase activity
PANTHER GO-slim Biological Process:	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	non-receptor serine/threonine protein kinase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	nucleotide binding, ATP binding, protein serine/threonine kinase activity, transferase activity, kinase activity
GO BP Complete:	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, phosphorylation
GO CC Complete:	nucleus, cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC), Metabolism of RNA, Nonsense-Mediated Decay (NMD)

Orthologs

ID	Organism	Type
HUMAN\|HGNC=30045\|UniProtKB=Q96Q15	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000007825.6\|UniProtKB=H2R014	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000010057.3\|UniProtKB=G3R3L1	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000022441.4\|UniProtKB=A0A5F7ZLC3	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1919742\|UniProtKB=Q8BKX6	Mus musculus	LDO
RAT\|RGD=1563508\|UniProtKB=A0A8I6GK52	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000020735.5\|UniProtKB=F1MBL6	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000032531.3\|UniProtKB=A0A480EFT1	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000013923.4\|UniProtKB=A0A9L0RCZ5	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000010626.6\|UniProtKB=A0A337S4U3	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845006073.1\|UniProtKB=A0A8I3N269	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000006102.4\|UniProtKB=A0A5F8H211	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000012229.3\|UniProtKB=F7FGW0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010020938.1\|UniProtKB=E1BW33	Gallus gallus	LDO
XENLA\|Gene=smg1.S\|UniProtKB=A0A8J1LWT8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-489705\|UniProtKB=A0A6I8QIW8	Xenopus tropicalis	LDO
LEPOC\|Ensembl=ENSLOCG00000007061.1\|UniProtKB=W5MJK6	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118429333\|UniProtKB=A0A9J7M6J4	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC583702\|UniProtKB=A0A7M7NSB0	Strongylocentrotus purpuratus	LDO
IXOSC\|EnsemblGenome=ISCW011944\|UniProtKB=B7QF19	Ixodes scapularis	LDO
AMBTC\|EnsemblGenome=AMTR_s00059p00199900\|UniProtKB=U5D8D2	Amborella trichopoda	LDO
MUSAM\|EnsemblGenome=Ma03_g31980\|UniProtKB=A0A804IIL6	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_033827mg\|UniProtKB=K4A4M3	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G097200\|UniProtKB=A0A1B6QI59	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb056540\|UniProtKB=A0A804M3K0	Zea mays	LDO
BRADI\|EnsemblGenome=BRADI_1g09310v3\|UniProtKB=I1GNI9	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0340780\|UniProtKB=A0A8I6WYL0	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G069200\|UniProtKB=A0A3B6IKQ9	Triticum aestivum	LDO
NELNU\|Gene=LOC104595829\|UniProtKB=A0A1U8A1R0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110794399\|UniProtKB=A0A9R0K2D5	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr03g0110281\|UniProtKB=A0A251V7A8	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900499970\|UniProtKB=A0A9R1UL27	Lactuca sativa	LDO
SOLLC\|EnsemblGenome=Solyc01g109080.3\|UniProtKB=A0A3Q7EUH8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107800078\|UniProtKB=A0A1S4AQ50	Nicotiana tabacum	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I012192\|UniProtKB=A0A059AN70	Eucalyptus grandis	LDO
GOSHI\|Gene=LOC107921970\|UniProtKB=A0A1U8L1L6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107925423\|UniProtKB=A0A1U8LEH5	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_006288\|UniProtKB=A0A061DX19	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_004G147800v3\|UniProtKB=A0A2K2AUT9	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_15G145800\|UniProtKB=A0A2C9UH07	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0938990\|UniProtKB=B9RZF8	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_11G123500\|UniProtKB=K7LPC3	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g068580\|UniProtKB=G7JF02	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr13_06650\|UniProtKB=A0A2I4GRL2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_2G237710\|UniProtKB=A0A0A0LLV1	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_8G112500\|UniProtKB=M5VVC5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_88215\|UniProtKB=D8R9U2	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_114908\|UniProtKB=D8SEL2	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c10_4250\|UniProtKB=A0A2K1JXM6	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0101s0045\|UniProtKB=A0A2R6WEI1	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_007900020\|UniProtKB=A0A1Y1IS43	Klebsormidium nitens	LDO