PANTHER Gene Information

Gene Symbol(s):

Hoxc5

Organism:

Rattus norvegicus

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Gene Name:

Homeo box C5

Gene ID:

1307584

Protein ID:

D3ZP88

Persistent Id:

PTN000674721

Alternate Ids:

157822081(GI)	NP_001101586(refSeq)
ENSRNOG00000016598(Ensembl)	ENSRNOP00000022247(Ensembl_PRO)
1307584(RGD)	D3ZP88(Synonym)
315341(GeneID)	ENSRNOT00000022247(Ensembl_TRS)
D3ZP88_RAT(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	HOMEOBOX PROTEIN HOX (PTHR45659)
PANTHER Subfamily:	HOMEOBOX PROTEIN HOX-C5 (PTHR45659:SF5)
PANTHER GO-slim Molecular Function:	RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific
PANTHER GO-slim Biological Process:	regulation of transcription by RNA polymerase II anterior/posterior pattern specification
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	homeodomain transcription factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA polymerase II cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, RNA polymerase II-specific
GO BP Complete:	anterior/posterior pattern specification, embryonic skeletal system development, regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, cell junction, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=5127\|UniProtKB=Q00444	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000052329.1\|UniProtKB=K7CBJ4	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000001629.3\|UniProtKB=G3QGY9	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000062271.1\|UniProtKB=G7N762	Macaca mulatta	LDO
MOUSE\|MGI=MGI=96196\|UniProtKB=P32043	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000009634.5\|UniProtKB=E1BHR6	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005014225.1\|UniProtKB=A0A4X1WAM0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000004151.3\|UniProtKB=F6WR44	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000032832.3\|UniProtKB=A0A2I2UXE6	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845018144.1\|UniProtKB=A0A8I3PAE7	Canis lupus familiaris	LDO
ANOCA\|Ensembl=ENSACAG00000010927.4\|UniProtKB=G1KKN3	Anolis carolinensis	LDO
XENLA\|Gene=hoxa5.S\|UniProtKB=A0A1L8FR89	Xenopus laevis	O
XENLA\|Gene=hoxa5.L\|UniProtKB=A0A1L8FW27	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-486061\|UniProtKB=F7D5Q3	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000007942.2\|UniProtKB=Q3V607	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000012387.2\|UniProtKB=H2MAF2	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000017036.2\|UniProtKB=H2MRD8	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000023188.1\|UniProtKB=H2LJY5	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000026145.1\|UniProtKB=A0A3B3HRL3	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-000823-9\|UniProtKB=Q9YGT6	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-980526-533\|UniProtKB=P09074	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-000822-1\|UniProtKB=Q9PWM5	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000011824.1\|UniProtKB=W5N1M9	lepisosteus oculatus	O
LEPOC\|Ensembl=ENSLOCG00000011819.1\|UniProtKB=W5N1M1	lepisosteus oculatus	O
BRAFL\|Gene=LOC118403105\|UniProtKB=A0A9J7HFR5	Branchiostoma floridae	O
BRAFL\|Gene=AmphiHox8\|UniProtKB=A9GC97	Branchiostoma floridae	O
BRAFL\|Gene=AmphiHox7\|UniProtKB=A9GCA1	Branchiostoma floridae	O
STRPU\|EnsemblGenome=GeneID_373356\|UniProtKB=P13545	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC588358\|UniProtKB=A0A7M7RDT6	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC574804\|UniProtKB=A0A7M7LLG5	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC105446743\|UniProtKB=A0A7M7LWN1	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00001174\|UniProtKB=P17486	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00023\|UniProtKB=A8WM58	Caenorhabditis briggsae	O
CAEBR\|WormBase=WBGene00023539\|UniProtKB=Q9GZ03	Caenorhabditis briggsae	O
DROME\|FlyBase=FBgn0003944\|UniProtKB=P83949	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP004661\|UniProtKB=Q7PGA9	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC000903\|UniProtKB=Q8T939	Tribolium castaneum	O
DROME\|FlyBase=FBgn0000014\|UniProtKB=P29555	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP004662\|UniProtKB=O76762	Anopheles gambiae	O
DROME\|FlyBase=FBgn0001077\|UniProtKB=P02835	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0260642\|UniProtKB=P02833	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP013157\|UniProtKB=F5HK01	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP004660\|UniProtKB=O76761	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC000916\|UniProtKB=D6W935	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC000894\|UniProtKB=D6W912	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC000912\|UniProtKB=Q95UR2	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_347212\|UniProtKB=E9G1J0	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_347209\|UniProtKB=E9G1J3	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_347228\|UniProtKB=E9G1J7	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_347208\|UniProtKB=E9G1J1	Daphnia pulex	O
HELRO\|EnsemblGenome=HelroG76830\|UniProtKB=T1G2P8	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG78362\|UniProtKB=T1G3B0	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG116524\|UniProtKB=T1EGF6	helobdella robusta	O
HELRO\|Gene=LOX2\|UniProtKB=Q01622	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG183449\|UniProtKB=T1FJP2	helobdella robusta	O