PANTHER Gene Information

Gene Symbol(s):

wu:fa99c02

Organism:

Danio rerio

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Gene Name:

Cleavage stimulation factor subunit 3

Gene ID:

ZDB-GENE-040426-1997

Protein ID:

F1QIB2

Persistent Id:

PTN000463365

Alternate Ids:

406326(GeneID)	ENSDARP00000003969(Ensembl_PRO)
ENSDART00000025423(Ensembl_TRS)	ZDB-GENE-040426-1997(ZFIN)
CU896647(EMBL)	F1QIB2(Synonym)
390979657(GI)	ENSDARG00000018904(Ensembl)
F1QIB2_DANRE(UniProtKB-ID)	NP_998218(refSeq)
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PANTHER Classification

PANTHER Family:	RNA CLEAVAGE STIMULATION FACTOR (PTHR19980)
PANTHER Subfamily:	CLEAVAGE STIMULATION FACTOR SUBUNIT 3 (PTHR19980:SF0)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	RNA 3'-end processing
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	mRNA polyadenylation factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	mRNA binding
GO BP Complete:	RNA 3'-end processing, mRNA 3'-end processing, RNA processing
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=2485\|UniProtKB=Q12996	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000003485.4\|UniProtKB=H2Q3D6	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000026591.2\|UniProtKB=G3SCJ8	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000002542.4\|UniProtKB=A0A1D5QQW9	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1351825\|UniProtKB=Q99LI7	Mus musculus	LDO
RAT\|RGD=1305901\|UniProtKB=F1M4W7	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000008617.6\|UniProtKB=A5PJR5	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000040954.3\|UniProtKB=A0A287BQU0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000023338.4\|UniProtKB=A0A9L0RQZ4	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000030711.3\|UniProtKB=M3WPX4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845026044.1\|UniProtKB=A0A8I3PSH2	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000025205.1\|UniProtKB=F7BFS8	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000009745.3\|UniProtKB=F6X9G6	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000015140.2\|UniProtKB=A0A6I8MZV7	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010022545.1\|UniProtKB=Q5F4A0	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000002823.4\|UniProtKB=G1KBE9	Anolis carolinensis	LDO
XENLA\|Gene_Synonym=XB5939409.L\|UniProtKB=Q4A1D1	Xenopus laevis	O
XENLA\|Gene=cstf3.S\|UniProtKB=Q6DDM9	Xenopus laevis	LDO
XENTR\|Gene=LOC100491871\|UniProtKB=A0A8J1JJI2	Xenopus tropicalis	O
XENTR\|Gene=LOC100496477\|UniProtKB=A0A8J1JFF5	Xenopus tropicalis	O
XENTR\|Gene=LOC116410384\|UniProtKB=A0A8J1JFF8	Xenopus tropicalis	LDO
XENTR\|Gene=LOC100493745\|UniProtKB=A0A8J1JIW7	Xenopus tropicalis	O
XENTR\|Gene=LOC108645362\|UniProtKB=A0A8J1JI63	Xenopus tropicalis	LDO
XENTR\|Gene=LOC108647437\|UniProtKB=A0A8J1JI86	Xenopus tropicalis	O
XENTR\|Xenbase=XB-GENE-980297\|UniProtKB=Q6P4J1	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000009762.3\|UniProtKB=H2M1G4	Oryzias latipes	LDO
LEPOC\|Ensembl=ENSLOCG00000004415.1\|UniProtKB=W5MA67	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000006401.3\|UniProtKB=F6QSK8	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118406872\|UniProtKB=A0A9J7HPI7	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC591939\|UniProtKB=A0A7M7P2D2	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00006307\|UniProtKB=Q19866	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG00546\|UniProtKB=A8WNM4	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00274534\|UniProtKB=A0A2A6CXE8	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0003559\|UniProtKB=P25991	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003019\|UniProtKB=Q7QDA0	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC015727\|UniProtKB=D2A3P0	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_303263\|UniProtKB=E9FU88	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW000254\|UniProtKB=B7P740	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG64205\|UniProtKB=T1FXR4	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g186287\|UniProtKB=A7S6G7	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG21977\|UniProtKB=B3RS66	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_22410\|UniProtKB=A9UQH8	Monosiga brevicollis	LDO
YEAST\|SGD=S000004665\|UniProtKB=P25298	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ADR137W\|UniProtKB=Q759Y6	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000183478\|UniProtKB=Q5AM44	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_D18612g\|UniProtKB=Q6C8L8	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04892\|UniProtKB=Q5B3I8	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G11020\|UniProtKB=Q4WXX4	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU09435\|UniProtKB=Q7S1Y0	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_11721\|UniProtKB=A7F375	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_12155\|UniProtKB=Q0U7V9	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC6F12.17\|UniProtKB=O14233	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_03594\|UniProtKB=B6K4N2	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNB02560\|UniProtKB=P0CO12	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_02055\|UniProtKB=Q4PCV8	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_05974\|UniProtKB=E3K682	Puccinia graminis	LDO
ENTH1\|EnsemblGenome=CL6EHI_170070\|UniProtKB=C4M1C9	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=CL6EHI_098370\|UniProtKB=B1N2W3	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0286645\|UniProtKB=Q54LG7	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_153358\|UniProtKB=F0ZNP6	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_32_3950\|UniProtKB=Q4Q4M7	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb11.01.7910\|UniProtKB=Q381G3	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_343030\|UniProtKB=A2EJR5	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0526500\|UniProtKB=Q8I3K0	Plasmodium falciparum	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_20911\|UniProtKB=B8BRF6	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GFY5_PHYRM\|UniProtKB=H3GFY5	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g506050v5\|UniProtKB=A0A2K3D2X4	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00101p00084550\|UniProtKB=W1NWJ6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_44G00400\|UniProtKB=A0A0K9P357	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma09_g16850\|UniProtKB=A0A804KKD4	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_000539mg\|UniProtKB=K3XF70	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3009G260500\|UniProtKB=A0A1B6PAU9	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb287160\|UniProtKB=A0A1D6M355	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os12g0571900\|UniProtKB=Q2QNB5	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g03980v3\|UniProtKB=A0A0Q3EIL3	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0230700\|UniProtKB=A0A8I6XPY4	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G074000\|UniProtKB=A0A3B6EAT0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G073700\|UniProtKB=A0A3B6GN90	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G088300\|UniProtKB=A0A3B6FJL3	Triticum aestivum	LDO
NELNU\|Gene=LOC104613378\|UniProtKB=A0A1U8BD96	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110802681\|UniProtKB=A0A9R0K9U7	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr03g0110571\|UniProtKB=A0A251V6T2	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002364mg\|UniProtKB=A0A022RQ86	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc10g050540.2\|UniProtKB=A0A3Q7JBJ2	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107798403\|UniProtKB=A0A1S4AKC4	Nicotiana tabacum	O
TOBAC\|Gene=LOC107827044\|UniProtKB=A0A1S4D8B4	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_11s0065g00710\|UniProtKB=F6H9L6	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_K03557\|UniProtKB=A0A059A8Q9	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra016588\|UniProtKB=M4DJB0	Brassica campestris	LDO
ARATH\|TAIR=locus=2007973\|UniProtKB=Q8GUP1	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107942974\|UniProtKB=A0A1U8N318	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107903363\|UniProtKB=A0A1U8J9I3	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_044507\|UniProtKB=A0A061FQQ9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g004093mg\|UniProtKB=A0A067FA60	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_003G106200v3\|UniProtKB=B9H057	Populus trichocarpa	LDO
RICCO\|Gene_ORFName=RCOM_1299930\|UniProtKB=B9S078	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_19G064500\|UniProtKB=I1N761	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_6g026900\|UniProtKB=G7KP74	Medicago truncatula	LDO
JUGRE\|Gene=LOC109000391\|UniProtKB=A0A6P9E174	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G594420\|UniProtKB=A0A0A0KZK4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G353000\|UniProtKB=A0A251RAS5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_270661\|UniProtKB=D8RA86	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_270418\|UniProtKB=D8QYX6	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c3_19050\|UniProtKB=A0A7I4DGG8	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0001s0525\|UniProtKB=A0A2R6XWX7	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002090200\|UniProtKB=A0A1Y1I9U8	Klebsormidium nitens	LDO