PANTHER Gene Information

Gene Symbol(s):

At1g04140

Organism:

Arabidopsis thaliana

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Gene Name:

Transducin family protein _ WD-40 repeat family protein

Gene ID:

2020285

Protein ID:

F4I458

Persistent Id:

PTN000524299

Alternate Ids:

F4I458_ARATH(UniProtKB-ID)	F4I458(Synonym)
AT1G04140(Ensembl)	NM_179256(refSeq)
CP002684(EMBL)	332189541(GI)
839272(GeneID)	AEE27662(EMBL-CDS)
locus:2020285(TAIR)
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PANTHER Classification

PANTHER Family:	ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 (PTHR22874)
PANTHER Subfamily:	TRANSDUCIN FAMILY PROTEIN _ WD-40 REPEAT FAMILY PROTEIN (PTHR22874:SF8)
PANTHER GO-slim Molecular Function:	ubiquitin ligase-substrate adaptor activity
PANTHER GO-slim Biological Process:	autophagosome assembly mitophagy
PANTHER GO-slim Cellular Component:	intracellular membrane-bounded organelle Cul4-RING E3 ubiquitin ligase complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	ubiquitin-like ligase-substrate adaptor activity, molecular_function
GO BP Complete:	autophagosome assembly, mitophagy
GO CC Complete:	nucleus, intracellular membrane-bounded organelle, Cul4-RING E3 ubiquitin ligase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=25990\|UniProtKB=Q9C0C7	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000003546.6\|UniProtKB=A0A2I3TB21	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000011880.3\|UniProtKB=G3S289	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000011526.4\|UniProtKB=F7C0N1	Macaca mulatta	O
MOUSE\|MGI=MGI=2443564\|UniProtKB=A2AH22	Mus musculus	O
RAT\|RGD=621330\|UniProtKB=F1LNQ2	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000004282.7\|UniProtKB=F1MPW0	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000013262.6\|UniProtKB=F1SI99	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000023789.4\|UniProtKB=A0A3Q2HHC0	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013635.6\|UniProtKB=M3WJ74	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845027652.1\|UniProtKB=A0A8I3S6E7	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000019891.5\|UniProtKB=A0A5F8GL02	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000014521.4\|UniProtKB=A0A6I8MYJ4	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010023866.1\|UniProtKB=A0A8V1A264	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000004085.4\|UniProtKB=G1KCI2	Anolis carolinensis	O
XENLA\|Gene=ambra1.S\|UniProtKB=A0A1L8GDL3	Xenopus laevis	O
XENLA\|Gene=LOC121402910\|UniProtKB=A0A8J1MXI9	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-984578\|UniProtKB=F6YH53	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000014123.2\|UniProtKB=H2MGH2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-111104-2\|UniProtKB=E7FAG6	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-050208-235\|UniProtKB=X1WHY6	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000005523.1\|UniProtKB=W5ME60	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000006168.3\|UniProtKB=F7BL69	Ciona intestinalis	O
BRAFL\|Gene=LOC118414217\|UniProtKB=A0A9J7L1P4	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC592522\|UniProtKB=A0A7M7P3N7	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC115918760\|UniProtKB=A0A7M7P5A9	Strongylocentrotus purpuratus	O
ANOGA\|EnsemblGenome=AGAP009862\|UniProtKB=A0A1S4H368	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC033221\|UniProtKB=A0A139WHE5	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_313380\|UniProtKB=E9G440	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW011831\|UniProtKB=B7Q8I9	Ixodes scapularis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g223189\|UniProtKB=A7T6Y6	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g167407\|UniProtKB=A7S7J1	Nematostella vectensis	O
CHLRE\|EnsemblGenome=CHLRE_16g655400v5\|UniProtKB=A0A2K3CT49	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00025p00063780\|UniProtKB=W1PW41	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_215G00040\|UniProtKB=A0A0K9PMA8	Zostera marina	O
MUSAM\|EnsemblGenome=Ma01_g04720\|UniProtKB=A0A804HQA8	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_029634mg\|UniProtKB=K3ZSQ4	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G159200\|UniProtKB=A0A1B6QBM3	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb097650\|UniProtKB=A0A1D6ENN9	Zea mays	O
SETIT\|EnsemblGenome=SETIT_000312mg\|UniProtKB=K3XEJ5	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3006G041600\|UniProtKB=A0A1B6PK25	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb087120\|UniProtKB=A0A804MI47	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb420250\|UniProtKB=K7TNH0	Zea mays	O
ORYSJ\|EnsemblGenome=Os09g0296900\|UniProtKB=Q0J2U9	Oryza sativa	O
ORYSJ\|EnsemblGenome=Os02g0290300\|UniProtKB=Q6K884	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g59200v3\|UniProtKB=I1IF85	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0535330\|UniProtKB=M0XV82	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS5B02G539500\|UniProtKB=A0A3B6LWT1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G326800\|UniProtKB=A0A3B6HYP8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G548800\|UniProtKB=A0A3B6N397	Triticum aestivum	O
NELNU\|Gene_ORFName=HUJ06_013257\|UniProtKB=A0A1U8B2G4	Nelumbo nucifera	O
SPIOL\|Gene=LOC110777756\|UniProtKB=A0A9R0HVY5	Spinacia oleracea	O
HELAN\|Gene_ORFName=HanXRQr2_Chr01g0022411\|UniProtKB=A0A9K3JWR6	Helianthus annuus	O
HELAN\|Gene_ORFName=HannXRQ_Chr01g0014861\|UniProtKB=A0A251VND6	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C500294710\|UniProtKB=A0A9R1VIV8	Lactuca sativa	O
HELAN\|Gene_ORFName=HannXRQ_Chr10g0280251\|UniProtKB=A0A251TFC4	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr10g0421751\|UniProtKB=A0A9K3HUZ0	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C900459710\|UniProtKB=A0A9R1UDJ5	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a022633mg\|UniProtKB=A0A022RTD5	Erythranthe guttata	O
SOLLC\|EnsemblGenome=Solyc05g053130.3\|UniProtKB=A0A3Q7GN30	Solanum lycopersicum	O
TOBAC\|Gene=LOC107828304\|UniProtKB=A0A1S4DCK3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107782769\|UniProtKB=A0A1S3Z476	Nicotiana tabacum	O
SOLTU\|EnsemblGenome=PGSC0003DMG401001493\|UniProtKB=M0ZMA3	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc09g091020.3\|UniProtKB=A0A3Q7J3P1	Solanum lycopersicum	O
TOBAC\|Gene=LOC107776350\|UniProtKB=A0A1S3YHM1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107822349\|UniProtKB=A0A1S4CTC4	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi07g00710\|UniProtKB=F6HZS8	Vitis vinifera	LDO
BRANA\|Gene_ORFName=GSBRNA2T00031877001\|UniProtKB=A0A078FAP3	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00052516001\|UniProtKB=A0A078H559	Brassica napus	O
BRACM\|EnsemblGenome=Bra032528\|UniProtKB=M4EUP6	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00089657001\|UniProtKB=A0A078FRK8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra030555\|UniProtKB=M4EP35	Brassica campestris	LDO
GOSHI\|Gene=LOC107952744\|UniProtKB=A0A1U8NX08	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_003819\|UniProtKB=A0A061DNK2	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g036953mg\|UniProtKB=A0A067EYW4	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G193900v3\|UniProtKB=A0A2K1XYB7	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_002G254700v3\|UniProtKB=A0A2K2BPH6	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_13G038200\|UniProtKB=A0A2C9UPR2	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0996070\|UniProtKB=B9T5V8	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G169000\|UniProtKB=I1JPA3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G170300\|UniProtKB=I1N9X3	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g069355\|UniProtKB=A0A072VKB4	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_7g099210\|UniProtKB=G7KYK1	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr01_33250\|UniProtKB=A0A2I4H1D1	Juglans regia	LDO
PRUPE\|EnsemblGenome=PRUPE_8G212400\|UniProtKB=A0A251N3C7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_413471\|UniProtKB=D8RPK3	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_445918\|UniProtKB=D8SMA7	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c10_9370\|UniProtKB=A0A2K1JYD0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_5930\|UniProtKB=A0A2K1JGJ8	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0068s0020\|UniProtKB=A0A2R6WPM1	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_009640030\|UniProtKB=A0A1Y1IVI7	Klebsormidium nitens	O