PANTHER Gene Information

Gene Symbol(s):

At1g12244

Organism:

Arabidopsis thaliana

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Gene Name:

Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Gene ID:

1009023117

Protein ID:

F4IC62

Persistent Id:

PTN002118017

Alternate Ids:

F4IC62(Synonym)	332190735(GI)
3766708(GeneID)	locus:1009023117(TAIR)
CP002684(EMBL)	AEE28856(EMBL-CDS)
F4IC62_ARATH(UniProtKB-ID)	NM_001035951(refSeq)
AT1G12244(Ensembl)
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PANTHER Classification

PANTHER Family:	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN (PTHR33317)
PANTHER Subfamily:	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN (PTHR33317:SF4)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:
PANTHER protein class:	RNA processing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	molecular_function
GO BP Complete:	rRNA 5'-end processing, rRNA processing
GO CC Complete:	chloroplast

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PARTE\|EnsemblGenome=GSPATT00012170001\|UniProtKB=A0D0Q1	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_264879\|UniProtKB=B8CG17	Thalassiosira pseudonana	LDO
CHLRE\|EnsemblGenome=CHLRE_09g409951v5\|UniProtKB=A0A2K3DFI9	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00106p00098180\|UniProtKB=W1P1A6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_15G01690\|UniProtKB=A0A0K9PV52	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g20260\|UniProtKB=A0A804IRU2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_037223mg\|UniProtKB=K4AEB6	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G302100\|UniProtKB=A0A1B6QLY7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb023510\|UniProtKB=A0A804LNB1	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os10g0555200\|UniProtKB=Q9AV16	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g33090v3\|UniProtKB=I1I625	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0056500\|UniProtKB=A0A8I6WU25	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS1B02G225400\|UniProtKB=A0A3B5YXR5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G211600\|UniProtKB=A0A3B5Y0H7	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS1D02G214800\|UniProtKB=A0A3B5ZW42	Triticum aestivum	LDO
NELNU\|Gene=LOC104599161\|UniProtKB=A0A1U8Q450	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110803138\|UniProtKB=A0A9R0KA54	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr12g0384211\|UniProtKB=A0A251T5C4	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400174720\|UniProtKB=A0A9R1XFD3	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a012825mg\|UniProtKB=A0A022QRJ5	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_34785\|UniProtKB=A0A2G2XV16	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400025975\|UniProtKB=M1CG81	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc01g090880.3\|UniProtKB=A0A3Q7EKC7	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107791442\|UniProtKB=A0A1S3ZXJ0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107762186\|UniProtKB=A0A1S3X8D7	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi15g00648\|UniProtKB=F6GV53	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H00160\|UniProtKB=A0A059AUC6	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00090369001\|UniProtKB=A0A078FNH5	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00035411001\|UniProtKB=A0A078GMW0	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra026983\|UniProtKB=M4EDX3	Brassica campestris	LDO
GOSHI\|Gene=LOC107924092\|UniProtKB=A0A1U8L5I2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107945540\|UniProtKB=A0A1U8N7K2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_005598\|UniProtKB=A0A061DV98	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g026881mg\|UniProtKB=A0A067HD46	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_004G225600v3\|UniProtKB=B9N0F0	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_17G011000\|UniProtKB=A0A2C9U3Y8	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0628520\|UniProtKB=B9SP56	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G033200\|UniProtKB=A0A0R0KEA6	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g027430\|UniProtKB=A0A072UJ99	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr05_03340\|UniProtKB=A0A2I4EL85	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G116900\|UniProtKB=A0A0A0L3L5	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G137100\|UniProtKB=A0A251QFE5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_408862\|UniProtKB=D8RA69	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c1_23620\|UniProtKB=A0A2K1L9G5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c1_23680\|UniProtKB=A0A2K1L9E7	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0010s0011\|UniProtKB=A0A2R6XKE3	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002670120\|UniProtKB=A0A1Y1I529	Klebsormidium nitens	LDO
CHLAA\|EnsemblGenome=Caur_3849\|UniProtKB=A9WCR4	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO1500\|UniProtKB=Q9KXQ0	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv2554c\|UniProtKB=P9WGV7	Mycobacterium tuberculosis	LDO
MYCGE\|EnsemblGenome=MG_505\|UniProtKB=Q9ZB76	mycoplasma genitalium	LDO
CLOBH\|Gene_OrderedLocusName=CBO2562\|UniProtKB=A5I4Z3	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0176\|UniProtKB=Q8DRE2	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_01720\|UniProtKB=Q2FXW1	Staphylococcus aureus	LDO
LISMO\|EnsemblGenome=CAC99580\|UniProtKB=Q8Y723	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_27390\|UniProtKB=O34634	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_4381\|UniProtKB=Q812R9	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_1545\|UniProtKB=Q9X1N1	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_2509\|UniProtKB=Q9RRI2	Deinococcus radiodurans	LDO
GLOVI\|EnsemblGenome=BAC89073\|UniProtKB=Q7NLJ1	Gloeobacter violaceus	LDO
SYNY3\|EnsemblGenome=BAA18780\|UniProtKB=P74662	Synechocystis	LDO
BACTN\|EnsemblGenome=BT_0419\|UniProtKB=Q8AAP5	Bacteroides thetaiotaomicron	LDO
CHLTR\|EnsemblGenome=CT_184\|UniProtKB=Q46370	Chlamydia trachomatis	LDO
RHOBA\|EnsemblGenome=RB8076\|UniProtKB=Q7UG74	Rhodopirellula baltica	LDO
AQUAE\|EnsemblGenome=aq_1498\|UniProtKB=O67469	Aquifex aeolicus	LDO
DICTD\|EnsemblGenome=Dtur_1024\|UniProtKB=B8E227	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN0698\|UniProtKB=Q8RFJ7	Fusobacterium nucleatum	LDO
HELPY\|EnsemblGenome=HP_0334\|UniProtKB=O25101	Helicobacter pylori	LDO
NEIMB\|EnsemblGenome=NMB1337\|UniProtKB=Q9JZ16	Neisseria meningitidis serogroup b	LDO
BRADU\|EnsemblGenome=BAC50359\|UniProtKB=Q89K24	Bradyrhizobium diazoefficiens	LDO
COXBU\|EnsemblGenome=CBU_2094\|UniProtKB=Q83A17	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_0305\|UniProtKB=P43981	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_3347\|UniProtKB=Q8EBZ8	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_0466\|UniProtKB=Q9KUP9	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC2747\|UniProtKB=Q8P766	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA0404\|UniProtKB=Q9I699	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM3097\|UniProtKB=Q8ZM50	Salmonella typhimurium	LDO
YERPE\|EnsemblGenome=YP_3505\|UniProtKB=Q8ZHG2	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77012\|UniProtKB=P0A8I1	Escherichia coli	LDO