PANTHER Gene Information

Gene Symbol(s):

At3g16680

Organism:

Arabidopsis thaliana

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Gene Name:

DNA binding _ DNA-directed RNA polymerase

Gene ID:

2089338

Protein ID:

F4J2R9

Persistent Id:

PTN002575916

Alternate Ids:

locus:2089338(TAIR)	AEE75851(EMBL-CDS)
820920(GeneID)	CP002686(EMBL)
15228284(GI)	AT3G16680(Ensembl)
F4J2R9_ARATH(UniProtKB-ID)	NP_188290(refSeq)
F4J2R9(Synonym)
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PANTHER Classification

PANTHER Family:	DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 (PTHR10535)
PANTHER Subfamily:	DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 (PTHR10535:SF0)
PANTHER GO-slim Molecular Function:	RNA polymerase I activity RNA polymerase II activity RNA polymerase III activity
PANTHER GO-slim Biological Process:	transcription by RNA polymerase III transcription elongation by RNA polymerase I tRNA metabolic process transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	RNA polymerase I complex RNA polymerase III complex RNA polymerase II, core complex
PANTHER protein class:	DNA-directed RNA polymerase

Pathway Categories:

Transcription regulation by bZIP transcription factor

RNA Polymerase II

General transcription regulation

RNA Polymerase II

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA polymerase III activity, DNA binding, RNA polymerase II activity, RNA polymerase I activity, DNA-directed 5'-3' RNA polymerase activity
GO BP Complete:	DNA-templated transcription, transcription elongation by RNA polymerase I, transcription by RNA polymerase II, tRNA transcription by RNA polymerase III
GO CC Complete:	nucleus, RNA polymerase I complex, RNA polymerase III complex, RNA polymerase II, core complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=9192\|UniProtKB=P19388	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000010183.5\|UniProtKB=K7CNC1	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000011267.3\|UniProtKB=G3R6M6	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000013927.4\|UniProtKB=A0A1D5QBD0	Macaca mulatta	O
MOUSE\|MGI=MGI=1913670\|UniProtKB=Q80UW8	Mus musculus	O
RAT\|RGD=1589817\|UniProtKB=B0BNE2	Rattus norvegicus	O
BOVIN\|Gene=POLR2E\|UniProtKB=Q2T9T3	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000020776.4\|UniProtKB=F2Z4J4	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000021472.4\|UniProtKB=I3LSI7	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011124.4\|UniProtKB=A0A9L0TR18	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000007318.5\|UniProtKB=M3W7I2	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845013457.1\|UniProtKB=A0A8I3NR02	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000005494.2\|UniProtKB=A0A5F8HKJ0	Monodelphis domestica	O
CHICK\|Ensembl=ENSGALG00010027995.1\|UniProtKB=F1NHV9	Gallus gallus	O
XENLA\|Gene=polr2e.L\|UniProtKB=A0A8J1MI03	Xenopus laevis	O
XENLA\|Gene=polr2e.S\|UniProtKB=Q6PA38	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-1005304\|UniProtKB=Q28HF5	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000015346.2\|UniProtKB=H2MKJ8	Oryzias latipes	O
DANRE\|Ensembl=ENSDARG00000074274.5\|UniProtKB=E7FDD7	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-040801-83\|UniProtKB=Q6DEG5	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000004599.1\|UniProtKB=W5MAV1	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000024933.1\|UniProtKB=H2XJG6	Ciona intestinalis	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_278645\|UniProtKB=C3ZQF0	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC578317\|UniProtKB=A0A7M7PKS4	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00019246\|UniProtKB=Q9N5K2	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00033647\|UniProtKB=A8XGH1	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00304705\|UniProtKB=A0A8R1V537	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0033571\|UniProtKB=Q7JZF5	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP010064\|UniProtKB=Q7PJW8	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC010003\|UniProtKB=D6WR76	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_308488\|UniProtKB=E9G252	Daphnia pulex	O
HELRO\|EnsemblGenome=HelroG65246\|UniProtKB=T1FY50	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG185710\|UniProtKB=T1FN65	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g92302\|UniProtKB=A7RT72	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG38029\|UniProtKB=B3S3Q9	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_31053\|UniProtKB=A9UR01	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_5835\|UniProtKB=A9USL7	Monosiga brevicollis	O
YEAST\|SGD=S000000358\|UniProtKB=P20434	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER036W\|UniProtKB=Q757H7	Eremothecium gossypii	O
CANAL\|CGD=CAL0000198535\|UniProtKB=A0A1D8PFJ8	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_D06457g\|UniProtKB=Q6CA26	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_00752\|UniProtKB=Q5BFC8	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_1G14110\|UniProtKB=Q4WS39	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU05305\|UniProtKB=Q7S8Z5	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_03009\|UniProtKB=A7ECH0	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_02900\|UniProtKB=Q0UZB4	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC23C4.15\|UniProtKB=Q09191	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_02101\|UniProtKB=B6JZQ6	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNA07710\|UniProtKB=Q5KN51	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_10512\|UniProtKB=A0A0D1E0K8	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_06512\|UniProtKB=E3K8W7	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_88106\|UniProtKB=F4P226	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_142090\|UniProtKB=C4LW54	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0291636\|UniProtKB=Q54EH2	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_154339\|UniProtKB=F0ZR32	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_18_0790\|UniProtKB=Q4QDW3	Leishmania major	O
TRYB2\|Gene_ORFName=Tb10.389.0120\|UniProtKB=Q388R6	Trypanosoma brucei	O
LEIMA\|EnsemblGenome=LMJF_18_0780\|UniProtKB=Q4QDW4	Leishmania major	O
TRYB2\|Gene_ORFName=Tb10.389.0110\|UniProtKB=Q388R5	Trypanosoma brucei	O
GIAIC\|EnsemblGenome=GL50803_8157\|UniProtKB=E2RU93	Giardia intestinalis	O
GIAIC\|EnsemblGenome=GL50803_137609\|UniProtKB=E2RU58	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_171980\|UniProtKB=A2DEU9	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_113600\|UniProtKB=A2DNL3	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1364800\|UniProtKB=Q8ID59	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00030191001\|UniProtKB=A0BLZ0	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00029882001\|UniProtKB=A0BL34	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_268816\|UniProtKB=B8C1Q1	Thalassiosira pseudonana	O
PHYRM\|Gene=H3HDK0_PHYRM\|UniProtKB=H3HDK0	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_09g403219v5\|UniProtKB=A0A2K3DF68	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00022p00032270\|UniProtKB=W1PN09	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00068p00034280\|UniProtKB=U5DFX7	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_44G00540\|UniProtKB=A0A0K9P111	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_440G00110\|UniProtKB=A0A0K9P3K6	Zostera marina	O
MUSAM\|EnsemblGenome=Ma02_g01840\|UniProtKB=A0A804HY99	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_002945mg\|UniProtKB=K3XM22	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_011067mg\|UniProtKB=K3YA25	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3006G127500\|UniProtKB=A0A1B6PLP7	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb079110\|UniProtKB=B4FGM1	Zea mays	O
ORYSJ\|EnsemblGenome=Os04g0487300\|UniProtKB=B7EQI7	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_5g13967v3\|UniProtKB=I1IZ23	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0177000\|UniProtKB=A0A8I7B6Z1	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G346100\|UniProtKB=A0A3B6B0E8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G364500\|UniProtKB=A0A3B6C8Z8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G344800\|UniProtKB=A0A1D5US45	Triticum aestivum	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0177030\|UniProtKB=F2E5L0	Hordeum vulgare subsp. vulgare	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0177020\|UniProtKB=F2DW18	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G346300\|UniProtKB=A0A3B6B296	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G345000\|UniProtKB=A0A3B6DFM8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G364700\|UniProtKB=A0A3B6C8T8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G346200\|UniProtKB=A0A3B6B0X4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G344900\|UniProtKB=A0A1D5US46	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G364600\|UniProtKB=A0A3B6C8Y3	Triticum aestivum	O
MUSAM\|EnsemblGenome=Ma02_g01650\|UniProtKB=A0A804HY78	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_002922mg\|UniProtKB=K3XLZ9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G328700\|UniProtKB=A0A1B6Q6M6	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb369320\|UniProtKB=A0A804UI10	Zea mays	O
ORYSJ\|EnsemblGenome=Os01g0805800\|UniProtKB=Q5VQW7	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_2g52777v3\|UniProtKB=I1HSL8	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0295570\|UniProtKB=F2DA18	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3A02G333200\|UniProtKB=A0A077S3H1	Triticum aestivum	O
NELNU\|Gene=LOC104609471\|UniProtKB=A0A1U8Q979	Nelumbo nucifera	O
SPIOL\|Gene=LOC110777702\|UniProtKB=A0A9R0JKE2	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0459581\|UniProtKB=A0A251T7T2	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C500277090\|UniProtKB=A0A9R1XE01	Lactuca sativa	O
HELAN\|EnsemblGenome=HanXRQr2_Chr03g0129321\|UniProtKB=A0A251VA31	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0208001\|UniProtKB=A0A251UMR2	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800426980\|UniProtKB=A0A9R1UQ02	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a013961mg\|UniProtKB=A0A022QBS1	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a013932mg\|UniProtKB=A0A022R2L8	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_15228\|UniProtKB=A0A2G2ZJP9	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_03355\|UniProtKB=A0A1U8F2I4	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400027218\|UniProtKB=M1CLJ4	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc05g053510.2\|UniProtKB=A0A3Q7GPG9	Solanum lycopersicum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400019984\|UniProtKB=M1BRS4	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400030104\|UniProtKB=M1CYD2	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc05g051790.3\|UniProtKB=A0A3Q7GL64	Solanum lycopersicum	O
TOBAC\|Gene=LOC107773718\|UniProtKB=A0A1S3Y9E8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107810407\|UniProtKB=A0A1S4BPA4	Nicotiana tabacum	O
TOBAC\|Gene=LOC107766974\|UniProtKB=A0A1S3XN28	Nicotiana tabacum	O
TOBAC\|Gene=LOC107782767\|UniProtKB=A0A1S3Z422	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi11g00300\|UniProtKB=F6HH08	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_C01278\|UniProtKB=A0A059CNE5	Eucalyptus grandis	O
BRANA\|Gene_ORFName=DARMORV10_C05P41040.1\|UniProtKB=A0A078HHR6	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A05P26450.1\|UniProtKB=A0A078F856	Brassica napus	O
BRACM\|EnsemblGenome=Bra031350\|UniProtKB=M4ERC6	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_A03P42720.1\|UniProtKB=A0A078HCN7	Brassica napus	O
BRACM\|EnsemblGenome=Bra006521\|UniProtKB=M4CQN2	Brassica campestris	O
BRACM\|EnsemblGenome=Bra001864\|UniProtKB=A0A398A8R7	Brassica campestris	O
GOSHI\|Gene=LOC107930778\|UniProtKB=A0A1U8LX47	Gossypium hirsutum	O
GOSHI\|Gene=LOC107932939\|UniProtKB=A0A1U8M167	Gossypium hirsutum	O
GOSHI\|Gene=LOC107932797\|UniProtKB=A0A1U8M4C2	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_037836\|UniProtKB=A0A061GMW8	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g030833mg\|UniProtKB=A0A067FTD1	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_006G161600v3\|UniProtKB=B9N7D1	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_03G023900\|UniProtKB=A0A2C9W3X8	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_16G112700\|UniProtKB=A0A251J0Y2	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_1051580\|UniProtKB=B9RKM1	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_07G084000\|UniProtKB=C6SVA4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_09G192900\|UniProtKB=C6SXZ4	Glycine max	O
MEDTR\|EnsemblGenome=MTR_6g088020\|UniProtKB=G7KPG4	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_5g016220\|UniProtKB=G7K3Y0	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g042230\|UniProtKB=G7KIC7	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g088010\|UniProtKB=G7KPG3	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_5g016200\|UniProtKB=G7K3X8	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_5g005470\|UniProtKB=G7K102	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr12_02280\|UniProtKB=A0A2I4FCU5	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_1G702030\|UniProtKB=A0A0A0LYM6	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_6G170410\|UniProtKB=A0A0A0KF69	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_7G374590\|UniProtKB=A0A0A0K8L9	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_2G121300\|UniProtKB=M5X630	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_2G121400\|UniProtKB=M5X0L0	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_181697\|UniProtKB=D8S8M8	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c25_14420\|UniProtKB=A0A7I4CN97	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c16_10739\|UniProtKB=A0A2K1J803	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c16_12587\|UniProtKB=A0A2K1J8B7	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c15_19440\|UniProtKB=A0A2K1JDT5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c9_12690\|UniProtKB=A0A2K1K2Y8	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c10_11560\|UniProtKB=A0A2K1JYM0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c2_29376\|UniProtKB=A0A2K1L3J2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c1_283\|UniProtKB=A0A2K1L6C3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_1940\|UniProtKB=A0A2K1KLV1	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_21420\|UniProtKB=A0A2K1KPF3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c6_19940\|UniProtKB=A0A2K1KGF3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c10_21990\|UniProtKB=A9RWG5	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0051s0089\|UniProtKB=A0A2R6WXB1	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_002560040\|UniProtKB=A0A0U9HP40	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002560020\|UniProtKB=A0A0U9HK78	Klebsormidium nitens	O