PANTHER Gene Information

Gene Symbol(s):

SLK3

Organism:

Arabidopsis thaliana

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Gene Name:

Probable transcriptional regulator SLK3

Gene ID:

504955415

Protein ID:

F4JT98

Persistent Id:

PTN001623894

Alternate Ids:

AT4G25515(Ensembl)	332659672(GI)
SLK3(Synonym)	CAA18172(EMBL-CDS)
NM_148375(refSeq)	CP002687(EMBL)
SLK3(Symbol)	AT4G25515(Ensembl_TRS)
AT4G25515(Ensembl_PRO)	locus:504955415(TAIR)
SLK3_ARATH(UniProtKB-ID)	828656(GeneID)
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PANTHER Classification

PANTHER Family:	LIM DOMAIN-BINDING PROTEIN (PTHR10378)
PANTHER Subfamily:	TRANSCRIPTIONAL REGULATOR SLK1-RELATED (PTHR10378:SF42)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	negative regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	nucleus transcription regulator complex
PANTHER protein class:	transcription cofactor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	molecular_function
GO BP Complete:	negative regulation of transcription by RNA polymerase II, positive regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus, transcription regulator complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
ANOCA\|Ensembl=ENSACAG00000012317.4\|UniProtKB=H9GIU1	Anolis carolinensis	O
XENLA\|Gene=ldb1.L\|UniProtKB=A0A8J0T5V2	Xenopus laevis	O
HUMAN\|HGNC=6532\|UniProtKB=Q86U70	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000023411.4\|UniProtKB=K7D3H1	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000002151.3\|UniProtKB=G3QIB3	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000009375.4\|UniProtKB=H9G1C3	Macaca mulatta	O
MOUSE\|MGI=MGI=894762\|UniProtKB=P70662	Mus musculus	O
RAT\|RGD=1310359\|UniProtKB=A0A8I6G409	Rattus norvegicus	O
RAT\|RGD=1310359\|UniProtKB=A0A8I6G409	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000005780.6\|UniProtKB=A0A3Q1M323	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000010574.5\|UniProtKB=F2Z5G6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000012948.3\|UniProtKB=F6Q285	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000001236.6\|UniProtKB=A0A337S668	Felis catus	O
MONDO\|Ensembl=ENSMODG00000011500.4\|UniProtKB=F6V1M4	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000007827.3\|UniProtKB=F6W7F7	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010020921\|UniProtKB=O42252	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000012317.4\|UniProtKB=H9GIU1	Anolis carolinensis	O
XENLA\|Gene=ldb1.S\|UniProtKB=A0A8J0TB71	Xenopus laevis	O
XENLA\|Gene=ldb1\|UniProtKB=P70060	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-493239\|UniProtKB=Q6NVL6	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000008393.2\|UniProtKB=H2LWP9	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000012373.2\|UniProtKB=A0A3B3HS76	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-990415-135\|UniProtKB=Q2YDQ6	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-990415-138\|UniProtKB=O73715	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000012717.1\|UniProtKB=W5N4U5	lepisosteus oculatus	O
HUMAN\|HGNC=6533\|UniProtKB=O43679	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000015935.6\|UniProtKB=K7B2X8	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000000354.4\|UniProtKB=A0A2I2ZYG9	Gorilla gorilla gorilla	O
MOUSE\|MGI=MGI=894670\|UniProtKB=O55203	Mus musculus	O
RAT\|RGD=1307921\|UniProtKB=A0A0G2K287	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000014058.6\|UniProtKB=F6R129	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000029227.4\|UniProtKB=A0A286ZJT9	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000008556.4\|UniProtKB=A0A3Q2HS72	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000010092.5\|UniProtKB=M3WCN7	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845000708.1\|UniProtKB=A0A8I3MII0	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000000910.4\|UniProtKB=F6ZHF4	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000004866.3\|UniProtKB=F7FZZ4	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010011096.1\|UniProtKB=A0A8V0Y3E7	Gallus gallus	O
CHICK\|Gene=LDB2\|UniProtKB=Q9W676	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000035813.1\|UniProtKB=A0A803TMF1	Anolis carolinensis	O
XENLA\|Gene=ldb2\|UniProtKB=Q1EQW7	Xenopus laevis	O
XENLA\|Gene=ldb2.S\|UniProtKB=A0A8J1MB03	Xenopus laevis	O
XENLA\|Gene=LOC108706548\|UniProtKB=A0A8J0U7T2	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-490279\|UniProtKB=A0A6I8SFW8	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000020101.2\|UniProtKB=A0A3B3H994	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-990415-137\|UniProtKB=O73714	Danio rerio	O
DANRE\|Gene=ldb2a\|UniProtKB=A0A8M2B3G5	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000003158.1\|UniProtKB=W5M5R6	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000014405.2\|UniProtKB=F6YH98	Ciona intestinalis	O
BRAFL\|Gene=LOC118414017\|UniProtKB=A0A9J7L1G8	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC577425\|UniProtKB=A0A7M7SYW6	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00002261\|UniProtKB=G5EEL0	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG17513\|UniProtKB=A8XRD0	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00105535\|UniProtKB=A0A2A6BCV8	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0013764\|UniProtKB=Q7KVG9	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP004691\|UniProtKB=A0A1S4GLT2	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC000244\|UniProtKB=D6WBT5	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_42148\|UniProtKB=E9FX36	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW010935\|UniProtKB=B7Q6T8	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG188929\|UniProtKB=T1FQH6	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG109833\|UniProtKB=T1EEW7	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g149517\|UniProtKB=A7T7Y6	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g103860\|UniProtKB=A7S437	Nematostella vectensis	O
YEAST\|SGD=S000002392\|UniProtKB=Q07684	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_ABL177W\|UniProtKB=Q75E47	Eremothecium gossypii	O
YARLI\|EnsemblGenome=YALI0_C05060g\|UniProtKB=Q6CD03	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_06264\|UniProtKB=C8V1H8	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_2G12910\|UniProtKB=Q4X0N1	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU01543\|UniProtKB=Q7RWZ1	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_08183\|UniProtKB=A7ES78	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_07468\|UniProtKB=Q0UL96	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC30B4.03c\|UniProtKB=O74364	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_02255\|UniProtKB=B6K1Z3	Schizosaccharomyces japonicus	O
PUCGT\|EnsemblGenome=PGTG_08860\|UniProtKB=E3KED1	Puccinia graminis	O
DICPU\|EnsemblGenome=DICPUDRAFT_147350\|UniProtKB=F0Z8A4	Dictyostelium purpureum	O
CHLRE\|EnsemblGenome=CHLRE_17g699300v5\|UniProtKB=A0A2K3CNT7	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_10g465400v5\|UniProtKB=A0A2K3DC64	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00069p00119460\|UniProtKB=U5DD57	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_43G00140\|UniProtKB=A0A0K9P1I2	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_171G00120\|UniProtKB=A0A0K9PUM1	Zostera marina	O
MUSAM\|EnsemblGenome=Ma07_g05970\|UniProtKB=A0A804JSN8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma02_g05210\|UniProtKB=A0A804HZG8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma01_g09540\|UniProtKB=A0A804HS56	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma10_g08610\|UniProtKB=A0A804KU32	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma01_g03260\|UniProtKB=A0A804HPS5	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_005892mg\|UniProtKB=K3XVD5	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3010G015900\|UniProtKB=A0A194YGT4	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb269310\|UniProtKB=A0A1D6LK41	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb378690\|UniProtKB=B8A2L9	Zea mays	O
SETIT\|EnsemblGenome=SETIT_029035mg\|UniProtKB=K3ZR05	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G045600\|UniProtKB=A0A1B6Q9A8	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb300910\|UniProtKB=A0A1D6HT43	Zea mays	O
ORYSJ\|EnsemblGenome=Os06g0126000\|UniProtKB=A0A0N7KLG1	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g49497v3\|UniProtKB=I1H139	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0642250\|UniProtKB=A0A8I6YI47	Hordeum vulgare subsp. vulgare	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0658420\|UniProtKB=A0A8I6YSM2	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS7D02G050000\|UniProtKB=A0A3B6THP0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7D02G146100\|UniProtKB=A0A3B6TKX7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G047100\|UniProtKB=A0A3B6SCJ4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G441500\|UniProtKB=A0A3B6I659	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G144600\|UniProtKB=A0A3B6REH7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G054900\|UniProtKB=A0A3B6RBM0	Triticum aestivum	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0745510\|UniProtKB=F2DDQ4	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS7A02G520700\|UniProtKB=A0A3B6RP22	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G437100\|UniProtKB=A0A3B6SSW9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7D02G510400\|UniProtKB=A0A3B6TRW6	Triticum aestivum	O
NELNU\|Gene=LOC104612709\|UniProtKB=A0A1U8BNA5	Nelumbo nucifera	O
NELNU\|Gene=LOC104596287\|UniProtKB=A0A1U7ZNI4	Nelumbo nucifera	O
SPIOL\|Gene=LOC110802117\|UniProtKB=A0A9R0JAZ5	Spinacia oleracea	O
SPIOL\|Gene=LOC110782470\|UniProtKB=A0A9R0I4X7	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0669451\|UniProtKB=A0A251SN26	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C200098970\|UniProtKB=A0A9R1WHM6	Lactuca sativa	O
HELAN\|Gene_ORFName=HanXRQr2_Chr04g0164911\|UniProtKB=A0A9K3J7V3	Helianthus annuus	O
HELAN\|Gene_ORFName=HannXRQ_Chr13g0417891\|UniProtKB=A0A251SVZ3	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C900478690\|UniProtKB=A0A9R1WR20	Lactuca sativa	O
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0210401\|UniProtKB=A0A251UP14	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0576261\|UniProtKB=A0A251SP41	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800392140\|UniProtKB=A0A9R1WYT4	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a004070mg\|UniProtKB=A0A022RG71	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001131mg\|UniProtKB=A0A022QAU1	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_09262\|UniProtKB=A0A1U8FZW3	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400014269\|UniProtKB=M1B4P0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g026190.3\|UniProtKB=A0A3Q7FHL8	Solanum lycopersicum	O
TOBAC\|Gene=LOC107797288\|UniProtKB=A0A1S4AG19	Nicotiana tabacum	O
TOBAC\|Gene=LOC107770245\|UniProtKB=A0A1S3XYJ1	Nicotiana tabacum	O
TOBAC\|Gene=LOC107807115\|UniProtKB=A0A1S4BDJ7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107811376\|UniProtKB=A0A1S4BSB4	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi16g00956\|UniProtKB=F6HP62	Vitis vinifera	O
BRANA\|Gene_ORFName=DARMORV10_C08P09540.1\|UniProtKB=A0A078ISK8	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00022554001\|UniProtKB=A0A078J2H3	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00006796001\|UniProtKB=A0A078IQY4	Brassica napus	O
BRACM\|EnsemblGenome=Bra010458\|UniProtKB=M4D1V8	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00096133001\|UniProtKB=A0A078IH05	Brassica napus	O
BRACM\|EnsemblGenome=Bra019158\|UniProtKB=M4DRL5	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_A03P56060.1\|UniProtKB=A0A078IJM7	Brassica napus	O
BRACM\|EnsemblGenome=Bra019159\|UniProtKB=M4DRL6	Brassica campestris	O
GOSHI\|Gene=LOC107904618\|UniProtKB=A0A1U8JE61	Gossypium hirsutum	O
GOSHI\|Gene=LOC107936842\|UniProtKB=A0A1U8ME19	Gossypium hirsutum	O
GOSHI\|Gene=LOC107923489\|UniProtKB=A0A1U8L7P1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107888745\|UniProtKB=A0A1U8HWV8	Gossypium hirsutum	O
GOSHI\|Gene=LOC107947293\|UniProtKB=A0A1U8NED9	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_015099\|UniProtKB=A0A061G0L7	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g042790mg\|UniProtKB=A0A067F885	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g003241mg\|UniProtKB=A0A067FA34	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_003G121800v3\|UniProtKB=A0A2K2B5W1	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_1684250\|UniProtKB=B9RC27	Ricinus communis	O
POPTR\|EnsemblGenome=POPTR_012G136100v3\|UniProtKB=A0A2K1YD61	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_015G138500v3\|UniProtKB=A0A2K1XMN3	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_14G028800\|UniProtKB=A0A251J9L3	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_06G144100\|UniProtKB=A0A251KR56	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_1496960\|UniProtKB=B9R9G2	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_16G198300\|UniProtKB=I1MQ16	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_09G146200\|UniProtKB=A0A0R0I8J3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G198200\|UniProtKB=I1MQ14	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_09G146100\|UniProtKB=A0A0R0IFU3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_U036900\|UniProtKB=K7LDZ4	Glycine max	O
JUGRE\|EnsemblGenome=Jr10_08490\|UniProtKB=A0A2I4GZ29	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_11930\|UniProtKB=A0A2I4FGC3	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_11920\|UniProtKB=A0A2I4FGA2	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_3G180360\|UniProtKB=A0A0A0L6F2	Cucumis sativus	O
CUCSA\|EnsemblGenome=Csa_5G173550\|UniProtKB=A0A0A0KLE3	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_5G091500\|UniProtKB=M5W936	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_2G290500\|UniProtKB=M5XNY5	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_437711\|UniProtKB=D8QP20	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c16_1990\|UniProtKB=A0A7I4BBI5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c25_7960\|UniProtKB=A0A2K1IE84	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c25_7810\|UniProtKB=A0A7I4CQI7	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0030s0035\|UniProtKB=A0A2R6X875	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001160070\|UniProtKB=A0A1Y1HVB7	Klebsormidium nitens	O