PANTHER Gene Information

Gene Symbol(s):

VIT_05s0020g02960

Organism:

Vitis vinifera

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Gene Name:

ATP-dependent DNA helicase CHR12

Gene ID:

Vitvi05g00453

Protein ID:

F6HDM6

Persistent Id:

PTN002245322

Alternate Ids:

Vitvi05g00453_P001(Ensembl_PRO)	XM_010651576(refSeq)
F6HDM6_VITVI(UniProtKB-ID)	CCB50397(EMBL-CDS)
F6HDM6(Synonym)	Vitvi05g00453_t001(Ensembl_TRS)
100264840(GeneID)	FN595749(EMBL)
731389135(GI)	Vitvi05g00453(Ensembl)
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PANTHER Classification

PANTHER Family:	SNF2/RAD54 HELICASE FAMILY (PTHR10799)
PANTHER Subfamily:	ATP-DEPENDENT DNA HELICASE CHR12-RELATED (PTHR10799:SF854)
PANTHER GO-slim Molecular Function:	DNA binding ATP-dependent activity, acting on DNA
PANTHER GO-slim Biological Process:	positive regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:	nucleus chromatin
PANTHER protein class:	DNA helicase

Pathway Categories:

Wnt signaling pathway

Switched/Sucrose Non Fermentation

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, ATP binding, ATP-dependent activity, acting on DNA, histone binding, ATP-dependent chromatin remodeler activity, hydrolase activity
GO BP Complete:	chromatin remodeling, positive regulation of transcription by RNA polymerase II
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=11098\|UniProtKB=P51531	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000051168.1\|UniProtKB=A0A2I3SJ96	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000000513.3\|UniProtKB=A0A2I2Y7Z2	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000015279.4\|UniProtKB=F7DUE0	Macaca mulatta	O
MOUSE\|MGI=MGI=99603\|UniProtKB=Q6DIC0	Mus musculus	O
RAT\|RGD=1302988\|UniProtKB=A0A8I6ARN7	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000007494.5\|UniProtKB=A5PKK5	Bos taurus	O
FELCA\|Ensembl=ENSFCAG00000001568.6\|UniProtKB=M3VWV8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845002161.1\|UniProtKB=A0A8I3RQI7	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000003578.4\|UniProtKB=F7FQB7	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000008299.4\|UniProtKB=F6YNB0	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010011808.1\|UniProtKB=A0A1D5PC01	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000002423.4\|UniProtKB=G1KBB1	Anolis carolinensis	O
XENLA\|Gene=smarca2.L\|UniProtKB=A0A8J1KRT0	Xenopus laevis	O
XENLA\|Gene=LOC432089\|UniProtKB=A0A8J0U6B5	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-1013843\|UniProtKB=A0A6I8PNX6	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000020820.2\|UniProtKB=A0A3B3I0B8	Oryzias latipes	O
DANRE\|Gene=smarca2\|UniProtKB=A0A8M3ASL9	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000011499.1\|UniProtKB=W5N0H9	lepisosteus oculatus	O
HUMAN\|HGNC=11100\|UniProtKB=P51532	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000010488.6\|UniProtKB=K7B028	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000010488.6\|UniProtKB=K7B028	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000009882.3\|UniProtKB=G3S8S9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000012042.4\|UniProtKB=G7NL17	Macaca mulatta	O
MOUSE\|MGI=MGI=88192\|UniProtKB=Q3TKT4	Mus musculus	O
RAT\|RGD=621728\|UniProtKB=Q8K1P7	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000019220\|UniProtKB=A7Z019	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000013629.6\|UniProtKB=K7GT64	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000008334.4\|UniProtKB=A0A9L0RMW8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000004894.6\|UniProtKB=A0A2I2UID9	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845022085.1\|UniProtKB=A0A8I3PJ19	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000006287.4\|UniProtKB=F7CAF6	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000004355.3\|UniProtKB=F6Q910	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010008408.1\|UniProtKB=A0A8V0XY92	Gallus gallus	O
XENLA\|Gene=smarca4.S\|UniProtKB=Q4VQ79	Xenopus laevis	O
XENLA\|Gene=smarca4.L\|UniProtKB=A0A8J0TYK0	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-483983\|UniProtKB=F7EG86	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000003955.2\|UniProtKB=A0A3B3H8K4	Oryzias latipes	O
DANRE\|Gene=LOC100535713\|UniProtKB=A0A8M9QFL5	Danio rerio	O
ORYLA\|Ensembl=ENSORLG00000015452.2\|UniProtKB=H2MKY2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030605-1\|UniProtKB=Q7ZSY3	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000007820.1\|UniProtKB=W5MM96	lepisosteus oculatus	O
STRPU\|EnsemblGenome=LOC589355\|UniProtKB=A0A7M7PQ87	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004106\|UniProtKB=P91094	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG14390\|UniProtKB=A8XJW5	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00004204\|UniProtKB=G5EF53	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG06016\|UniProtKB=A8X136	Caenorhabditis briggsae	O
CAEBR\|WormBase=WBGene00030106\|UniProtKB=A8X678	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00116107\|UniProtKB=A0A2A6C6K0	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00277035\|UniProtKB=A0A2A6BYG7	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0000212\|UniProtKB=P25439	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP010462\|UniProtKB=A0A1S4H418	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC011073\|UniProtKB=A0A139WAR8	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_215757\|UniProtKB=E9H622	Daphnia pulex	O
HELRO\|EnsemblGenome=HelroG86367\|UniProtKB=T1G6B3	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g178940\|UniProtKB=A7RK66	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG58909\|UniProtKB=B3S405	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_11153\|UniProtKB=A9V8D0	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_29199\|UniProtKB=A9VAE6	Monosiga brevicollis	O
YEAST\|SGD=S000005816\|UniProtKB=P22082	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFR562C\|UniProtKB=Q752L2	Eremothecium gossypii	O
CANAL\|CGD=CAL0000176922\|UniProtKB=A0A1D8PGK4	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_D23287g\|UniProtKB=Q6C828	Yarrowia lipolytica	O
YEAST\|SGD=S000001388\|UniProtKB=P32597	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER375C\|UniProtKB=Q755Z2	Eremothecium gossypii	O
CANAL\|CGD=CAL0000193582\|UniProtKB=A0A1D8PJG4	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_C01243g\|UniProtKB=Q6CDE1	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_02278\|UniProtKB=Q5BB02	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_5G06330\|UniProtKB=Q4WTW4	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU06488\|UniProtKB=Q7RYI6	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_07017\|UniProtKB=A7ENW8	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_09308\|UniProtKB=Q0UG06	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPCC1620.14c\|UniProtKB=O94421	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_05313\|UniProtKB=B6K540	Schizosaccharomyces japonicus	O
SCHPO\|PomBase=SPAC1250.01\|UniProtKB=Q9UTN6	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_04755\|UniProtKB=B6K7N8	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNK02030\|UniProtKB=Q5K9G4	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_11301\|UniProtKB=A0A0D1CY49	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_08738\|UniProtKB=E3KGX7	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_183\|UniProtKB=F4P0H2	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0285205\|UniProtKB=Q54NM0	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_97424\|UniProtKB=F0ZGL4	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0271052\|UniProtKB=Q55C32	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_55110\|UniProtKB=F0ZKG6	Dictyostelium purpureum	O
TRIV3\|Gene_ORFName=TVAG_441050\|UniProtKB=A2FSS0	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_0216000\|UniProtKB=O96239	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00006258001\|UniProtKB=A0C4P2	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00011066001\|UniProtKB=A0CXB7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00011618001\|UniProtKB=A0CZ00	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_5001\|UniProtKB=B8C1P2	Thalassiosira pseudonana	O
PHYRM\|Gene=H3G6X2_PHYRM\|UniProtKB=H3G6X2	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_03g162701v5\|UniProtKB=A0A2K3DWI1	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00025p00245560\|UniProtKB=W1PYT8	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_102G00120\|UniProtKB=A0A0K9Q6D3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g06640\|UniProtKB=A0A804K3N1	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma06_g21520\|UniProtKB=A0A804JIU2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_021030mg\|UniProtKB=K3Z3B2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3009G040600\|UniProtKB=C5YZZ8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb108690\|UniProtKB=A0A804MSP9	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb417900\|UniProtKB=A0A1D6J209	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os05g0144300\|UniProtKB=Q60EX7	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g36380v3\|UniProtKB=A0A0Q3MTB9	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0019730\|UniProtKB=A0A8I6X0G1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS1A02G087900\|UniProtKB=A0A3B5XVQ5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS1B02G106900\|UniProtKB=A0A3B5YT10	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS1D02G089200\|UniProtKB=A0A3B5ZQD2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_012474\|UniProtKB=A0A1U8BLL9	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_020939\|UniProtKB=A0A1U7ZP97	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110800727\|UniProtKB=A0A9R0K8W9	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr09g0247211\|UniProtKB=A0A251TTL6	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0374851\|UniProtKB=A0A9K3N720	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0374911\|UniProtKB=A0A9K3I441	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr09g0247251\|UniProtKB=A0A251TSY6	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C700368560\|UniProtKB=A0A9R1UZW8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000451mg\|UniProtKB=A0A022RN86	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_02826\|UniProtKB=A0A2G3AL35	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc01g079690.3\|UniProtKB=A0A3Q7EH45	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107776074\|UniProtKB=A0A1S3YGX5	Nicotiana tabacum	O
TOBAC\|Gene=LOC107761173\|UniProtKB=A0A1S3X4N2	Nicotiana tabacum	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B01100\|UniProtKB=A0A059D0U7	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00006015001\|UniProtKB=A0A078FWN2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra040237\|UniProtKB=M4FGK9	Brassica campestris	LDO
ARATH\|TAIR=locus=2150270\|UniProtKB=F4K128	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2083033\|UniProtKB=F4J9M5	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107914887\|UniProtKB=A0A1U8KA86	Gossypium hirsutum	O
GOSHI\|Gene=LOC107897690\|UniProtKB=A0A1U8IKR5	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_020566\|UniProtKB=A0A061EL79	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g001197mg\|UniProtKB=A0A067GHE1	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_010G020700\|UniProtKB=A0A3N7H100	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_010G091200v3\|UniProtKB=A0A2K1YR83	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_008G149900v3\|UniProtKB=A0A2K1ZHL2	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_15G026000\|UniProtKB=A0A2C9UC71	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_03G181600\|UniProtKB=A0A2C9WA40	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0913820\|UniProtKB=B9RTY5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_10G250500\|UniProtKB=K7LLB3	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_11G004100\|UniProtKB=I1LFS4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_20G143200\|UniProtKB=I1NGB6	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g005840\|UniProtKB=G7K2A2	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_1g105050\|UniProtKB=G7IE30	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr07_20510\|UniProtKB=A0A2I4GSI2	Juglans regia	O
JUGRE\|EnsemblGenome=Jr12_12620\|UniProtKB=A0A2I4G9A7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G425110\|UniProtKB=A0A0A0KEV1	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G154600\|UniProtKB=A0A251QY39	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_102849\|UniProtKB=D8RVC9	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_176282\|UniProtKB=D8S229	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c27_3890\|UniProtKB=A9S7V7	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0030s0101\|UniProtKB=A0A2R6X8E3	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000100280\|UniProtKB=A0A1Y1HKU9	Klebsormidium nitens	LDO
SACS2\|EnsemblGenome=SSO1653\|UniProtKB=Q97XQ7	Sulfolobus solfataricus	O
STRCO\|Gene_OrderedLocusName=SCO5064\|UniProtKB=Q9ADE3	Streptomyces coelicolor	O
MYCGE\|EnsemblGenome=MG_018\|UniProtKB=P47264	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO1595\|UniProtKB=A5I268	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO1670\|UniProtKB=A5I2D8	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr1375\|UniProtKB=Q8DP39	Streptococcus pneumoniae	O
LISMO\|Gene=Q8Y6P0_LISMO\|UniProtKB=Q8Y6P0	Listeria monocytogenes	O
BACCR\|EnsemblGenome=BC_1744\|UniProtKB=Q81F57	Bacillus cereus	O
DEIRA\|EnsemblGenome=DR_1258\|UniProtKB=Q9RUX2	Deinococcus radiodurans	O
DEIRA\|EnsemblGenome=DR_1259\|UniProtKB=Q9RUX1	Deinococcus radiodurans	O
BACTN\|EnsemblGenome=BT_3353\|UniProtKB=Q8A2F2	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_708\|UniProtKB=O84714	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB5259\|UniProtKB=Q7UGF2	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB8\|UniProtKB=Q7UZE8	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB9344\|UniProtKB=Q7ULR2	Rhodopirellula baltica	O
FUSNN\|EnsemblGenome=FN1386\|UniProtKB=Q8RDV9	Fusobacterium nucleatum	O
FUSNN\|EnsemblGenome=FN1160\|UniProtKB=Q8REE7	Fusobacterium nucleatum	O
SHEON\|Gene_OrderedLocusName=SO_1651\|UniProtKB=Q8EGF3	Shewanella oneidensis	O
XANCP\|EnsemblGenome=XCC1453\|UniProtKB=Q8PAM7	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA0799\|UniProtKB=Q9I5D9	Pseudomonas aeruginosa	O
STRCO\|Gene_OrderedLocusName=SCO1167\|UniProtKB=Q8CK37	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO6262\|UniProtKB=Q9RKT0	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv2101\|UniProtKB=I6YCF3	Mycobacterium tuberculosis	O
BACSU\|EnsemblGenome=BSU_36280\|UniProtKB=P94593	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_5245\|UniProtKB=Q815C0	Bacillus cereus	O
GLOVI\|Gene=Q7NHW7_GLOVI\|UniProtKB=Q7NHW7	Gloeobacter violaceus	O
GLOVI\|Gene=Q7NIB7_GLOVI\|UniProtKB=Q7NIB7	Gloeobacter violaceus	O
SYNY3\|Gene=P74552_SYNY3\|UniProtKB=P74552	Synechocystis	O
CHLTR\|EnsemblGenome=CT_555\|UniProtKB=O84559	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB11712\|UniProtKB=Q7UDX7	Rhodopirellula baltica	O
THEYD\|EnsemblGenome=THEYE_A0640\|UniProtKB=B5YJR8	Thermodesulfovibrio yellowstonii	O