PANTHER Gene Information

Gene Symbol(s):

100831412

Organism:

Brachypodium distachyon

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Gene Name:

Pre-mRNA-splicing factor SYF2

Gene ID:

BRADI_1g34900v3

Protein ID:

I1GWY3

Persistent Id:

PTN001777594

Alternate Ids:

100831412(GeneID)	I1GWY3(Synonym)
CM000880(EMBL)	KQK17509(EMBL-CDS)
944082157(GI)	BRADI_1g34900v3(Ensembl)
I1GWY3_BRADI(UniProtKB-ID)	XP_003563548(refSeq)
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PANTHER Classification

PANTHER Family:	GCIP-INTERACTING PROTEIN P29 (PTHR13264)
PANTHER Subfamily:	PRE-MRNA-SPLICING FACTOR SYF2 (PTHR13264:SF5)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	catalytic step 2 spliceosome post-mRNA release spliceosomal complex Prp19 complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	RNA splicing, mRNA processing, mRNA splicing, via spliceosome
GO CC Complete:	nucleus, catalytic step 2 spliceosome, post-mRNA release spliceosomal complex, spliceosomal complex, Prp19 complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=19824\|UniProtKB=O95926	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000000352.6\|UniProtKB=G2HJ79	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000012796.3\|UniProtKB=A0A2I2YYX6	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000002968.4\|UniProtKB=F7GXY6	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1915842\|UniProtKB=Q9D198	Mus musculus	LDO
RAT\|RGD=621592\|UniProtKB=Q4QRB2	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001651.5\|UniProtKB=F1N607	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000037481.2\|UniProtKB=A0A287AZF3	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000010440.3\|UniProtKB=F6Q557	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000012023.4\|UniProtKB=F6TEU9	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000010324.5\|UniProtKB=A0A2I2U979	Felis catus	LDO
FELCA\|Ensembl=ENSFCAG00000043095.2\|UniProtKB=A0A337S7E4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845014016.1\|UniProtKB=A0A8I3NP67	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845014028.1\|UniProtKB=A0A8I3P1I2	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000013951.4\|UniProtKB=F7C3I7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000043250.1\|UniProtKB=A0A6I8N0K9	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010015803.1\|UniProtKB=A0A8V0YV61	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000026777.2\|UniProtKB=H9GQZ2	Anolis carolinensis	O
ANOCA\|Ensembl=ENSACAG00000013653.3\|UniProtKB=H9GK39	Anolis carolinensis	LDO
XENLA\|Gene=LOC108718857\|UniProtKB=A0A8J1L006	Xenopus laevis	O
XENLA\|Gene=syf2.S\|UniProtKB=A0A8J0VKW9	Xenopus laevis	LDO
XENLA\|Gene=syf2\|UniProtKB=Q8AVQ6	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000028820.1\|UniProtKB=A0A3B3H5R1	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040801-170\|UniProtKB=Q6DGP2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002728.1\|UniProtKB=W5M4A3	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000003017.3\|UniProtKB=F6QBK7	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118423250\|UniProtKB=A0A9J7LQI4	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC583913\|UniProtKB=A0A7M7RE90	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00019402\|UniProtKB=Q09385	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00036500\|UniProtKB=Q612R3	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00111268\|UniProtKB=A0A454XM36	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0033556\|UniProtKB=Q9V5Q4	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP010515\|UniProtKB=A0A1S4H495	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC006199\|UniProtKB=D6WVD0	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_109004\|UniProtKB=E9H1R4	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG178248\|UniProtKB=T1FCZ7	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG184929\|UniProtKB=T1FM63	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g169197\|UniProtKB=A7SD68	Nematostella vectensis	LDO
YARLI\|EnsemblGenome=YALI0_B03036g\|UniProtKB=Q6CFW4	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_01861\|UniProtKB=Q5BC69	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_4G09800\|UniProtKB=Q4WPM6	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU00361\|UniProtKB=Q7RZK5	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_09661\|UniProtKB=A7EWF2	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_07181\|UniProtKB=Q0UM33	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC3E7.13c\|UniProtKB=O59733	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02844\|UniProtKB=B6K1B9	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNH00300\|UniProtKB=Q5KCA1	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_11427\|UniProtKB=A0A0D1CFL8	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_06501\|UniProtKB=E3K8V6	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_36608\|UniProtKB=F4NW03	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_095880\|UniProtKB=C4M3E5	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=CL6EHI_060110\|UniProtKB=C4MBR2	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0284573\|UniProtKB=Q54PG4	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_147443\|UniProtKB=F0Z8H7	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_304250\|UniProtKB=A2FGQ9	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0803000\|UniProtKB=Q8IAN0	Plasmodium falciparum	LDO
PHYRM\|Gene=H3GBR8_PHYRM\|UniProtKB=H3GBR8	Phytophthora ramorum	LDO
AMBTC\|EnsemblGenome=AMTR_s00002p00017020\|UniProtKB=W1P1U9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_46G00340\|UniProtKB=A0A0K9P2B0	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma03_g00330\|UniProtKB=A0A804I6W3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma01_g08930\|UniProtKB=A0A804HRX5	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_006795mg\|UniProtKB=K3XXY7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3010G260500\|UniProtKB=C5Z9E6	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb227710\|UniProtKB=B4FA50	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb272560\|UniProtKB=A0A804UAJ2	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os06g0711600\|UniProtKB=Q5Z7Y7	Oryza sativa	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0725380\|UniProtKB=A0A8I6Z742	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G400600\|UniProtKB=A0A3B6TVV9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G407000\|UniProtKB=A0A3B6RNK4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G307000\|UniProtKB=A0A3B6SQI7	Triticum aestivum	LDO
NELNU\|Gene=LOC104611540\|UniProtKB=A0A1U8QA60	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_007059\|UniProtKB=A0A1U8ATZ7	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110800174\|UniProtKB=A0A9R0J745	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0438881\|UniProtKB=A0A251TM11	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0438901\|UniProtKB=A0A251TKG4	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0788011\|UniProtKB=A0A251UKY4	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr00c004g0832561\|UniProtKB=A0A9K3JYX4	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400185820\|UniProtKB=A0A9R1XD49	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a010566mg\|UniProtKB=A0A022RJW4	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_26555\|UniProtKB=A0A2G2YPB4	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_25244\|UniProtKB=A0A2G2YK68	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400010588\|UniProtKB=M1APP9	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400028947\|UniProtKB=M1CTR0	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400010589\|UniProtKB=M1APQ0	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400026715\|UniProtKB=M1CJD6	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc08g067460.1\|UniProtKB=A0A3Q7HRG7	Solanum lycopersicum	O
SOLLC\|EnsemblGenome=Solyc10g055640.2\|UniProtKB=A0A3Q7IIR9	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107786751\|UniProtKB=A0A1S3ZH43	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107815181\|UniProtKB=A0A1S4C5N3	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi03g00156\|UniProtKB=F6I0Z7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I01430\|UniProtKB=A0A059ANJ3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A07P04280.1\|UniProtKB=A0A078GY15	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra001999\|UniProtKB=M4CCR8	Brassica campestris	LDO
ARATH\|TAIR=locus=2039395\|UniProtKB=Q9ZVX7	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107898558\|UniProtKB=A0A1U8IN43	Gossypium hirsutum	O
GOSHI\|Gene=LOC107949108\|UniProtKB=A0A1U8NMZ4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107947183\|UniProtKB=A0A1U8NHG2	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107920904\|UniProtKB=A0A1U8KYT1	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_006604\|UniProtKB=A0A061DZ07	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g045904mg\|UniProtKB=A0A067FHL7	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g021740mg\|UniProtKB=A0A067FL15	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_004G176200v3\|UniProtKB=B9H1J4	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_11G096700\|UniProtKB=A0A2C9UZX0	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0979410\|UniProtKB=B9S5M2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_20G107700\|UniProtKB=I1NF98	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G281500\|UniProtKB=I1LF43	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g112640\|UniProtKB=A0A072VRJ1	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr13_09180\|UniProtKB=A0A2I4EWT2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_2G270830\|UniProtKB=A0A0A0LJ81	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_8G166600\|UniProtKB=M5VKL0	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_424632\|UniProtKB=D8SQJ5	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_442403\|UniProtKB=D8RT51	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c18_8200\|UniProtKB=A0A2K1J0C1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0011s0013\|UniProtKB=A0A2R6XJL8	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000050190\|UniProtKB=A0A1Y1HJY0	Klebsormidium nitens	LDO