PANTHER Gene Information

Gene Symbol(s):

SIGB

Organism:

Arabidopsis thaliana

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Gene Name:

RNA polymerase sigma factor sigB

Gene ID:

2025650

Protein ID:

O22056

Persistent Id:

PTN000779330

Alternate Ids:

NP_172330(refSeq)	15223259(GI)
SIGB_ARATH(UniProtKB-ID)	Q8GWC1(AltAccession)
SIGB(Symbol)	SIGA(Synonym)
AC006932(EMBL)	AT1G08540(Ensembl_TRS)
AT1G08540(Ensembl)	BAA24825(EMBL-CDS)
AT1G08540(Ensembl_PRO)	837376(GeneID)
locus:2025650(TAIR)
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PANTHER Classification

PANTHER Family:	RNA POLYMERASE SIGMA FACTOR RPO (PTHR30603)
PANTHER Subfamily:	RNA POLYMERASE SIGMA FACTOR SIGB (PTHR30603:SF57)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	Sigma factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	sigma factor activity
GO BP Complete:	cellular response to light stimulus, regulation of RNA biosynthetic process, tRNA metabolic process, DNA-templated transcription initiation, response to blue light, chloroplast organization, response to red light
GO CC Complete:	chloroplast

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
TRIAD\|EnsemblGenome=TriadG63024\|UniProtKB=B3SFN9	Trichoplax adhaerens	O
PLAF7\|EnsemblGenome=PF3D7_0621000\|UniProtKB=C6KT48	Plasmodium falciparum	O
THAPS\|EnsemblGenome=THAPSDRAFT_261083\|UniProtKB=B8BRS7	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_37306\|UniProtKB=B8CCC7	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_40966\|UniProtKB=B8C5F0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_36345\|UniProtKB=B8C8Z6	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_269327\|UniProtKB=B8C6E8	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_33891\|UniProtKB=B8C0J0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_33682\|UniProtKB=B8C130	Thalassiosira pseudonana	O
CHLRE\|EnsemblGenome=CHLRE_03g193400v5\|UniProtKB=A0A2K3DYH9	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_03g194950v5\|UniProtKB=Q8LK21	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00006p00257610\|UniProtKB=W1PCX6	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00011p00258380\|UniProtKB=W1NGZ7	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_76G00940\|UniProtKB=A0A0K9NP32	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_49G01160\|UniProtKB=A0A0K9P1E3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g17110\|UniProtKB=A0A804JWM9	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g27360\|UniProtKB=A0A804IUH3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma07_g04970\|UniProtKB=A0A804JSB5	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_035112mg\|UniProtKB=K4A8A6	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G423400\|UniProtKB=C5WQ19	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb012130\|UniProtKB=A0A804LHV0	Zea mays	O
ORYSJ\|EnsemblGenome=Os03g0271100\|UniProtKB=Q84Q84	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g66830v3\|UniProtKB=I1H713	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0388780\|UniProtKB=A0A8I6X2Y3	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS4A02G095200\|UniProtKB=A0A3B6HTC7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G210000\|UniProtKB=A0A3B6JLN4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G209300\|UniProtKB=A0A3B6IU53	Triticum aestivum	O
SETIT\|EnsemblGenome=SETIT_026193mg\|UniProtKB=K3ZHZ1	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3005G110481\|UniProtKB=A0A1Z5RIF0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb169360\|UniProtKB=K7UQN4	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os11g0448400\|UniProtKB=A0A0P0Y206	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g19540v3\|UniProtKB=I1ILU6	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0374390\|UniProtKB=F2CZB8	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4A02G157100\|UniProtKB=A0A3B6HUE0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G163500\|UniProtKB=A0A3B6IQM2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G154500\|UniProtKB=A0A3B6JJE3	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_001522\|UniProtKB=A0A1U7ZD19	Nelumbo nucifera	O
NELNU\|Gene=LOC104612638\|UniProtKB=A0A1U8BAT2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110790103\|UniProtKB=A0A9R0IJM1	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0694151\|UniProtKB=A0A251VQ49	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr04g0180201\|UniProtKB=A0A251V087	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C700355850\|UniProtKB=A0A9R1UZZ6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a003367mg\|UniProtKB=A0A022QES2	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_03080\|UniProtKB=A0A1U8EM77	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400031111\|UniProtKB=M1D2M3	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc01g081490.3\|UniProtKB=A0A3Q7F260	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107807767\|UniProtKB=A0A1S4BFN5	Nicotiana tabacum	O
TOBAC\|Gene=LOC107823823\|UniProtKB=A0A1S4CYD6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107788694\|UniProtKB=A0A1S3ZNL0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107765016\|UniProtKB=A0A1S3XGQ4	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi15g00046\|UniProtKB=D7UB90	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A026651\|UniProtKB=A0A059DJJ2	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_D01094\|UniProtKB=A0A059CEQ1	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A08P35090.1\|UniProtKB=A0A078H2Q8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra018617\|UniProtKB=M4DQ26	Brassica campestris	O
BRACM\|EnsemblGenome=Bra030732\|UniProtKB=M4EPL2	Brassica campestris	LDO
GOSHI\|Gene=LOC107936313\|UniProtKB=A0A1U8MFZ5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107963345\|UniProtKB=A0A1U8PYP6	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_025741\|UniProtKB=A0A061EZ47	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g007404mg\|UniProtKB=A0A067EDW2	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_019G044200v3\|UniProtKB=A0A2K1WPJ0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_013G070500v3\|UniProtKB=B9I6F1	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_08G156300\|UniProtKB=A0A2C9VJ08	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1515490\|UniProtKB=B9SDA3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_06G001600\|UniProtKB=A0A368UI03	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G002000\|UniProtKB=K7KHD7	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g118290\|UniProtKB=G7J988	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr12_06520\|UniProtKB=A0A2I4EE19	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G078550\|UniProtKB=A0A0A0K917	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G021900\|UniProtKB=A0A251N5E5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_117159\|UniProtKB=D8SHL6	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c1_36580\|UniProtKB=A0A2K1LB76	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c2_5110\|UniProtKB=A0A7I4D5C2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c1_36560\|UniProtKB=A0A2K1LB70	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_22330\|UniProtKB=Q9AYR7	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0214s0004\|UniProtKB=K0ISZ8	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_006060110\|UniProtKB=A0A1Y1IPU2	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_004520090\|UniProtKB=A0A1Y1IF99	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_000300310\|UniProtKB=A0A0U9HI10	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_007910030\|UniProtKB=A0A1Y1IKU7	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_005930080\|UniProtKB=A0A0U9HKN7	Klebsormidium nitens	O
CHLAA\|EnsemblGenome=Caur_3183\|UniProtKB=A9WI86	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_2037\|UniProtKB=A9WEI7	Chloroflexus aurantiacus	O
COXBU\|EnsemblGenome=CBU_1669\|UniProtKB=Q9KI19	Coxiella burnetii	O
SHEON\|Gene_OrderedLocusName=SO_3432\|UniProtKB=Q8EBR8	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0534\|UniProtKB=O51804	Vibrio cholerae	O
PSEAE\|EnsemblGenome=PA3622\|UniProtKB=P45684	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2924\|UniProtKB=P0DM81	Salmonella typhimurium	O
YERPE\|Gene_OrderedLocusName=YPO3355\|UniProtKB=Q7CKC7	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE76818\|UniProtKB=P13445	Escherichia coli	O
BACTN\|EnsemblGenome=BT_1907\|UniProtKB=Q8A6H7	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_1311\|UniProtKB=Q8A863	Bacteroides thetaiotaomicron	O
AQUAE\|EnsemblGenome=aq_1452\|UniProtKB=O67437	Aquifex aeolicus	O
CHLAA\|EnsemblGenome=Caur_3583\|UniProtKB=A9WAH7	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_0831\|UniProtKB=A9WGX1	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_3068\|UniProtKB=A9WGV1	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO0895\|UniProtKB=P18184	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv2710\|UniProtKB=P9WGI5	Mycobacterium tuberculosis	O
STRCO\|Gene_OrderedLocusName=SCO3202\|UniProtKB=P18249	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO2465\|UniProtKB=P18182	Streptomyces coelicolor	O
STRCO\|Gene_OrderedLocusName=SCO5820\|UniProtKB=P18183	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv2703\|UniProtKB=P9WGI1	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_249\|UniProtKB=P47491	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO3087\|UniProtKB=A5I6G8	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO2532\|UniProtKB=A5I4W3	Clostridium botulinum	O
BACSU\|Gene=sigK\|UniProtKB=P12254	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_4336\|UniProtKB=P62180	Bacillus cereus	O
BACSU\|EnsemblGenome=BSU_23450\|UniProtKB=P07860	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_4072\|UniProtKB=Q819B4	Bacillus cereus	O
BACSU\|EnsemblGenome=BSU_15330\|UniProtKB=P19940	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_3903\|UniProtKB=Q819Q9	Bacillus cereus	O
CLOBH\|Gene_OrderedLocusName=CBO2938\|UniProtKB=A5I618	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0979\|UniProtKB=P0A4J0	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_01662\|UniProtKB=P0A0J0	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAC99532\|UniProtKB=P52331	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_25200\|UniProtKB=P06224	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_4289\|UniProtKB=Q818G8	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1451\|UniProtKB=P77994	Thermotoga maritima	O
GLOVI\|Gene=Q7NEW6_GLOVI\|UniProtKB=Q7NEW6	Gloeobacter violaceus	O
SYNY3\|Gene=rpoD\|UniProtKB=Q55525	Synechocystis	O
SYNY3\|EnsemblGenome=BAA10419\|UniProtKB=Q59996	Synechocystis	O
GLOVI\|Gene=Q7NKZ2_GLOVI\|UniProtKB=Q7NKZ2	Gloeobacter violaceus	O
GLOVI\|Gene=Q7NP54_GLOVI\|UniProtKB=Q7NP54	Gloeobacter violaceus	O
GLOVI\|Gene=Q7NCH1_GLOVI\|UniProtKB=Q7NCH1	Gloeobacter violaceus	O
GLOVI\|Gene=Q7ND77_GLOVI\|UniProtKB=Q7ND77	Gloeobacter violaceus	O
GLOVI\|Gene=sigA\|UniProtKB=Q7NHG5	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA18672\|UniProtKB=P74565	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2232\|UniProtKB=P59117	Leptospira interrogans	O
CHLTR\|EnsemblGenome=CT_615\|UniProtKB=P18333	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB3727\|UniProtKB=Q7UTR4	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB1392\|UniProtKB=Q7UXE0	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB6347\|UniProtKB=Q7UQG1	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB6780\|UniProtKB=Q7UPQ9	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB6823\|UniProtKB=Q7UPN4	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB10339\|UniProtKB=Q7UF51	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_1490\|UniProtKB=O67464	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1029\|UniProtKB=B5YKU3	Thermodesulfovibrio yellowstonii	O
THEYD\|EnsemblGenome=THEYE_A0953\|UniProtKB=B5YKM1	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1315\|UniProtKB=B8E0E4	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1318\|UniProtKB=Q8RE13	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_0088\|UniProtKB=P55993	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB1538\|UniProtKB=Q9JYK7	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU1525\|UniProtKB=Q74CZ4	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU3089\|UniProtKB=Q748B8	Geobacter sulfurreducens	O
BRADU\|Gene=sigA\|UniProtKB=H7C819	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_1596\|UniProtKB=Q83BB6	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0533\|UniProtKB=P43766	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_1284\|UniProtKB=Q8EHE1	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0517\|UniProtKB=Q9KUK1	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC3736\|UniProtKB=Q8P4H2	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA0576\|UniProtKB=P26480	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM3211\|UniProtKB=P0A2E3	Salmonella typhimurium	O
YERPE\|Gene_OrderedLocusName=YPO0643\|UniProtKB=A0A380PME5	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77118\|UniProtKB=P00579	Escherichia coli	O