PANTHER Gene Information

Gene Symbol(s):

ykuD

Organism:

Bacillus subtilis

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Gene Name:

Putative L,D-transpeptidase YkuD

Gene ID:

BSU_14040

Protein ID:

O34816

Persistent Id:

PTN001255071

Alternate Ids:

Q796K7(AltAccession)	AJ222587(EMBL)
939216(GeneID)	YKUD_BACSU(UniProtKB-ID)
YKUD(Synonym)	CAB13277(Ensembl_PRO)
CAB13277(Ensembl_TRS)	ykuD(Symbol)
NP_389287(refSeq)	CAB13277(EMBL-CDS)
406855568(GI)	BSU_14040(Ensembl)
BSUB:BSU14040-MON(BioCyc)	2.-.-.-(EC)
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PANTHER Classification

PANTHER Family:	L,D-TRANSPEPTIDASE (PTHR30582)
PANTHER Subfamily:	L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED (PTHR30582:SF24)
PANTHER GO-slim Molecular Function:	carboxypeptidase activity serine hydrolase activity
PANTHER GO-slim Biological Process:	peptidoglycan biosynthetic process
PANTHER GO-slim Cellular Component:	extracellular region
PANTHER protein class:	cysteine protease

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	glycosyltransferase activity, peptidoglycan L,D-transpeptidase activity, transferase activity, hydrolase activity
GO BP Complete:	regulation of cell shape, peptidoglycan biosynthetic process, cell wall organization, peptidoglycan-protein cross-linking, sporulation resulting in formation of a cellular spore
GO CC Complete:	spore wall

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
CLOBH\|Gene_OrderedLocusName=CBO3179\|UniProtKB=A5I6Q8	Clostridium botulinum	O
CLOBH\|Gene_OrderedLocusName=CBO0898\|UniProtKB=A5I089	Clostridium botulinum	LDO
THEMA\|EnsemblGenome=TM_1686\|UniProtKB=Q9X212	Thermotoga maritima	LDO
SYNY3\|Gene=Q55604_SYNY3\|UniProtKB=Q55604	Synechocystis	LDO
THEYD\|EnsemblGenome=THEYE_A1296\|UniProtKB=B5YFR0	Thermodesulfovibrio yellowstonii	LDO
BRADU\|Gene=Q89M18_BRADU\|UniProtKB=Q89M18	Bradyrhizobium diazoefficiens	O
XANCP\|EnsemblGenome=XCC3210\|UniProtKB=Q8P5X3	Xanthomonas campestris	O
NEIMB\|EnsemblGenome=NMB0471\|UniProtKB=Q9K0U1	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU0183\|UniProtKB=Q74GR2	Geobacter sulfurreducens	LDO
BRADU\|Gene=Q89E58_BRADU\|UniProtKB=Q89E58	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89UE9_BRADU\|UniProtKB=Q89UE9	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89FL1_BRADU\|UniProtKB=Q89FL1	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89E55_BRADU\|UniProtKB=Q89E55	Bradyrhizobium diazoefficiens	LDO
BRADU\|Gene=Q89VM1_BRADU\|UniProtKB=Q89VM1	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89FR3_BRADU\|UniProtKB=Q89FR3	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89RZ1_BRADU\|UniProtKB=Q89RZ1	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89BG8_BRADU\|UniProtKB=Q89BG8	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89MH4_BRADU\|UniProtKB=Q89MH4	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89DB0_BRADU\|UniProtKB=Q89DB0	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89WV4_BRADU\|UniProtKB=Q89WV4	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_1080\|UniProtKB=Q83CN1	Coxiella burnetii	O
COXBU\|EnsemblGenome=CBU_1577\|UniProtKB=Q83BD4	Coxiella burnetii	LDO
SHEON\|Gene_OrderedLocusName=SO_3748\|UniProtKB=Q8EAY9	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_A0058\|UniProtKB=Q9KNA7	Vibrio cholerae	LDO
PSEAE\|EnsemblGenome=PA2854\|UniProtKB=Q9HZZ0	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM1375\|UniProtKB=Q8ZPQ0	Salmonella typhimurium	O
ECOLI\|EnsemblGenome=BAA15458\|UniProtKB=P76193	Escherichia coli	O
SALTY\|EnsemblGenome=STM1215\|UniProtKB=Q8ZQ02	Salmonella typhimurium	O
ECOLI\|EnsemblGenome=BAA35928\|UniProtKB=P75954	Escherichia coli	O
SALTY\|EnsemblGenome=STM2015\|UniProtKB=P40680	Salmonella typhimurium	LDO
ECOLI\|EnsemblGenome=BAA15807\|UniProtKB=P39176	Escherichia coli	LDO
SALTY\|EnsemblGenome=STM0837\|UniProtKB=Q7CQV7	Salmonella typhimurium	O
ECOLI\|EnsemblGenome=BAA35500\|UniProtKB=P0AAX8	Escherichia coli	O