PANTHER Gene Information

Gene Symbol(s):

rfbC

Organism:

Salmonella typhimurium

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Gene Name:

dTDP-4-dehydrorhamnose 3,5-epimerase

Gene ID:

STM2094

Protein ID:

P26394

Persistent Id:

PTN001843025

Alternate Ids:

SENT99287:STM2094-MONOMER(BioCyc)	Thymidine diphospho-4-keto-rhamnose 3,5-epimerase {ECO:0000305\|PubMed:17046787}(Synonym)
rfbC{ECO:0000303\|PubMed:1710759}(Symbol)	5.1.3.13 {ECO:0000269\|PubMed:17046787}(EC)
AE006468(EMBL)	AAL20998(Ensembl_TRS)
AAL20998(Ensembl_PRO)	1253615(GeneID)
16765424(GI)	WP_000973708(refSeq)
AAL20998(EMBL-CDS)	STM2094(Ensembl)
RMLC_SALTY(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (PTHR21047)
PANTHER Subfamily:	THYMIDINE DIPHOSPHO-4-KETO-RHAMNOSE 3,5-EPIMERASE (PTHR21047:SF2)
PANTHER GO-slim Molecular Function:	isomerase activity
PANTHER GO-slim Biological Process:	polysaccharide biosynthetic process
PANTHER GO-slim Cellular Component:	cytosol
PANTHER protein class:	epimerase/racemase

Pathway Categories:

O-antigen biosynthesis

dTDP-4-dehydrorhamnose 3,5-epimerase

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	dTDP-4-dehydrorhamnose 3,5-epimerase activity, isomerase activity
GO BP Complete:	O antigen biosynthetic process, extracellular polysaccharide biosynthetic process, lipopolysaccharide biosynthetic process, dTDP-rhamnose biosynthetic process
GO CC Complete:	cytosol

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
CAEEL\|WormBase=WBGene00015781\|UniProtKB=Q17993	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00027570\|UniProtKB=A8WYZ2	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00107641\|UniProtKB=A0A2A6C5G2	Pristionchus pacificus	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_15110\|UniProtKB=F4PFK6	Batrachochytrium dendrobatidis	LDO
TRIV3\|Gene_ORFName=TVAG_401850\|UniProtKB=A2DHU3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_340730\|UniProtKB=A2DTN2	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_313960\|UniProtKB=A2EKJ4	Trichomonas vaginalis	LDO
KORCO\|EnsemblGenome=Kcr_0848\|UniProtKB=B1L565	Korarchaeum cryptofilum	LDO
SACS2\|EnsemblGenome=SSO1923\|UniProtKB=Q97X30	Sulfolobus solfataricus	LDO
SACS2\|EnsemblGenome=SSO0833\|UniProtKB=Q7LXE5	Sulfolobus solfataricus	LDO
METAC\|EnsemblGenome=MA_3780\|UniProtKB=Q8TJK4	Methanosarcina acetivorans	LDO
METAC\|EnsemblGenome=MA_1909\|UniProtKB=Q8TPK2	Methanosarcina acetivorans	O
CHLAA\|EnsemblGenome=Caur_1214\|UniProtKB=A9WJZ2	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO0400\|UniProtKB=Q9RJI8	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv3465\|UniProtKB=P9WH11	Mycobacterium tuberculosis	LDO
CLOBH\|Gene_OrderedLocusName=CBO2715\|UniProtKB=A5I5E9	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0321\|UniProtKB=Q8CWT5	Streptococcus pneumoniae	LDO
BACSU\|EnsemblGenome=BSU_37810\|UniProtKB=Q7WY56	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_1213\|UniProtKB=Q81GI6	Bacillus cereus	LDO
DEIRA\|EnsemblGenome=DR_A0043\|UniProtKB=Q9RZB1	Deinococcus radiodurans	LDO
GLOVI\|Gene=rfbC\|UniProtKB=Q7NNE1	Gloeobacter violaceus	LDO
LEPIN\|EnsemblGenome=LA_1659\|UniProtKB=G1UB27	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_0464\|UniProtKB=Q8AAK0	Bacteroides thetaiotaomicron	LDO
BACTN\|EnsemblGenome=BT_0828\|UniProtKB=Q8A9I7	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_1338\|UniProtKB=Q8A836	Bacteroides thetaiotaomicron	O
NEIMB\|EnsemblGenome=NMB0081\|UniProtKB=Q9K1M5	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU2082\|UniProtKB=Q74BF9	Geobacter sulfurreducens	LDO
COXBU\|EnsemblGenome=CBU_1838\|UniProtKB=Q83AP3	Coxiella burnetii	LDO
SHEON\|Gene_OrderedLocusName=SO_3160\|UniProtKB=Q8ECI2	Shewanella oneidensis	LDO
XANCP\|EnsemblGenome=XCC0623\|UniProtKB=H9L4N6	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA5164\|UniProtKB=Q9HU21	Pseudomonas aeruginosa	LDO
ECOLI\|EnsemblGenome=BAA15880\|UniProtKB=P37745	Escherichia coli	LDO