PANTHER Gene Information   
Gene Symbol(s): sqd
Organism: Drosophila melanogaster
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Gene Name: RNA-binding protein squid
Gene ID: FBgn0263396
Protein ID: Q08473
Persistent Id: PTN002551910
Alternate Ids:
41666(GeneID) Q9VFT6(AltAccession)
HNRNP 40(Synonym) FBgn0263396(FlyBase)
X62637(EMBL) sqd(Symbol)
24646609(GI) AAB26989(EMBL-CDS)
FBgn0263396(Ensembl) SQD_DROME(UniProtKB-ID)
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PANTHER Classification
PANTHER Family: RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN (PTHR48033)
PANTHER Subfamily: RNA-BINDING PROTEIN SQUID (PTHR48033:SF10)  
PANTHER GO-slim Molecular Function: RNA binding
PANTHER GO-slim Biological Process: regulation of gene expression
PANTHER GO-slim Cellular Component: chromatin
nucleoplasm
PANTHER protein class: RNA metabolism protein
Pathway Categories: No pathway information available
GO MF Complete: RNA binding, mRNA 3'-UTR binding
GO BP Complete: germarium-derived egg chamber formation, intracellular mRNA localization, follicle cell of egg chamber migration, dorsal/ventral axis specification, ovarian follicular epithelium, mRNA splicing, via spliceosome, oocyte anterior/posterior axis specification, dorsal/ventral pattern formation, mRNA export from nucleus, pole plasm mRNA localization, RNA export from nucleus, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of alternative mRNA splicing, via spliceosome, oogenesis, pole plasm oskar mRNA localization, regulation of gene expression, negative regulation of RNA splicing, negative regulation of translation, oocyte microtubule cytoskeleton organization, oocyte localization involved in germarium-derived egg chamber formation
GO CC Complete: nucleus, polytene chromosome puff, omega speckle, catalytic step 2 spliceosome, cytoplasm, precatalytic spliceosome, chromatin, nucleoplasm
Reactome Pathways: AUF1 (hnRNP D0) binds and destabilizes mRNA, Processing of Capped Intron-Containing Pre-mRNA, Regulation of mRNA stability by proteins that bind AU-rich elements, mRNA Splicing, Metabolism of RNA, mRNA Splicing - Major Pathway