PANTHER Gene Information

Gene Symbol(s):

Fcf1

Organism:

Rattus norvegicus

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Gene Name:

FCF1 rRNA-processing protein

Gene ID:

1310899

Protein ID:

Q1RP75

Persistent Id:

PTN000276018

Alternate Ids:

299198(GeneID)	NP_001037700(refSeq)
95102022(GI)	Q1RP75_RAT(UniProtKB-ID)
ENSRNOG00000004723(Ensembl)	BAE94255(EMBL-CDS)
Q1RP75(Synonym)	ENSRNOT00000006297(Ensembl_TRS)
ENSRNOP00000006297(Ensembl_PRO)	AB256045(EMBL)
1310899(RGD)
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PANTHER Classification

PANTHER Family:	RRNA-PROCESSING PROTEIN UTP23 HOMOLOG (PTHR12416)
PANTHER Subfamily:	RRNA-PROCESSING PROTEIN FCF1 HOMOLOG (PTHR12416:SF2)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	small-subunit processome nucleolus
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	biological_process, endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), ribosomal small subunit biogenesis, endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO CC Complete:	small-subunit processome, nucleolus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

rRNA processing, Major pathway of rRNA processing in the nucleolus and cytosol, Metabolism of RNA, rRNA processing in the nucleus and cytosol

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000051047.1\|UniProtKB=A0A2I3SA86	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000024575.2\|UniProtKB=A0A2I2YBA1	Gorilla gorilla gorilla	O
HUMAN\|HGNC=20220\|UniProtKB=Q9Y324	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000006540.5\|UniProtKB=H2Q8L8	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000022126.2\|UniProtKB=G3RMJ2	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000039812.1\|UniProtKB=A0A2I2YLU1	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000016318.3\|UniProtKB=G3RJM1	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000008887.4\|UniProtKB=H9FV66	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1920986\|UniProtKB=Q9CTH6	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000039218.3\|UniProtKB=A0A3Q1LP15	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000020381\|UniProtKB=Q32PD0	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000039202.3\|UniProtKB=A0A4X1TD48	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000008261.3\|UniProtKB=F6U6H0	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000008261.3\|UniProtKB=F6U6H0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000027990.3\|UniProtKB=A0A2I2U046	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000022753.4\|UniProtKB=M3XA89	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845026155.1\|UniProtKB=A0A8I3Q8V1	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845024815.1\|UniProtKB=A0A8I3S4W9	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845018125.1\|UniProtKB=A0A8I3S320	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845014562.1\|UniProtKB=A0A8I3NWW3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000006179.4\|UniProtKB=F7B4X9	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000039099.1\|UniProtKB=A0A6I8PDE4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010005989.1\|UniProtKB=A0A1L1RUD3	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000037262.1\|UniProtKB=A0A803TNG1	Anolis carolinensis	LDO
XENLA\|Gene=fcf1.S\|UniProtKB=A0A8J0TPE7	Xenopus laevis	LDO
XENLA\|Gene=fcf1.L\|UniProtKB=Q6NUA5	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-968525\|UniProtKB=Q6DIE8	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000016654.2\|UniProtKB=H2MQ27	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-050417-67\|UniProtKB=Q568H9	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000010728.1\|UniProtKB=W5MXN1	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000018434.1\|UniProtKB=H2XQ81	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118421456\|UniProtKB=A0A9J7MYE8	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC115918076\|UniProtKB=A0A7M7HPL1	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00009266\|UniProtKB=Q93638	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00042591\|UniProtKB=A8WKU3	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00273898\|UniProtKB=A0A2A6B7T2	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0010520\|UniProtKB=Q9VL75	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP009504\|UniProtKB=A0A1S4H1C5	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC032943\|UniProtKB=A0A139WK13	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_205578\|UniProtKB=E9FSH6	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW012131\|UniProtKB=B7QAJ0	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG72148\|UniProtKB=T1G0W5	helobdella robusta	LDO
TRIAD\|EnsemblGenome=TriadG26135\|UniProtKB=B3S0V1	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_33204\|UniProtKB=A9V452	Monosiga brevicollis	LDO
YEAST\|SGD=S000002747\|UniProtKB=Q05498	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AEL102W\|UniProtKB=Q757W4	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000182246\|UniProtKB=Q59MK3	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E23386g\|UniProtKB=Q6C4V5	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_10865\|UniProtKB=C8V372	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G03340\|UniProtKB=Q4WI24	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU04159\|UniProtKB=Q1K7K3	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_03075\|UniProtKB=A7ECN6	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_03884\|UniProtKB=Q0UWI0	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC32H8.04c\|UniProtKB=O13610	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00772\|UniProtKB=B6JWJ6	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNE03760\|UniProtKB=Q5KGF9	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_00615\|UniProtKB=A0A0D1D1D6	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_01848\|UniProtKB=E3JT28	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_21718\|UniProtKB=F4NUW6	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_056460\|UniProtKB=C4M6Z5	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0267606\|UniProtKB=Q55GM5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_86906\|UniProtKB=F0ZEN0	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_19_1210\|UniProtKB=Q4QD94	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.61.0490\|UniProtKB=Q387T3	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_10459\|UniProtKB=A8B755	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_320180\|UniProtKB=A2DQG6	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0818400\|UniProtKB=C0H4V7	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00018023001\|UniProtKB=A0DKY9	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00037892001\|UniProtKB=A0CF86	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_36979\|UniProtKB=B8CA74	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G5E0_PHYRM\|UniProtKB=H3G5E0	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_16g679450v5\|UniProtKB=A0A2K3CV57	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_20G00580\|UniProtKB=A0A0K9PMX8	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g21960\|UniProtKB=A0A804ISG3	Musa acuminata subsp. malaccensis	LDO
MUSAM\|EnsemblGenome=Ma05_g11390\|UniProtKB=A0A804J3B0	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_007249mg\|UniProtKB=K3XZ90	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3010G046300\|UniProtKB=C5Z4F8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb376330\|UniProtKB=B4FS24	Zea mays	LDO
MAIZE\|EnsemblGenome=Zm00001eb376200\|UniProtKB=A0A804R034	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb376230\|UniProtKB=A0A804R0G2	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb376270\|UniProtKB=A0A804R0W8	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb376300\|UniProtKB=A0A804R0U3	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os06g0158600\|UniProtKB=Q5VMX2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g48740v3\|UniProtKB=I1H0U7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0654170\|UniProtKB=F2EB09	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7B02G014700\|UniProtKB=A0A3B6SBP2	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G113200\|UniProtKB=A0A3B6TE95	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS7A02G117600\|UniProtKB=A0A3B6RDI8	Triticum aestivum	LDO
NELNU\|Gene=LOC104606308\|UniProtKB=A0A1U8B2A5	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110790211\|UniProtKB=A0A9R0JXZ1	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0820501\|UniProtKB=A0A251RUD1	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400170420\|UniProtKB=A0A9R1XKU0	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014221mg\|UniProtKB=A0A022QWB4	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014167mg\|UniProtKB=A0A022RJ72	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_11042\|UniProtKB=A0A2G3A3W9	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG402002606\|UniProtKB=M0ZRV1	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107762120\|UniProtKB=A0A1S3X7R2	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi15g04598\|UniProtKB=F6I624	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_E00082\|UniProtKB=A0A059C017	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00037262001\|UniProtKB=A0A078GPS7	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00074034001\|UniProtKB=A0A078HWD3	Brassica napus	LDO
BRANA\|Gene_ORFName=GSBRNA2T00045389001\|UniProtKB=A0A078JC57	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra004554\|UniProtKB=M4CK20	Brassica campestris	O
BRACM\|EnsemblGenome=Bra039285\|UniProtKB=M4FDW4	Brassica campestris	LDO
ARATH\|TAIR=locus=2197885\|UniProtKB=F4HP91	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2062902\|UniProtKB=O82346	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107909765\|UniProtKB=A0A1U8JX86	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107922808\|UniProtKB=A0A1U8L1H4	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_005228\|UniProtKB=A0A061E0N1	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g029148mg\|UniProtKB=A0A067H615	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_002G166200v3\|UniProtKB=A0A2K2BJX0	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_014G092600v3\|UniProtKB=B9I8S4	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_11G086700\|UniProtKB=A0A2C9UZC9	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1447280\|UniProtKB=B9RH52	Ricinus communis	LDO
RICCO\|Gene_ORFName=RCOM_1445560\|UniProtKB=B9RH01	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_19G251700\|UniProtKB=A0A0R0ET54	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_03G254200\|UniProtKB=A0A0R0KUF4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_12G191100\|UniProtKB=I1LU28	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_6g086290\|UniProtKB=G7KNI1	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_7g116720\|UniProtKB=G7L309	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr07_07870\|UniProtKB=A0A2I4G2P4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G821570\|UniProtKB=A0A0A0LEW8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G181300\|UniProtKB=M5X2D5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_158231\|UniProtKB=D8STW7	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_91292\|UniProtKB=D8RE63	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c11_12810\|UniProtKB=A9RIF1	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c7_15560\|UniProtKB=A9T238	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0007s0029\|UniProtKB=A0A2R6XN81	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003460050\|UniProtKB=A0A1Y1I8L9	Klebsormidium nitens	LDO
KORCO\|EnsemblGenome=Kcr_1340\|UniProtKB=B1L6K7	Korarchaeum cryptofilum	O
METJA\|EnsemblGenome=MJ_1320\|UniProtKB=Q58716	Methanocaldococcus jannaschii	O
THEKO\|EnsemblGenome=TK1945\|UniProtKB=Q5JDL4	Thermococcus kodakaraensis	O