PANTHER Gene Information

Gene Symbol(s):

CSP4

Organism:

Arabidopsis thaliana

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Gene Name:

Cold shock domain-containing protein 4

Gene ID:

2047092

Protein ID:

Q38896

Persistent Id:

PTN001356114

Alternate Ids:

NM_127676(refSeq)	CSP4_ARATH(UniProtKB-ID)
AC006264(EMBL)	AAX22277(EMBL-CDS)
CSP4(Synonym)	Q5BIT2(AltAccession)
AT2G21060(Ensembl_TRS)	CSP4(Symbol)
AT2G21060(Ensembl_PRO)	locus:2047092(TAIR)
15226451(GI)	816641(GeneID)
AT2G21060(Ensembl)
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PANTHER Classification

PANTHER Family:	COLD SHOCK DOMAIN PROTEIN 2 (PTHR46565)
PANTHER Subfamily:	COLD SHOCK DOMAIN-CONTAINING PROTEIN 4 (PTHR46565:SF20)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, mRNA binding
GO BP Complete:	response to cold, fruit development, embryo development ending in seed dormancy
GO CC Complete:	nucleus, cytosol

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
DAPPU\|EnsemblGenome=DAPPUDRAFT_314649\|UniProtKB=E9G716	Daphnia pulex	LDO
LEIMA\|EnsemblGenome=LMJF_28_0825\|UniProtKB=Q4Q8I6	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb11.02.5770\|UniProtKB=Q384M8	Trypanosoma brucei	LDO
AMBTC\|EnsemblGenome=AMTR_s00041p00167350\|UniProtKB=W1Q0D7	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00017p00206510\|UniProtKB=W1PKT5	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_1G03220\|UniProtKB=A0A0K9PMZ2	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_32G00500\|UniProtKB=A0A0K9P8C9	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma03_g12400\|UniProtKB=A0A804IBA0	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g22250\|UniProtKB=A0A804ISK1	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g26620\|UniProtKB=A0A804IU76	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma10_g10640\|UniProtKB=A0A804KUS8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma01_g11830\|UniProtKB=A0A804HT19	Musa acuminata subsp. malaccensis	LDO
SORBI\|EnsemblGenome=SORBI_3006G228000\|UniProtKB=C5YGM9	Sorghum bicolor	O
ORYSJ\|EnsemblGenome=Os01g0546250\|UniProtKB=A2ZU70	Oryza sativa	O
ORYSJ\|EnsemblGenome=Os05g0524666\|UniProtKB=A0A0P0WPY9	Oryza sativa	O
ORYSJ\|EnsemblGenome=Os08g0129200\|UniProtKB=Q84UR8	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_2g07090v3\|UniProtKB=I1HDB3	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0065530\|UniProtKB=A0A8I6WKB0	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS1B02G273000\|UniProtKB=A0A3B5Z0A0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G262500\|UniProtKB=A0A3B5ZW34	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G273100\|UniProtKB=Q75QN9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G262400\|UniProtKB=A0A3B5Y2W1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G262400\|UniProtKB=A0A3B5ZW36	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G262500\|UniProtKB=A0A3B5Y1S1	Triticum aestivum	O
BRADI\|EnsemblGenome=BRADI_1g02650v3\|UniProtKB=A0A0Q3KMD2	Brachypodium distachyon	O
SORBI\|EnsemblGenome=SORBI_3004G018200\|UniProtKB=C5XT02	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb208310\|UniProtKB=C0PLI2	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0121100\|UniProtKB=Q6YUR8	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g01960v3\|UniProtKB=I1HWJ1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0549580\|UniProtKB=F2DGP2	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6A02G069500\|UniProtKB=A0A3B6NKE4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G067500\|UniProtKB=A0A3B6QC70	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G093900\|UniProtKB=A0A3B6PF71	Triticum aestivum	LDO
NELNU\|Gene=LOC104606944\|UniProtKB=A0A1U8Q7X3	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_013882\|UniProtKB=A0A1U8AXN6	Nelumbo nucifera	O
NELNU\|Gene=LOC104609679\|UniProtKB=A0A1U8B119	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_023879\|UniProtKB=A0A1U8AMI5	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110801200\|UniProtKB=A0A9R0J7A8	Spinacia oleracea	O
SPIOL\|Gene=LOC110778565\|UniProtKB=A0A9R0HXX9	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr16g0531371\|UniProtKB=A0A251S3Q0	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr16g0776691\|UniProtKB=A0A9K3DXH1	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr15g0700431\|UniProtKB=A0A251SA02	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C400213380\|UniProtKB=A0A9R1VT13	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C300129710\|UniProtKB=A0A9R1W0Z4	Lactuca sativa	O
CAPAN\|EnsemblGenome=T459_06218\|UniProtKB=A0A2G3AA58	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400003568\|UniProtKB=M0ZVR3	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc02g083800.3\|UniProtKB=A0A3Q7FU76	Solanum lycopersicum	O
TOBAC\|Gene=LOC107760151\|UniProtKB=A0A1S3X1F5	Nicotiana tabacum	O
TOBAC\|Gene=LOC107772609\|UniProtKB=A0A1S3Y684	Nicotiana tabacum	O
CAPAN\|EnsemblGenome=T459_11527\|UniProtKB=A0A1U8GKP2	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400046044\|UniProtKB=M1DYI6	Solanum tuberosum	O
TOBAC\|Gene=LOC107804271\|UniProtKB=A0A1S4B4A0	Nicotiana tabacum	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0805811\|UniProtKB=A0A251RR71	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0793751\|UniProtKB=A0A251RNL2	Helianthus annuus	O
HELAN\|Gene_ORFName=HannXRQ_Chr04g0112791\|UniProtKB=A0A251UYY0	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr15g0691561\|UniProtKB=A0A9K3H207	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr04g0167081\|UniProtKB=A0A9K3J7J8	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0439281\|UniProtKB=A0A251TLK4	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800439570\|UniProtKB=A0A9R1UN25	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C300120050\|UniProtKB=A0A9R1W075	Lactuca sativa	LDO
CAPAN\|EnsemblGenome=T459_25543\|UniProtKB=A0A2G2YL31	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400023206\|UniProtKB=M1C4L6	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc10g055250.1\|UniProtKB=A0A3Q7IIE9	Solanum lycopersicum	LDO
CAPAN\|EnsemblGenome=T459_02924\|UniProtKB=A0A2G3ALE0	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_32116\|UniProtKB=A0A2G2Y2P2	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400046716\|UniProtKB=M1E004	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400013471\|UniProtKB=M1B1P9	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400001591\|UniProtKB=M0ZMR9	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400001590\|UniProtKB=M0ZMR8	Solanum tuberosum	O
TOBAC\|Gene=LOC107832297\|UniProtKB=A0A1S4DQ97	Nicotiana tabacum	O
TOBAC\|Gene=LOC107810166\|UniProtKB=A0A1S4BNE9	Nicotiana tabacum	O
TOBAC\|Gene=LOC107816435\|UniProtKB=A0A1S4C953	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107832840\|UniProtKB=A0A1S4DS18	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi04g01469\|UniProtKB=F6GWM3	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi03g00121\|UniProtKB=F6I111	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_L00773\|UniProtKB=A0A058ZWV8	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00090290001\|UniProtKB=A0A078FS13	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra030325\|UniProtKB=A0A3P6CRA6	Brassica campestris	LDO
BRANA\|Gene_ORFName=GSBRNA2T00019459001\|UniProtKB=A0A078J2H5	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A09P58550.1\|UniProtKB=A0A078FNA6	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra031159\|UniProtKB=A0A397Y3F6	Brassica campestris	LDO
GOSHI\|Gene=LOC107916754\|UniProtKB=A0A1U8KGL6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107950077\|UniProtKB=A0A1U8NMT8	Gossypium hirsutum	O
GOSHI\|Gene=LOC107955973\|UniProtKB=A0A1U8P7N5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107899826\|UniProtKB=A0A1U8ISL1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107927849\|UniProtKB=A0A1U8LMQ5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107908662\|UniProtKB=A0A1U8JRL1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107916639\|UniProtKB=A0A1U8KG99	Gossypium hirsutum	O
GOSHI\|Gene=LOC107936959\|UniProtKB=A0A1U8MI11	Gossypium hirsutum	O
GOSHI\|Gene=LOC107922149\|UniProtKB=A0A1U8KYM0	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107922150\|UniProtKB=A0A1U8L2C8	Gossypium hirsutum	O
POPTR\|EnsemblGenome=POPTR_009G132000v3\|UniProtKB=A0A2K1Z798	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_004G172600v3\|UniProtKB=B9H173	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_06G054200\|UniProtKB=A0A2C9VPG7	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0237690\|UniProtKB=B9T6B7	Ricinus communis	O
MANES\|EnsemblGenome=MANES_11G093000\|UniProtKB=A0A2C9UZX5	Manihot esculenta	LDO
MANES\|EnsemblGenome=MANES_04G076800\|UniProtKB=A0A2C9W1V4	Manihot esculenta	O
SOYBN\|EnsemblGenome=GLYMA_02G047500\|UniProtKB=K7K6H1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G127200\|UniProtKB=K7MH03	Glycine max	O
JUGRE\|Gene=LOC108997722\|UniProtKB=A0A2I4FDB6	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_3G002765\|UniProtKB=A0A0A0L4X7	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_7G169300\|UniProtKB=A0A251NCM7	Prunus persica	O
SOYBN\|EnsemblGenome=GLYMA_11G105900\|UniProtKB=A0A0R0HF66	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G004900\|UniProtKB=I1JSF3	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_08G150600\|UniProtKB=A0A0R0ITV8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_12G030800\|UniProtKB=I1LPN7	Glycine max	O
JUGRE\|EnsemblGenome=Jr13_08810\|UniProtKB=A0A2I4EWV6	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr16_16550\|UniProtKB=A0A2I4GC17	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_7G010300\|UniProtKB=A0A0A0K4M5	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_8G163000\|UniProtKB=A0A251MYP5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_187582\|UniProtKB=D8TDR7	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_451445\|UniProtKB=D8QY76	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_58801\|UniProtKB=D8RTW2	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_186937\|UniProtKB=D8TAT6	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_154869\|UniProtKB=D8SF43	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_123455\|UniProtKB=D8SRQ0	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c5_7920\|UniProtKB=A9SBU8	Physcomitrella patens	LDO
PHYPA\|EnsemblGenome=Pp3c5_7880\|UniProtKB=A0A7I4DVH3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c6_23240\|UniProtKB=A0A2K1KGT1	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0005s0203\|UniProtKB=A0A2R6XR48	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000340370\|UniProtKB=A0A1Y1HLZ4	Klebsormidium nitens	LDO
KLENI\|Gene_ORFName=KFL_000620140\|UniProtKB=A0A1Y1HQ80	Klebsormidium nitens	O