PANTHER Gene Information

Gene Symbol(s):

Sf3a3

Organism:

Rattus norvegicus

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Gene Name:

Splicing factor 3a, subunit 3

Gene ID:

1308726

Protein ID:

Q4KLI7

Persistent Id:

PTN000300270

Alternate Ids:

68533853(GI)	ENSRNOG00000007629(Ensembl)
Q4KLI7_RAT(UniProtKB-ID)	NP_001020869(refSeq)
313583(GeneID)	1308726(RGD)
ENSRNOP00000010373(Ensembl_PRO)	ENSRNOT00000010373(Ensembl_TRS)
BC099183(EMBL)	Q4KLI7(Synonym)
AAH99183(EMBL-CDS)
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PANTHER Classification

PANTHER Family:	SPLICING FACTOR SF3A-RELATED (PTHR12786)
PANTHER Subfamily:	SPLICING FACTOR 3A SUBUNIT 3 (PTHR12786:SF2)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	spliceosomal complex
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, RNA binding
GO BP Complete:	U2-type prespliceosome assembly, mRNA processing, mRNA splicing, via spliceosome
GO CC Complete:	nucleus, catalytic step 2 spliceosome, nuclear speck, spliceosomal complex, U2-type spliceosomal complex, U2-type precatalytic spliceosome, U2 snRNP, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Processing of Capped Intron-Containing Pre-mRNA, mRNA Splicing - Major Pathway, Metabolism of RNA, mRNA Splicing

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000046013.1\|UniProtKB=A0A2I3RXK5	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000022611.2\|UniProtKB=G3RWU8	Gorilla gorilla gorilla	O
HUMAN\|HGNC=10767\|UniProtKB=Q12874	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000000559.5\|UniProtKB=G2HJ63	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000039466.1\|UniProtKB=A0A2I2ZVC1	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000013928.3\|UniProtKB=A0A2I2YA81	Gorilla gorilla gorilla	LDO
MOUSE\|MGI=MGI=1922312\|UniProtKB=Q9D554	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000007299.3\|UniProtKB=Q3SWY7	Bos taurus	LDO
HORSE\|Ensembl=ENSECAG00000017333.4\|UniProtKB=A0A3Q2H6Z9	Equus caballus	LDO
CANLF\|Ensembl=ENSCAFG00845030327.1\|UniProtKB=E2QXU5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000024045.1\|UniProtKB=F6YNL2	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000017729.4\|UniProtKB=F7ELE8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000002473.3\|UniProtKB=F6WAQ0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010013215.1\|UniProtKB=Q5F387	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000017058.3\|UniProtKB=H9GNY9	Anolis carolinensis	LDO
XENLA\|Gene=sf3a3.S\|UniProtKB=Q5U561	Xenopus laevis	O
XENLA\|Gene=sf3a3.L\|UniProtKB=A0A8J0U6W5	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-947674\|UniProtKB=F7DSS2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000008175.2\|UniProtKB=H2LVY2	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040908-1\|UniProtKB=Q6DRK2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000003273.1\|UniProtKB=W5M667	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000002730.3\|UniProtKB=F6TPA2	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118423160\|UniProtKB=A0A9J7N271	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC576681\|UniProtKB=A0A7M7PFY2	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00011758\|UniProtKB=Q22469	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00027364\|UniProtKB=A8WYD7	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00112366\|UniProtKB=A0A2A6D3A4	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0014366\|UniProtKB=O46106	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003085\|UniProtKB=Q7QBN1	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC001034\|UniProtKB=D6W9Q6	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_216576\|UniProtKB=E9H9F5	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW010835\|UniProtKB=B7Q8E4	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG68394\|UniProtKB=T1FZE0	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g142815\|UniProtKB=A7T279	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG25606\|UniProtKB=B3RXQ8	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_17466\|UniProtKB=A9URU6	Monosiga brevicollis	LDO
YEAST\|SGD=S000002188\|UniProtKB=P19736	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AEL085W\|UniProtKB=Q757U7	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000180558\|UniProtKB=A0A1D8PNA1	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F09493g\|UniProtKB=Q6C2A2	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_08015\|UniProtKB=Q5AUL5	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_5G02420\|UniProtKB=Q4WEB5	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01235\|UniProtKB=Q1K820	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_06434\|UniProtKB=A7EM87	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_11135\|UniProtKB=Q0UAS9	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC36.09\|UniProtKB=O59706	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00577\|UniProtKB=B6JW10	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNC06350\|UniProtKB=Q5KJJ3	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06130\|UniProtKB=A0A0D1DTY9	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_07623\|UniProtKB=E3KCS4	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_20507\|UniProtKB=F4P8T8	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_038600\|UniProtKB=C4LZP4	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0270020\|UniProtKB=Q55CK7	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_28986\|UniProtKB=F0ZCR9	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_30_1830\|UniProtKB=Q4Q7B2	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.6.3160\|UniProtKB=Q584V9	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_13464\|UniProtKB=A8BBX4	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_388660\|UniProtKB=A2DYJ8	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0924700\|UniProtKB=Q8I2R0	Plasmodium falciparum	LDO
PHYRM\|Gene=H3GTC8_PHYRM\|UniProtKB=H3GTC8	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_06g297750v5\|UniProtKB=A0A2K3DQQ7	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00021p00243200\|UniProtKB=W1Q0M4	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_65G01030\|UniProtKB=A0A0K9NSM5	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g16610\|UniProtKB=A0A804IQG1	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_001134mg\|UniProtKB=K3XGW3	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G102100\|UniProtKB=C5Y9P9	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3003G258900\|UniProtKB=C5XGS1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb156600\|UniProtKB=B4FL42	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0717600\|UniProtKB=Q10DW3	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g58172v3\|UniProtKB=I1IEX6	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0280610\|UniProtKB=A0A8I6XF02	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G321900\|UniProtKB=A0A3B6TTB9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G325300\|UniProtKB=A0A3B6RKU9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G226000\|UniProtKB=A0A3B6SI90	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G299500\|UniProtKB=W5CWG7	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G266200\|UniProtKB=A0A3B6EJX5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G266300\|UniProtKB=A0A3B6GUT4	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_006912\|UniProtKB=A0A1U8ATP9	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110781266\|UniProtKB=A0A9R0JNE9	Spinacia oleracea	O
SPIOL\|Gene=LOC110783091\|UniProtKB=A0A9R0I5V7	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr09g0252971\|UniProtKB=A0A251TVZ0	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0384061\|UniProtKB=A0A9K3N7U1	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0384041\|UniProtKB=A0A9K3N861	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900480240\|UniProtKB=A0A9R1UEW6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a020116mg\|UniProtKB=A0A022QC64	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_09587\|UniProtKB=A0A1U8FZ32	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400009079\|UniProtKB=M1AID5	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc03g083430.3\|UniProtKB=A0A3Q7FN63	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107765278\|UniProtKB=A0A1S3XHI6	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107796993\|UniProtKB=A0A1S4AFB0	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi16g01284\|UniProtKB=E0CVI1	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A01467\|UniProtKB=A0A059DFG3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A07P21690.1\|UniProtKB=A0A078IUQ6	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C06P21480.1\|UniProtKB=A0A078EZS4	Brassica napus	O
BRACM\|EnsemblGenome=Bra003140\|UniProtKB=M4CG08	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_A03P02600.1\|UniProtKB=A0A078FDF3	Brassica napus	O
BRACM\|EnsemblGenome=Bra005882\|UniProtKB=M4CNU4	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_C02P02610.1\|UniProtKB=A0A078FI39	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra028740\|UniProtKB=M4EIX5	Brassica campestris	LDO
ARATH\|TAIR=locus=2152855\|UniProtKB=Q9FG01	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107891758\|UniProtKB=A0A1U8I7F5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107913690\|UniProtKB=A0A1U8KA47	Gossypium hirsutum	O
GOSHI\|Gene=LOC107930276\|UniProtKB=A0A1U8LVX0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107890768\|UniProtKB=A0A1U8I4Y2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_015383\|UniProtKB=A0A061G8Z3	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g010423mg\|UniProtKB=A0A067DUS4	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_T054400v3\|UniProtKB=A0A2K1R8I7	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_012G012800v3\|UniProtKB=A0A2K1Y755	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_015G017200v3\|UniProtKB=B9IDV2	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_06G159600\|UniProtKB=A0A251KQB0	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1579390\|UniProtKB=B9RII3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_06G127500\|UniProtKB=I1KAR1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_04G236800\|UniProtKB=I1JYT2	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g091250\|UniProtKB=G7J6U4	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr16_01320\|UniProtKB=A0A2I4G488	Juglans regia	O
JUGRE\|EnsemblGenome=Jr13_29540\|UniProtKB=A0A2I4H3P3	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G603040\|UniProtKB=A0A0A0LDU3	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G260300\|UniProtKB=A0A251QLQ9	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_2G311500\|UniProtKB=M5X8R3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_104720\|UniProtKB=D8RYC0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_169846\|UniProtKB=D8RBB1	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c5_21100\|UniProtKB=A9TF74	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0116s0041\|UniProtKB=A0A2R6WB24	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000270120\|UniProtKB=A0A1Y1HMM0	Klebsormidium nitens	LDO