PANTHER Gene Information

Gene Symbol(s):

At2g43960

Organism:

Arabidopsis thaliana

View Gene in Tree


Tree	Reduced Tree

Gene Name:

At2g43960

Gene ID:

2051864

Protein ID:

Q58FX2

Persistent Id:

PTN000393398

Alternate Ids:

NM_129958(refSeq)	42569904(GI)
locus:2051864(TAIR)	Q58FX2_ARATH(UniProtKB-ID)
AAX55163(EMBL-CDS)	819001(GeneID)
AT2G43960(Ensembl)	CP002685(EMBL)
Q58FX2(Synonym)
Show All

PANTHER Classification

PANTHER Family:	SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED (PTHR15316)
PANTHER Subfamily:	SPLICING FACTOR 3A SUBUNIT 1 (PTHR15316:SF1)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	regulation of alternative mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	U2-type prespliceosome U2 snRNP catalytic step 2 spliceosome
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	mRNA cis splicing, via spliceosome
GO CC Complete:	nucleus, catalytic step 2 spliceosome, U2-type prespliceosome, U2 snRNP

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10765\|UniProtKB=Q15459	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000014240.6\|UniProtKB=H2R708	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000012631.3\|UniProtKB=G3RA68	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000005547.4\|UniProtKB=F7GEU6	Macaca mulatta	O
MOUSE\|MGI=MGI=1914715\|UniProtKB=Q8K4Z5	Mus musculus	O
RAT\|RGD=1311477\|UniProtKB=D3ZQM0	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000003390\|UniProtKB=A2VDN6	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000010002.5\|UniProtKB=A0A287ACP7	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000023962.3\|UniProtKB=A0A9L0RE97	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000011932.5\|UniProtKB=M3WG15	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845019174.1\|UniProtKB=A0A8I3PDS4	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000009270.4\|UniProtKB=F7DA32	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000049903.1\|UniProtKB=A0A6I8NID5	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010000215.1\|UniProtKB=F1NU16	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000009415.3\|UniProtKB=H9GF80	Anolis carolinensis	O
XENLA\|Gene=sf3a1.L\|UniProtKB=Q6GPA9	Xenopus laevis	O
XENLA\|Gene=LOC108707057\|UniProtKB=A0A8J0UCH1	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-6086860\|UniProtKB=A0A8J0T011	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000013050.2\|UniProtKB=H2MCR8	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030616-156\|UniProtKB=Q90X41	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000008251.1\|UniProtKB=W5MNQ5	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000008526.3\|UniProtKB=F7AI93	Ciona intestinalis	O
BRAFL\|Gene=LOC118425563\|UniProtKB=A0A9J7LX82	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC590341\|UniProtKB=A0A7M7PD72	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004188\|UniProtKB=G5ECL3	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG07063\|UniProtKB=A8X3S8	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00112215\|UniProtKB=A0A454XWC5	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0266917\|UniProtKB=Q9VEP9	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP011328\|UniProtKB=A0A1S4H6A9	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC004839\|UniProtKB=D6WB22	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_196815\|UniProtKB=E9GIY0	Daphnia pulex	O
HELRO\|EnsemblGenome=HelroG108278\|UniProtKB=T1EEI0	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g233857\|UniProtKB=A7RES3	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG19623\|UniProtKB=B3RL27	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_33566\|UniProtKB=A9V640	Monosiga brevicollis	O
YEAST\|SGD=S000003739\|UniProtKB=P32524	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AFR645W\|UniProtKB=Q752D0	Eremothecium gossypii	O
CANAL\|CGD=CAL0000181890\|UniProtKB=A0A1D8PL91	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_B21032g\|UniProtKB=Q6CDU9	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_04760\|UniProtKB=Q5B3X0	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G06440\|UniProtKB=Q4WWM9	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU01913\|UniProtKB=Q7SH93	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_04016\|UniProtKB=A7EFC5	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_00186\|UniProtKB=Q0V728	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC22A12.09c\|UniProtKB=O13900	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_04318\|UniProtKB=B6K6I5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNA01020\|UniProtKB=Q5KPZ5	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_00305\|UniProtKB=A0A0D1CFU5	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_01286\|UniProtKB=E3JV80	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_35836\|UniProtKB=F4P9S4	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0272676\|UniProtKB=Q86A14	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_153372\|UniProtKB=F0ZNQ8	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_19_1270\|UniProtKB=Q4QD88	Leishmania major	O
TRYB2\|Gene_ORFName=Tb10.61.0420\|UniProtKB=Q387S7	Trypanosoma brucei	O
LEIMA\|EnsemblGenome=LMJF_25_1400\|UniProtKB=Q4Q9V3	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.3.1140\|UniProtKB=Q57WZ5	Trypanosoma brucei	O
TRIV3\|Gene_ORFName=TVAG_285080\|UniProtKB=A2G4N8	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1474500\|UniProtKB=Q8IK93	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00005955001\|UniProtKB=A0BZY6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00014749001\|UniProtKB=A0D9V1	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_21026\|UniProtKB=B8BS45	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GGH2_PHYRM\|UniProtKB=H3GGH2	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_06g307450v5\|UniProtKB=A0A2K3DRF1	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00029p00096200\|UniProtKB=W1PN16	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_19G00240\|UniProtKB=A0A0K9PQD7	Zostera marina	O
MUSAM\|EnsemblGenome=Ma09_g12260\|UniProtKB=A0A804KIR6	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma03_g03780\|UniProtKB=A0A804I853	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_000356mg\|UniProtKB=K3XEN9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G123000\|UniProtKB=C5XGI9	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb128190\|UniProtKB=C0PG74	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb333220\|UniProtKB=A0A804QHJ5	Zea mays	O
ORYSJ\|EnsemblGenome=Os02g0245000\|UniProtKB=A0A0P0VGY6	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_2g09850v3\|UniProtKB=I1HE92	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0323810\|UniProtKB=A0A287MPL4	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3D02G510100\|UniProtKB=A0A3B6H6T4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G211900\|UniProtKB=A0A3B6FLI5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G503600\|UniProtKB=A0A3B6ESB1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G212000\|UniProtKB=A0A3B6FK82	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G566900\|UniProtKB=A0A3B6FXX4	Triticum aestivum	O
NELNU\|Gene=LOC104593542\|UniProtKB=A0A1U7ZFQ7	Nelumbo nucifera	O
HELAN\|EnsemblGenome=HanXRQr2_Chr11g0510161\|UniProtKB=A0A251TCE8	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr03g0122371\|UniProtKB=A0A251V880	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0785441\|UniProtKB=A0A9K3DEC0	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C600324650\|UniProtKB=A0A9R1V8A0	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001667mg\|UniProtKB=A0A022QIJ5	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_06000\|UniProtKB=A0A2G3A9I3	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_14400\|UniProtKB=A0A2G2ZHH5	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400007322\|UniProtKB=M1ABB0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc02g081960.3\|UniProtKB=A0A3Q7F6K5	Solanum lycopersicum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400002827\|UniProtKB=M0ZSU7	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc04g005690.3\|UniProtKB=A0A3Q7FX15	Solanum lycopersicum	O
TOBAC\|Gene=LOC107789072\|UniProtKB=A0A1S3ZPU0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107807958\|UniProtKB=A0A1S4BGC9	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi01g00161\|UniProtKB=F6HFR3	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_J00854\|UniProtKB=A0A059AC21	Eucalyptus grandis	O
BRANA\|Gene_ORFName=DARMORV10_C02P34850.1\|UniProtKB=A0A078I3W5	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00023069001\|UniProtKB=A0A078J5D0	Brassica napus	O
BRACM\|EnsemblGenome=Bra007503\|UniProtKB=M4CTG0	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00025434001\|UniProtKB=A0A078J4R9	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00016188001\|UniProtKB=A0A078G8I4	Brassica napus	O
BRACM\|EnsemblGenome=Bra032181\|UniProtKB=M4ETP9	Brassica campestris	O
BRACM\|EnsemblGenome=Bra031050\|UniProtKB=M4EQH9	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00031308001\|UniProtKB=A0A078F9B4	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00031302001\|UniProtKB=A0A078FCA7	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C02P08210.1\|UniProtKB=A0A078HJT9	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00065409001\|UniProtKB=A0A078HKH4	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C02P08200.1\|UniProtKB=A0A078HMU0	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00046624001\|UniProtKB=A0A078JFH3	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00072422001\|UniProtKB=A0A078HWE7	Brassica napus	O
BRACM\|EnsemblGenome=Bra016688\|UniProtKB=M4DJL0	Brassica campestris	O
GOSHI\|Gene=LOC107910675\|UniProtKB=A0A1U8JV36	Gossypium hirsutum	O
GOSHI\|Gene=LOC107909985\|UniProtKB=A0A1U8JSJ2	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_011316\|UniProtKB=A0A061E8Y3	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g004560mg\|UniProtKB=A0A067EU36	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_005G094600v3\|UniProtKB=B9H605	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_007G070700v3\|UniProtKB=A0A2K1ZQJ1	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_04G066600\|UniProtKB=A0A251L1V5	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0112090\|UniProtKB=B9SR88	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_15G173200\|UniProtKB=A0A0R0GC27	Glycine max	O
JUGRE\|EnsemblGenome=Jr13_04690\|UniProtKB=A0A2I4GE29	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_2G404860\|UniProtKB=A0A0A0LMI9	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_3G162200\|UniProtKB=A0A251Q258	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_3G079300\|UniProtKB=A0A251PX40	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_1G077400\|UniProtKB=M5WFQ6	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_114587\|UniProtKB=D8SDB1	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_33215\|UniProtKB=D8QRY9	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_33213\|UniProtKB=D8RIW0	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_146605\|UniProtKB=D8RF49	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c23_15260\|UniProtKB=A0A2K1IJG3	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c18_11660\|UniProtKB=A9RE34	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0053s0080\|UniProtKB=A0A2R6WWB7	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001090140\|UniProtKB=A0A1Y1HUQ5	Klebsormidium nitens	O