PANTHER Gene Information

Gene Symbol(s):

DL3925W

Organism:

Arabidopsis thaliana

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Gene Name:

60S ribosome subunit biogenesis protein NIP7 homolog

Gene ID:

2130704

Protein ID:

Q6NM52

Persistent Id:

PTN001158575

Alternate Ids:

NP_193312(refSeq)	311822970(GI)
locus:2130704(TAIR)	Q6NM52_ARATH(UniProtKB-ID)
AAS76220(EMBL-CDS)	AT4G15770(Ensembl)
Q6NM52(Synonym)	CP002687(EMBL)
827257(GeneID)
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PANTHER Classification

PANTHER Family:	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 (PTHR23415)
PANTHER Subfamily:	60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 HOMOLOG (PTHR23415:SF4)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	ribosomal large subunit biogenesis
PANTHER GO-slim Cellular Component:	preribosome, large subunit precursor nucleolus
PANTHER protein class:	scaffold/adaptor protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	protein binding
GO BP Complete:	ribosomal large subunit biogenesis, ribosome assembly
GO CC Complete:	nucleus, nucleolus, preribosome, large subunit precursor

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000051330.1\|UniProtKB=A0A2I3T2G3	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000007747.3\|UniProtKB=A0A2I2ZDJ8	Gorilla gorilla gorilla	O
HUMAN\|HGNC=24328\|UniProtKB=Q9Y221	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000051089.1\|UniProtKB=G2HH83	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000022785.2\|UniProtKB=G3RX93	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000016635.4\|UniProtKB=H9FVH2	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1913414\|UniProtKB=Q9CXK8	Mus musculus	LDO
RAT\|RGD=620069\|UniProtKB=Q9WV50	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000051757.1\|UniProtKB=A0A3Q1NH17	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000001666.5\|UniProtKB=E1BC14	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000033741\|UniProtKB=Q56P27	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000036727.3\|UniProtKB=A0A3Q2H0H6	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000013574.6\|UniProtKB=A0A2I2UCI4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845002085.1\|UniProtKB=A0A8I3MK34	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845009683.1\|UniProtKB=A0A8I3N227	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000002782.2\|UniProtKB=F6YGD8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000046881.1\|UniProtKB=A0A6I8NN20	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010008219.1\|UniProtKB=A0A8V0Y567	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000003476.4\|UniProtKB=H9G7K1	Anolis carolinensis	LDO
XENLA\|Gene=nip7\|UniProtKB=Q6DFH9	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1005412\|UniProtKB=A4QND5	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011734.2\|UniProtKB=A0A3B3II55	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-050522-256\|UniProtKB=Q503P2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000001379.1\|UniProtKB=W5LZK7	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000006610.3\|UniProtKB=F6QQ08	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118430387\|UniProtKB=A0A9J7MAS5	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC579986\|UniProtKB=A0A7M7NHF6	Strongylocentrotus purpuratus	LDO
STRPU\|EnsemblGenome=LOC115918249\|UniProtKB=A0A7M7NYB2	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00016607\|UniProtKB=P91154	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00033171\|UniProtKB=A8XF19	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00099280\|UniProtKB=A0A2A6BV92	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0039233\|UniProtKB=Q9VC28	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP002330\|UniProtKB=Q7QBV7	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC006900\|UniProtKB=D7GXI8	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_300325\|UniProtKB=E9G537	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW024289\|UniProtKB=B7PE66	Ixodes scapularis	LDO
IXOSC\|EnsemblGenome=ISCW024297\|UniProtKB=B7PFN8	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG73217\|UniProtKB=T1G1B9	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g244907\|UniProtKB=A7SFI9	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG50432\|UniProtKB=B3S050	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_34642\|UniProtKB=A9VD13	Monosiga brevicollis	LDO
YEAST\|SGD=S000006132\|UniProtKB=Q08962	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFL104W\|UniProtKB=Q755C7	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000185986\|UniProtKB=A0A1D8PPW6	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E34287g\|UniProtKB=F2Z5Z4	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_08491\|UniProtKB=Q5AT89	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G17060\|UniProtKB=E9QUX5	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU00105\|UniProtKB=Q7RYM3	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_09681\|UniProtKB=A7EWH2	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_16411\|UniProtKB=Q0TVT1	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC320.11c\|UniProtKB=Q1MTQ9	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_01839\|UniProtKB=B6JZ17	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNB05550\|UniProtKB=Q5KLE6	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_05683\|UniProtKB=A0A0D1CIY5	Ustilago maydis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_29210\|UniProtKB=F4NV05	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_017890\|UniProtKB=B1N5A1	Entamoeba histolytica	LDO
ENTH1\|EnsemblGenome=CL6EHI_031350\|UniProtKB=C4M4L2	Entamoeba histolytica	LDO
ENTH1\|Gene_ORFName=EHI_038310\|UniProtKB=B1N2Y4	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0295477\|UniProtKB=B0G104	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_41643\|UniProtKB=F1A0G9	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_33_1350\|UniProtKB=Q4Q453	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.389.1790\|UniProtKB=Q389E3	Trypanosoma brucei	LDO
GIAIC\|Gene_ORFName=GL50803_006177\|UniProtKB=A0A644FBH1	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_066780\|UniProtKB=A2DS94	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1466700\|UniProtKB=Q8IKH0	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00035960001\|UniProtKB=A0C7R2	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00008039001\|UniProtKB=A0CL25	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_39003\|UniProtKB=B8BPY5	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G8T4_PHYRM\|UniProtKB=H3G8T4	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g528900v5\|UniProtKB=A8J593	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00057p00214920\|UniProtKB=U5CUM1	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_113G00520\|UniProtKB=A0A0K9Q2Z5	Zostera marina	LDO
SETIT\|EnsemblGenome=SETIT_031205mg\|UniProtKB=K3ZX73	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G325200\|UniProtKB=C5XUB8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb257450\|UniProtKB=B4FKM9	Zea mays	LDO
SETIT\|EnsemblGenome=SETIT_037165mg\|UniProtKB=K4AE58	Setaria italica	LDO
ORYSJ\|EnsemblGenome=Os07g0670600\|UniProtKB=Q8H478	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g18250v3\|UniProtKB=I1GRA7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0113730\|UniProtKB=F2DWT3	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS1B02G178100\|UniProtKB=A0A3B5YW45	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G241600\|UniProtKB=A0A3B6DCI3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G191100\|UniProtKB=A0A3B6NPP0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2A02G114300\|UniProtKB=W5BKZ9	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_012209\|UniProtKB=A0A1U8B0U9	Nelumbo nucifera	LDO
NELNU\|Gene_ORFName=HUJ06_004222\|UniProtKB=A0A1U8BBR3	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110784589\|UniProtKB=A0A9R0I8W3	Spinacia oleracea	O
SPIOL\|Gene=LOC110779077\|UniProtKB=A0A9R0HYR3	Spinacia oleracea	LDO
SPIOL\|Gene=LOC110802070\|UniProtKB=A0A9R0KA18	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0222291\|UniProtKB=A0A251UR11	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr15g0676261\|UniProtKB=A0A9K3DZ93	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr15g0467261\|UniProtKB=A0A251S5Y3	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C700368340\|UniProtKB=A0A9R1UYC6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014487mg\|UniProtKB=A0A022RVE9	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_22278\|UniProtKB=A0A1U8E5A6	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400022496\|UniProtKB=M1C1W8	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc01g098100.2\|UniProtKB=A0A3Q7EMS1	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107796512\|UniProtKB=A0A1S4AE88	Nicotiana tabacum	O
TOBAC\|Gene=LOC107808294\|UniProtKB=A0A1S4BHG2	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi05g02271\|UniProtKB=A5BNR0	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi05g01845\|UniProtKB=F6HE68	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_C01884\|UniProtKB=A0A059CQ96	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A01P21760.1\|UniProtKB=A0A078GBZ8	Brassica napus	O
BRACM\|EnsemblGenome=Bra033510\|UniProtKB=M4EXH3	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00094148001\|UniProtKB=A0A078IJ19	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C01P27110.1\|UniProtKB=A0A078HZY4	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A08P11960.1\|UniProtKB=A0A078GBK0	Brassica napus	O
BRACM\|EnsemblGenome=Bra038067\|UniProtKB=M4FAF3	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_C07P47390.1\|UniProtKB=A0A078F8S2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra012765\|UniProtKB=A0A3P6A0Z1	Brassica campestris	LDO
GOSHI\|Gene=LOC107936146\|UniProtKB=A0A1U8MBT6	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_021193\|UniProtKB=A0A061EP89	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g029802mg\|UniProtKB=A0A067G876	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_010G024400v3\|UniProtKB=B9HSB9	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_008G209600v3\|UniProtKB=A0A2K1ZKX2	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_15G013200\|UniProtKB=A0A2C9UC31	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_03G194200\|UniProtKB=A0A2C9W8Y2	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0680810\|UniProtKB=B9RT37	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_05G031500\|UniProtKB=A0A0R0FAD8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g112090\|UniProtKB=I3ST48	Medicago truncatula	LDO
JUGRE\|Gene=LOC108994695\|UniProtKB=A0A2I4F1M7	Juglans regia	O
JUGRE\|EnsemblGenome=Jr07_18780\|UniProtKB=A0A2I4F3A0	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G153740\|UniProtKB=A0A0A0L578	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G009000\|UniProtKB=A0A251N4N1	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_3G093900\|UniProtKB=M5WSP1	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_78465\|UniProtKB=D8QU59	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c15_15310\|UniProtKB=A9SQF1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0063s0083\|UniProtKB=A0A2R6WRR5	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003070030\|UniProtKB=A0A1Y1I6Y8	Klebsormidium nitens	LDO