PANTHER Gene Information

Gene Symbol(s):

lsm12a

Organism:

Danio rerio

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Gene Name:

Protein LSM12 homolog A

Gene ID:

ZDB-GENE-040426-2164

Protein ID:

Q6PBA2

Persistent Id:

PTN000338871

Alternate Ids:

LS12A_DANRE(UniProtKB-ID)	BC059805(EMBL)
82186856(GI)	NP_998313(refSeq)
lsm12(Synonym)	AAH59805(EMBL-CDS)
ZDB-GENE-040426-2164(ZFIN)	lsm12a(Symbol)
406422(GeneID)
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PANTHER Classification

PANTHER Family:	LSM12 HOMOLOG (PTHR13542)
PANTHER Subfamily:	PROTEIN LSM12 (PTHR13542:SF0)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, molecular_function
GO BP Complete:	biological_process
GO CC Complete:	cellular_component

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=26407\|UniProtKB=Q3MHD2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000009261.4\|UniProtKB=A0A2I3S7Y8	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000010589.3\|UniProtKB=A0A2I2Y1P3	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000006804.4\|UniProtKB=F7GZM1	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1919592\|UniProtKB=Q9D0R8	Mus musculus	LDO
RAT\|RGD=1309441\|UniProtKB=A0A8I6GM11	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000016252\|UniProtKB=Q0VCF9	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000056031.1\|UniProtKB=A0A8W4FFA0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000009071.4\|UniProtKB=F6YE35	Equus caballus	LDO
HORSE\|Ensembl=ENSECAG00000009071.4\|UniProtKB=F6YE35	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000037021.3\|UniProtKB=A0A2I2UQ30	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845009725.1\|UniProtKB=A0A8I3NCM8	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000011809.3\|UniProtKB=F7CBC3	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000046842.1\|UniProtKB=A0A6I8NEK0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00015025735\|UniProtKB=Q5ZML5	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000037253.1\|UniProtKB=A0A803TRN5	Anolis carolinensis	LDO
XENLA\|Gene=lsm12\|UniProtKB=Q6GP89	Xenopus laevis	O
XENLA\|Gene=lsm12.L\|UniProtKB=A0A1L8ESE6	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5780031\|UniProtKB=F6X492	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011310.2\|UniProtKB=H2LNS7	Oryzias latipes	LDO
LEPOC\|Ensembl=ENSLOCG00000013079.1\|UniProtKB=W5N650	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118424084\|UniProtKB=A0A9J7LTT0	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC115918073\|UniProtKB=A0A7M7P598	Strongylocentrotus purpuratus	LDO
STRPU\|EnsemblGenome=LOC590442\|UniProtKB=A0A7M7RH98	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00010922\|UniProtKB=A0A486WUL5	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00037725\|UniProtKB=A8XSB3	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0036057\|UniProtKB=Q9VT67	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0030364\|UniProtKB=Q9VYR0	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP002167\|UniProtKB=Q7QK61	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC015064\|UniProtKB=D2A635	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_301867\|UniProtKB=E9GAV9	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW006950\|UniProtKB=B7PUR0	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG166504\|UniProtKB=T1EY68	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g236359\|UniProtKB=A7RHX7	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG63807\|UniProtKB=B3RQN9	Trichoplax adhaerens	LDO
YEAST\|SGD=S000001163\|UniProtKB=P38828	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AGR340W\|UniProtKB=Q74Z66	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000175092\|UniProtKB=Q59LZ7	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_C11055g\|UniProtKB=Q6CCA6	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_03955\|UniProtKB=C8V620	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_6G08070\|UniProtKB=Q4WN04	Neosartorya fumigata	LDO
USTMA\|EnsemblGenome=UMAG_11685\|UniProtKB=A0A0D1CAS4	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_06667\|UniProtKB=E3K893	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_85462\|UniProtKB=F4NUY9	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0270402\|UniProtKB=Q55BQ9	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_88261\|UniProtKB=F0ZNA9	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_35_5290\|UniProtKB=Q9U8C2	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb09.211.0740\|UniProtKB=Q38E83	Trypanosoma brucei	LDO
PLAF7\|EnsemblGenome=PF3D7_0611900\|UniProtKB=C6KSW3	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00004238001\|UniProtKB=A0BC77	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00035779001\|UniProtKB=A0C782	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_25278\|UniProtKB=B8CE83	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3H3B6_PHYRM\|UniProtKB=H3H3B6	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_10g421850v5\|UniProtKB=A8ICM2	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00088p00108420\|UniProtKB=W1NXY9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_16G00670\|UniProtKB=A0A0K9PT21	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma09_g13970\|UniProtKB=A0A804KJC4	Musa acuminata subsp. malaccensis	LDO
MUSAM\|EnsemblGenome=Ma03_g06000\|UniProtKB=A0A804I8Y8	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_019521mg\|UniProtKB=K3YZ15	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G242100\|UniProtKB=C5XYW7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb194690\|UniProtKB=A0A804NXY9	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb254250\|UniProtKB=B4FKI8	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0741900\|UniProtKB=Q6Z7R6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g59590v3\|UniProtKB=A0A2K2D5U1	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS6B02G338900\|UniProtKB=W5GZ13	Triticum aestivum	LDO
NELNU\|Gene=LOC104607930\|UniProtKB=A0A1U8AZ19	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110782902\|UniProtKB=A0A9R0I547	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr12g0562981\|UniProtKB=A0A251UYF2	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400159870\|UniProtKB=A0A9R1VT69	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014542mg\|UniProtKB=A0A022Q7J8	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107764607\|UniProtKB=A0A1S3XFQ0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107815829\|UniProtKB=A0A1S4C734	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi01g02091\|UniProtKB=D7TNL4	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B02549\|UniProtKB=A0A059D5D2	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00027912001\|UniProtKB=A0A078J658	Brassica napus	O
BRACM\|EnsemblGenome=Bra007903\|UniProtKB=M4CUK8	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00030088001\|UniProtKB=A0A078J772	Brassica napus	LDO
BRANA\|Gene_ORFName=GSBRNA2T00090713001\|UniProtKB=A0A078FV15	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra012415\|UniProtKB=M4D7F5	Brassica campestris	LDO
ARATH\|TAIR=locus=2020648\|UniProtKB=F4I5D2	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2199882\|UniProtKB=Q8L466	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107952762\|UniProtKB=A0A1U8NZC6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107961671\|UniProtKB=A0A1U8PPZ9	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_010235\|UniProtKB=A0A061E6V2	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g030131mg\|UniProtKB=A0A067H4U6	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_010G095600v3\|UniProtKB=A0A2K1YRI0	Populus trichocarpa	O
POPTR\|Gene_ORFName=POPTR_T169600\|UniProtKB=A0A3N7GWV4	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_008G146200v3\|UniProtKB=B9HJR8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_01G197300\|UniProtKB=A0A2C9WMS4	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0394080\|UniProtKB=B9SZI5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_18G133800\|UniProtKB=I1N1D7	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_08G290400\|UniProtKB=I1KXJ7	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g461280\|UniProtKB=A0A072U132	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_8g063230\|UniProtKB=G7LFG2	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr13_17590\|UniProtKB=A0A2I4E1M4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G603270\|UniProtKB=A0A0A0KQA9	Cucumis sativus	LDO
SELML\|EnsemblGenome=SELMODRAFT_270872\|UniProtKB=D8RI39	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_440813\|UniProtKB=D8REJ8	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c1_7410\|UniProtKB=A9RZZ6	Physcomitrella patens	LDO
PHYPA\|EnsemblGenome=Pp3c7_23840\|UniProtKB=A0A2K1KCU0	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0065s0085\|UniProtKB=A0A2R6WQZ7	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002150140\|UniProtKB=A0A1Y1IA53	Klebsormidium nitens	LDO