PANTHER Gene Information

Gene Symbol(s):

tardbp

Organism:

Danio rerio

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Gene Name:

TAR DNA-binding protein 43

Gene ID:

ZDB-GENE-030131-3777

Protein ID:

Q802C7

Persistent Id:

PTN002544388

Alternate Ids:

ZDB-GENE-030131-3777(ZFIN)	Q802C7_DANRE(UniProtKB-ID)
325052(GeneID)	ENSDART00000058555(Ensembl_TRS)
41393063(GI)	Q802C7(Synonym)
NM_201476(refSeq)	BX663614(EMBL)
ENSDARG00000040031(Ensembl)	AAH49348(EMBL-CDS)
ENSDARP00000058554(Ensembl_PRO)
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PANTHER Classification

PANTHER Family:	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN (PTHR48033)
PANTHER Subfamily:	TAR DNA-BINDING PROTEIN 43 (PTHR48033:SF9)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	regulation of gene expression
PANTHER GO-slim Cellular Component:	nucleoplasm chromatin
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	nucleic acid binding, DNA binding, RNA binding
GO BP Complete:	neuromuscular junction development, RNA splicing, locomotory behavior, axon extension, axonogenesis, skeletal muscle tissue development, regulation of RNA splicing, regulation of gene expression, blood vessel morphogenesis, mRNA processing
GO CC Complete:	nucleus, chromatin, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=11571\|UniProtKB=Q13148	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000048576.1\|UniProtKB=H2PY00	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000042352.1\|UniProtKB=A0A2I2YWU7	Gorilla gorilla gorilla	O
GORGO\|Ensembl=ENSGGOG00000015357.3\|UniProtKB=G3RH63	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000007456.4\|UniProtKB=H9EMX3	Macaca mulatta	O
MOUSE\|MGI=MGI=2387629\|UniProtKB=Q921F2	Mus musculus	O
RAT\|RGD=1310906\|UniProtKB=A0A8I6GLU8	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000003697.6\|UniProtKB=G3MX91	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000023126.4\|UniProtKB=A0A8D0UXS6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000008338.3\|UniProtKB=F6WAU6	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000000050.5\|UniProtKB=A0A2I2U8C8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845007703.1\|UniProtKB=A0A8I3N4T6	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845003100.1\|UniProtKB=A0A8I3MQ17	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000011233.4\|UniProtKB=A0A5F8GU32	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000013320.3\|UniProtKB=F7EDX1	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010021644.1\|UniProtKB=A0A8V0ZL67	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_5g9\|UniProtKB=Q5ZLN5	Gallus gallus	O
XENLA\|Gene=tardbp.S\|UniProtKB=A0A8J0TE74	Xenopus laevis	O
XENLA\|Gene=tardbp.L\|UniProtKB=A0A8J0T838	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-974453\|UniProtKB=Q28F51	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000003593.2\|UniProtKB=H2LEV4	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000005188.2\|UniProtKB=A0A3B3I3X8	Oryzias latipes	O
LEPOC\|Ensembl=ENSLOCG00000006604.1\|UniProtKB=W5MHW9	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000000050.3\|UniProtKB=Q4H2Q6	Ciona intestinalis	O
BRAFL\|Gene=LOC118430725\|UniProtKB=A0A9J7NCB5	Branchiostoma floridae	O
BRAFL\|Gene=LOC118430918\|UniProtKB=A0A9J7MB70	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC584774\|UniProtKB=A0A7M7NWT5	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC115924609\|UniProtKB=A0A7M7NZU7	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00006514\|UniProtKB=D0VWM8	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00026137\|UniProtKB=A8WSH3	Caenorhabditis briggsae	O
DROME\|FlyBase=FBgn0036496\|UniProtKB=Q9VUN2	Drosophila melanogaster	O
DROME\|FlyBase=FBgn0025790\|UniProtKB=Q8SXP8	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP003497\|UniProtKB=Q7PSL3	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC006055\|UniProtKB=D6WYQ8	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_97182\|UniProtKB=E9G0X0	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW012026\|UniProtKB=B7QFB3	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG157599\|UniProtKB=T1EMD7	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG170286\|UniProtKB=T1F2V8	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g240700\|UniProtKB=A7RU25	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_30329\|UniProtKB=A9VDN2	Monosiga brevicollis	O
CANAL\|CGD=CAL0000199454\|UniProtKB=A0A1D8PIP0	Candida albicans	O
PUCGT\|EnsemblGenome=PGTG_20403\|UniProtKB=E3NXZ8	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_07133\|UniProtKB=E3K9E2	Puccinia graminis	O
ENTH1\|EnsemblGenome=EHI_183100\|UniProtKB=C4LV83	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0279695\|UniProtKB=Q54WE9	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_30303\|UniProtKB=F0ZF84	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_23_0730\|UniProtKB=Q4QB90	Leishmania major	O
LEIMA\|EnsemblGenome=LMJF_24_1570\|UniProtKB=Q4QAH4	Leishmania major	O
TRIV3\|Gene_ORFName=TVAG_108440\|UniProtKB=A2EQG8	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_345400\|UniProtKB=A2EW18	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_0916700\|UniProtKB=Q8I2Y5	Plasmodium falciparum	O
PLAF7\|EnsemblGenome=PF3D7_0414500\|UniProtKB=Q8I1U3	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00022603001\|UniProtKB=A0E2B4	Paramecium tetraurelia	O
CHLRE\|EnsemblGenome=CHLRE_07g330300v5\|UniProtKB=A0A2K3DJU4	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00061p00188860\|UniProtKB=U5DCR3	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_108G00110\|UniProtKB=A0A0K9Q3V6	Zostera marina	O
MUSAM\|EnsemblGenome=Ma01_g00160\|UniProtKB=A0A804HNM1	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma08_g26140\|UniProtKB=A0A804KAW6	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma00_g04530\|UniProtKB=A0A804HNA8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma01_g12510\|UniProtKB=A0A804HTB1	Musa acuminata subsp. malaccensis	O
SORBI\|EnsemblGenome=SORBI_3007G221300\|UniProtKB=A0A1Z5RB72	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb432880\|UniProtKB=A0A1D6JH19	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb199330\|UniProtKB=B4FMA8	Zea mays	O
ORYSJ\|EnsemblGenome=Os08g0492100\|UniProtKB=B7EPZ7	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g39090v3\|UniProtKB=I1I860	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0691010\|UniProtKB=F2DUV8	Hordeum vulgare subsp. vulgare	O
SETIT\|EnsemblGenome=SETIT_014007mg\|UniProtKB=K3YID8	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G220800\|UniProtKB=C5XR18	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb028170\|UniProtKB=A0A1D6KD20	Zea mays	O
ORYSJ\|EnsemblGenome=Os08g0320100\|UniProtKB=Q6Z0P6	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g20700v3\|UniProtKB=I1I2U5	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0612070\|UniProtKB=A0A8I6Y5B4	Hordeum vulgare subsp. vulgare	O
HELAN\|EnsemblGenome=HanXRQr2_Chr11g0473901\|UniProtKB=A0A251T9C0	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr03g0113441\|UniProtKB=A0A251V9T3	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C700380730\|UniProtKB=A0A9R1UWH2	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C900497620\|UniProtKB=A0A9R1UCI3	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a019468mg\|UniProtKB=A0A022PXN9	Erythranthe guttata	O
SOLTU\|EnsemblGenome=PGSC0003DMG400028820\|UniProtKB=M1CT90	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG401017409\|UniProtKB=M1BGT3	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc12g035313.1\|UniProtKB=A0A3Q7J806	Solanum lycopersicum	O
SOLLC\|EnsemblGenome=Solyc12g035280.1\|UniProtKB=K4DDZ4	Solanum lycopersicum	O
TOBAC\|Gene=LOC107765935\|UniProtKB=A0A1S3XJM8	Nicotiana tabacum	O
TOBAC\|Gene=GTBP1\|UniProtKB=E2F3S8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107808160\|UniProtKB=A0A1S4BH10	Nicotiana tabacum	O
TOBAC\|Gene=GTBP2\|UniProtKB=E2F3S9	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi18g01859\|UniProtKB=F6GYT6	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi19g00722\|UniProtKB=A5APB9	Vitis vinifera	O
BRACM\|EnsemblGenome=Bra039380\|UniProtKB=M4FE59	Brassica campestris	O
ARATH\|TAIR=locus=504955752\|UniProtKB=Q9LHL2	Arabidopsis thaliana	O
THECC\|EnsemblGenome=TCM_030592\|UniProtKB=A0A061FBT9	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g018875mg\|UniProtKB=A0A067EVW0	Citrus sinensis	O
RICCO\|Gene_ORFName=RCOM_0523280\|UniProtKB=B9S9X4	Ricinus communis	O
CUCSA\|EnsemblGenome=Csa_7G278740\|UniProtKB=A0A0A0K3W8	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_6G026600\|UniProtKB=A0A251NKX9	Prunus persica	O
VITVI\|EnsemblGenome=Vitvi12g00750\|UniProtKB=D7TD96	Vitis vinifera	O
GOSHI\|Gene=LOC107950061\|UniProtKB=A0A1U8NMS6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107934006\|UniProtKB=A0A1U8M8G7	Gossypium hirsutum	O
GOSHI\|Gene=LOC107916320\|UniProtKB=A0A1U8KK01	Gossypium hirsutum	O
GOSHI\|Gene=LOC107954751\|UniProtKB=A0A1U8P3V5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107954030\|UniProtKB=A0A1U8P179	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_002445\|UniProtKB=A0A061DU90	Theobroma cacao	O
SOYBN\|EnsemblGenome=GLYMA_13G009800\|UniProtKB=I1LXP8	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g082650\|UniProtKB=G7J8U4	Medicago truncatula	O
PRUPE\|EnsemblGenome=PRUPE_3G195500\|UniProtKB=M5XCJ4	Prunus persica	O
AMBTC\|EnsemblGenome=AMTR_s00049p00200350\|UniProtKB=W1PUU2	Amborella trichopoda	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a008302mg\|UniProtKB=A0A022R542	Erythranthe guttata	O
TOBAC\|Gene=LOC107824717\|UniProtKB=A0A1S4D0S3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107799939\|UniProtKB=A0A1S4APY9	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi14g01694\|UniProtKB=F6HUU8	Vitis vinifera	O
BRANA\|Gene_ORFName=DARMORV10_C04P47330.1\|UniProtKB=A0A078HEZ2	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A04P13550.1\|UniProtKB=A0A078HXL9	Brassica napus	O
BRACM\|EnsemblGenome=Bra025568\|UniProtKB=M4E9W2	Brassica campestris	O
GOSHI\|Gene=LOC107892127\|UniProtKB=A0A1U8IA10	Gossypium hirsutum	O
GOSHI\|Gene=LOC107892251\|UniProtKB=A0A1U8IAH1	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_016971\|UniProtKB=A0A061EDK8	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g016617mg\|UniProtKB=A0A067EML5	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_001G344900v3\|UniProtKB=B9GI65	Populus trichocarpa	O
SOYBN\|EnsemblGenome=GLYMA_19G061100\|UniProtKB=I1N727	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G070900\|UniProtKB=I1MLU4	Glycine max	O
MEDTR\|EnsemblGenome=MTR_6g004810\|UniProtKB=A0A072U4W5	Medicago truncatula	O
CUCSA\|EnsemblGenome=Csa_3G839850\|UniProtKB=A0A0A0LG75	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_3G292100\|UniProtKB=M5XCB9	Prunus persica	O
AMBTC\|EnsemblGenome=AMTR_s00036p00067000\|UniProtKB=U5CQ50	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_14G01000\|UniProtKB=A0A0K9PWH1	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_339G00100\|UniProtKB=A0A0K9P828	Zostera marina	O
MUSAM\|EnsemblGenome=Ma07_g13370\|UniProtKB=A0A804JVE4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma10_g21190\|UniProtKB=A0A804KYM7	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_020253mg\|UniProtKB=K3Z135	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3004G095300\|UniProtKB=C5XYF2	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb205130\|UniProtKB=B4FHJ8	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb240020\|UniProtKB=C0P8S9	Zea mays	O
ORYSJ\|EnsemblGenome=Os02g0221500\|UniProtKB=Q6YVH3	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g08380v3\|UniProtKB=I1HYU9	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0580320\|UniProtKB=F2D3D5	Hordeum vulgare subsp. vulgare	O
SETIT\|EnsemblGenome=SETIT_006870mg\|UniProtKB=K3XY62	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3010G171100\|UniProtKB=C5Z4R7	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb383950\|UniProtKB=K7VDH6	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb277380\|UniProtKB=B7ZX91	Zea mays	O
ORYSJ\|EnsemblGenome=Os06g0566100\|UniProtKB=A0A0P0WY24	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g37692v3\|UniProtKB=I1GXW9	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0717200\|UniProtKB=A0A8I6YGZ0	Hordeum vulgare subsp. vulgare	O
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0417021\|UniProtKB=A0A251U0M4	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C600310970\|UniProtKB=A0A9R1X4J0	Lactuca sativa	O
TOBAC\|Gene=LOC107829667\|UniProtKB=A0A1S4DH69	Nicotiana tabacum	O
TOBAC\|Gene=LOC107806609\|UniProtKB=A0A1S4BBL3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107785518\|UniProtKB=A0A1S3ZD04	Nicotiana tabacum	O
TOBAC\|Gene=LOC107825670\|UniProtKB=A0A1S4D3X4	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi09g00196\|UniProtKB=D7U018	Vitis vinifera	O
ARATH\|TAIR=locus=4515103541\|UniProtKB=F4KCG5	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2007903\|UniProtKB=F4I906	Arabidopsis thaliana	O
POPTR\|EnsemblGenome=POPTR_005G105700v3\|UniProtKB=U5GH90	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G196500v3\|UniProtKB=A0A2K2C0F2	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_0655610\|UniProtKB=B9S5X3	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_13G348800\|UniProtKB=I1M5B0	Glycine max	O
CUCSA\|EnsemblGenome=Csa_7G450760\|UniProtKB=A0A0A0K9M1	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_3G048000\|UniProtKB=A0A251PVC7	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_48637\|UniProtKB=D8RC63	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c26_4470\|UniProtKB=A0A2K1IBU7	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_17570\|UniProtKB=A0A2K1KNW2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c4_17440\|UniProtKB=A0A2K1KNV9	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0002s0093\|UniProtKB=A0A2R6XU25	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_001670110\|UniProtKB=A0A1Y1HZ05	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002220020\|UniProtKB=A0A1Y1IAM8	Klebsormidium nitens	O