PANTHER Gene Information

Gene Symbol(s):

SO_3096

Organism:

Shewanella oneidensis

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Gene Name:

RNA polymerase sigma factor

Gene ID:

SO_3096

Protein ID:

Q8ECN9

Persistent Id:

PTN002014507

Alternate Ids:

NP_718659(refSeq)	Q8ECN9(Synonym)
499385502(GI)	SONE211586:G1GMP-2867-MONOMER(BioCyc)
AE014299(EMBL)	AAN56103(EMBL-CDS)
Q8ECN9_SHEON(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	RNA POLYMERASE ECF-TYPE SIGMA FACTO (PTHR43133)
PANTHER Subfamily:	RNA POLYMERASE SIGMA FACTOR (PTHR43133:SF51)
PANTHER GO-slim Molecular Function:	DNA-binding transcription factor activity
PANTHER GO-slim Biological Process:	regulation of DNA-templated transcription
PANTHER GO-slim Cellular Component:
PANTHER protein class:	Sigma factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, sigma factor activity
GO BP Complete:	regulation of DNA-templated transcription initiation, regulation of DNA-templated transcription, DNA-templated transcription initiation
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BATDJ\|Gene_ORFName=BATDEDRAFT_93309\|UniProtKB=F4PG20	Batrachochytrium dendrobatidis	O
CHLAA\|EnsemblGenome=Caur_0399\|UniProtKB=A9WDP3	Chloroflexus aurantiacus	LDO
CHLAA\|EnsemblGenome=Caur_3931\|UniProtKB=A9WDI9	Chloroflexus aurantiacus	O
CLOBH\|Gene_OrderedLocusName=CBO0836\|UniProtKB=A5I028	Clostridium botulinum	LDO
BACCR\|EnsemblGenome=BC_3589\|UniProtKB=Q81AH9	Bacillus cereus	LDO
CLOBH\|Gene_OrderedLocusName=CBO2299\|UniProtKB=A5I468	Clostridium botulinum	O
LISMO\|Gene=Q8Y9U7_LISMO\|UniProtKB=Q8Y9U7	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_23100\|UniProtKB=P35165	Bacillus subtilis	O
BACSU\|EnsemblGenome=BSU_38700\|UniProtKB=P94370	Bacillus subtilis	O
BACSU\|EnsemblGenome=BSU_27120\|UniProtKB=O05404	Bacillus subtilis	O
BACSU\|EnsemblGenome=BSU_01730\|UniProtKB=Q45585	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0647\|UniProtKB=Q81HY1	Bacillus cereus	O
BACCR\|EnsemblGenome=BC_2108\|UniProtKB=Q81E80	Bacillus cereus	O
BACCR\|EnsemblGenome=BC_5363\|UniProtKB=Q814Q9	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1598\|UniProtKB=Q9X1T4	Thermotoga maritima	LDO
GLOVI\|Gene=Q7NFE2_GLOVI\|UniProtKB=Q7NFE2	Gloeobacter violaceus	LDO
LEPIN\|EnsemblGenome=LA_4122\|UniProtKB=Q8EYU1	Leptospira interrogans	LDO
LEPIN\|EnsemblGenome=LA_4098\|UniProtKB=Q8EYW5	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LA_3652\|UniProtKB=Q8F045	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LA_1205\|UniProtKB=Q8F6U5	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_4347\|UniProtKB=Q89ZN0	Bacteroides thetaiotaomicron	O
BACTN\|EnsemblGenome=BT_4647\|UniProtKB=Q89YT4	Bacteroides thetaiotaomicron	LDO
BACTN\|EnsemblGenome=BT_2044\|UniProtKB=Q8A642	Bacteroides thetaiotaomicron	O
RHOBA\|EnsemblGenome=RB11473\|UniProtKB=Q7UEA5	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB5081\|UniProtKB=Q7UGQ4	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB10120\|UniProtKB=Q7UKJ2	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB8816\|UniProtKB=Q7UMI2	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB10049\|UniProtKB=Q7UKM8	Rhodopirellula baltica	LDO
RHOBA\|EnsemblGenome=RB6517\|UniProtKB=Q7UQ50	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB4241\|UniProtKB=Q7USX9	Rhodopirellula baltica	LDO
RHOBA\|EnsemblGenome=RB4859\|UniProtKB=Q7UH42	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB9561\|UniProtKB=Q7ULE1	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB4165\|UniProtKB=Q7UT21	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB486\|UniProtKB=Q7UYM9	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB912\|UniProtKB=Q7UY35	Rhodopirellula baltica	LDO
RHOBA\|EnsemblGenome=RB12251\|UniProtKB=Q7UIY5	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB5968\|UniProtKB=Q7UR06	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB7926\|UniProtKB=Q7UMX1	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB5420\|UniProtKB=Q7URW1	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB2840\|UniProtKB=Q7UV68	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB9728\|UniProtKB=Q7UL54	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB7098\|UniProtKB=Q7UP86	Rhodopirellula baltica	O
RHOBA\|EnsemblGenome=RB8492\|UniProtKB=Q7UFL5	Rhodopirellula baltica	O
DICTD\|EnsemblGenome=Dtur_0070\|UniProtKB=B8DYM6	Dictyoglomus turgidum	O
DICTD\|EnsemblGenome=Dtur_0843\|UniProtKB=B8E041	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN0479\|UniProtKB=Q8RG39	Fusobacterium nucleatum	LDO
BRADU\|Gene=Q89N14_BRADU\|UniProtKB=Q89N14	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89S48_BRADU\|UniProtKB=Q89S48	Bradyrhizobium diazoefficiens	LDO
VIBCH\|EnsemblGenome=VC_1045\|UniProtKB=Q9KT60	Vibrio cholerae	LDO