PANTHER Gene Information

Gene Symbol(s):

PF3D7_1307000

Organism:

Plasmodium falciparum

View Gene in Tree

Tree

Gene Name:

Exosome complex component RRP40, putative

Gene ID:

PF3D7_1307000

Protein ID:

Q8IEP5

Persistent Id:

PTN001084460

Alternate Ids:

Q8IEP5_PLAF7(UniProtKB-ID)	23615214(GI)
PF3D7_1307000(Ensembl)	XM_001349761(refSeq)
AL844509(EMBL)	CAD52204(EMBL-CDS)
813925(GeneID)	Q8IEP5(Synonym)
Show All

PANTHER Classification

PANTHER Family:	PNAS-3 RELATED (PTHR21321)
PANTHER Subfamily:	EXOSOME COMPLEX COMPONENT RRP40 (PTHR21321:SF1)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:	snRNA 3'-end processing nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay polyadenylation-dependent ncRNA catabolic process tRNA metabolic process maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PANTHER GO-slim Cellular Component:	nuclear lumen cytoplasm exosome (RNase complex) nuclear protein-containing complex
PANTHER protein class:	RNA processing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	poly(A)-dependent snoRNA 3'-end processing, U4 snRNA 3'-end processing, nuclear polyadenylation-dependent rRNA catabolic process, nuclear-transcribed mRNA catabolic process, CUT catabolic process, rRNA processing, TRAMP-dependent tRNA surveillance pathway, exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO CC Complete:	cytoplasmic exosome (RNase complex), nuclear exosome (RNase complex), exosome (RNase complex)

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

rRNA processing, Metabolism of RNA, rRNA processing in the nucleus and cytosol, Major pathway of rRNA processing in the nucleolus and cytosol

Orthologs

ID	Organism	Type
HUMAN\|HGNC=17944\|UniProtKB=Q9NQT5	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000020952.6\|UniProtKB=G2HIV3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000006970.3\|UniProtKB=A0A2I2YV06	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000008665.4\|UniProtKB=A0A1D5Q1B3	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1913612\|UniProtKB=Q7TQK4	Mus musculus	LDO
RAT\|RGD=1304739\|UniProtKB=D3ZT51	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000018925\|UniProtKB=Q3T0E1	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000005355.5\|UniProtKB=F1ST67	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000005469.4\|UniProtKB=A0A3Q2H9D7	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000011923.5\|UniProtKB=A0A2I2UCY0	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845013936.1\|UniProtKB=A0A8I3NNW5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000002978.4\|UniProtKB=F6Q542	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000000886.3\|UniProtKB=A0A6I8N2Z6	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010010972.1\|UniProtKB=A0A8V0Y2R0	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000039595.1\|UniProtKB=A0A803SXH0	Anolis carolinensis	LDO
XENLA\|Gene=exosc3.L\|UniProtKB=Q58E93	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-966926\|UniProtKB=A0A7D9NK02	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000029052.1\|UniProtKB=A0A3B3HMS9	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-050706-140\|UniProtKB=Q4KMD2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000011471.1\|UniProtKB=W5N0D5	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000004719.3\|UniProtKB=H2XU65	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118432466\|UniProtKB=A0A9J7MEX6	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC575819\|UniProtKB=A0A7M7GHP7	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00010325\|UniProtKB=Q93830	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00025310\|UniProtKB=A8WS86	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00278534\|UniProtKB=A0A2A6C4Z9	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0260648\|UniProtKB=Q8IPX7	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP010247\|UniProtKB=Q7PJS3	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC005405\|UniProtKB=D6WZ05	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_319933\|UniProtKB=E9GNA7	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_304185\|UniProtKB=E9GJU9	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG158356\|UniProtKB=T1EMP4	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG90168\|UniProtKB=T1G7L8	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g120763\|UniProtKB=A7SJP6	Nematostella vectensis	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_38871\|UniProtKB=A9VAP4	Monosiga brevicollis	LDO
YEAST\|SGD=S000005502\|UniProtKB=Q08285	Saccharomyces cerevisiae	LDO
CANAL\|CGD=CAL0000191551\|UniProtKB=A0A1D8PCE7	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E33121g\|UniProtKB=Q6C3P8	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04617\|UniProtKB=Q5B4B3	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G02340\|UniProtKB=Q4WIC4	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU00693\|UniProtKB=Q7SHW1	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_09279\|UniProtKB=A7EVC1	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_00354\|UniProtKB=Q0V6L0	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC22A12.12c\|UniProtKB=O13903	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_04321\|UniProtKB=B6K6I8	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND02660\|UniProtKB=Q5KIK2	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_10771\|UniProtKB=A0A0D1E321	Ustilago maydis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_29097\|UniProtKB=F4NRX9	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_004770\|UniProtKB=C4M073	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0276783\|UniProtKB=Q7KWX9	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_160096\|UniProtKB=F1A5Q1	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_04_0120\|UniProtKB=Q9N857	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb09.160.5160\|UniProtKB=Q38EN5	Trypanosoma brucei	LDO
GIAIC\|Gene_ORFName=GL50803_0017091\|UniProtKB=A0A644F3S1	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_380110\|UniProtKB=A2DXE9	Trichomonas vaginalis	LDO
PARTE\|EnsemblGenome=GSPATT00000083001\|UniProtKB=Q6BFH1	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00003438001\|UniProtKB=A0E5L0	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_4340\|UniProtKB=B8BZ03	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3HBE3_PHYRM\|UniProtKB=H3HBE3	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_07g319900v5\|UniProtKB=A8I6W9	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00009p00262150\|UniProtKB=W1NI63	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_20G00540\|UniProtKB=A0A0K9PKT3	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g07490\|UniProtKB=A0A804HRC5	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_002741mg\|UniProtKB=K3XLG8	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3003G246000\|UniProtKB=C5XFW6	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb157740\|UniProtKB=A0A804NFS4	Zea mays	LDO
MAIZE\|EnsemblGenome=Zm00001eb359590\|UniProtKB=A0A804QU03	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb157720\|UniProtKB=B6T7D6	Zea mays	O
ORYSJ\|EnsemblGenome=Os01g0891400\|UniProtKB=Q5JLX2	Oryza sativa	LDO
ORYSJ\|EnsemblGenome=Os01g0661400\|UniProtKB=Q0JKN6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_2g45690v3\|UniProtKB=A0A0Q3KDH1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0277390\|UniProtKB=A0A8I6X6R2	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS3A02G239900\|UniProtKB=A0A3B6EIV6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G268300\|UniProtKB=W5CY61	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G240300\|UniProtKB=A0A3B6GUC5	Triticum aestivum	LDO
NELNU\|Gene=LOC104593200\|UniProtKB=A0A1U7ZCG9	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110789450\|UniProtKB=A0A9R0JWM4	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0770031\|UniProtKB=A0A251S2L5	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr16g0770041\|UniProtKB=A0A9K3DUW7	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0730801\|UniProtKB=A0A251RX66	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400187250\|UniProtKB=A0A9R1VWK8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a012779mg\|UniProtKB=A0A022RRE6	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_17767\|UniProtKB=A0A1U8H4A9	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400042364\|UniProtKB=M1DQJ6	Solanum tuberosum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400027091\|UniProtKB=M1CKX6	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107811937\|UniProtKB=A0A1S4BU59	Nicotiana tabacum	O
TOBAC\|Gene=LOC107766912\|UniProtKB=A0A1S3XN90	Nicotiana tabacum	O
TOBAC\|Gene=LOC107793144\|UniProtKB=A0A1S4A2S5	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi17g00823\|UniProtKB=D7SHR2	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B00371\|UniProtKB=A0A059CYC3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A08P18330.1\|UniProtKB=A0A078JAV3	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra040068\|UniProtKB=A0A397YAV9	Brassica campestris	LDO
ARATH\|TAIR=locus=505006271\|UniProtKB=Q94AW9	Arabidopsis thaliana	O
ARATH\|TAIR=locus=504955555\|UniProtKB=Q500X1	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107933413\|UniProtKB=A0A1U8M2T0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107887158\|UniProtKB=A0A1U8HL74	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_012055\|UniProtKB=A0A061G112	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g026458mg\|UniProtKB=A0A067G1Y6	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_012G080300v3\|UniProtKB=A9PA72	Populus trichocarpa	LDO
RICCO\|Gene_ORFName=RCOM_1510750\|UniProtKB=B9RB31	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_01G053700\|UniProtKB=K7K1Z2	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_02G112000\|UniProtKB=I1JE93	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g009430\|UniProtKB=G7KAL8	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_5g043110\|UniProtKB=B7FLI0	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr02_03460\|UniProtKB=A0A2I4EPG7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G004950\|UniProtKB=A0A0A0LP58	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G174300\|UniProtKB=A0A251PDB0	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_141745\|UniProtKB=D8QYF0	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_102189\|UniProtKB=D8RU21	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c9_4960\|UniProtKB=A0A2K1K236	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0033s0011\|UniProtKB=A0A2R6X661	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000830300\|UniProtKB=A0A1Y1I0B7	Klebsormidium nitens	LDO
NITMS\|EnsemblGenome=Nmar_0431\|UniProtKB=A9A5C8	Nitrosopumilus maritimus	O
KORCO\|EnsemblGenome=Kcr_1371\|UniProtKB=B1L6N8	Korarchaeum cryptofilum	O
SACS2\|EnsemblGenome=SSO0736\|UniProtKB=Q9UXC4	Sulfolobus solfataricus	O
PYRAE\|EnsemblGenome=PAE2208\|UniProtKB=Q8ZVM8	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_1777\|UniProtKB=Q8TPX7	Methanosarcina acetivorans	O
THEKO\|EnsemblGenome=TK1635\|UniProtKB=Q5JIR5	Thermococcus kodakaraensis	O