PANTHER Gene Information

Gene Symbol(s):

At2g28450

Organism:

Arabidopsis thaliana

View Gene in Tree


Tree	Reduced Tree

Gene Name:

Zinc finger CCCH domain-containing protein 24

Gene ID:

2056553

Protein ID:

Q8L7S3

Persistent Id:

PTN000115080

Alternate Ids:

Q9SKM5(AltAccession)	AAN72304(EMBL-CDS)
AC006283(EMBL)	75154217(GI)
locus:2056553(TAIR)	C3H24(Synonym)
AT2G28450(Ensembl)	817393(GeneID)
C3H24_ARATH(UniProtKB-ID)	2.1.1.-(EC)
Show All

PANTHER Classification

PANTHER Family:	TRNA (URACIL-5-)-METHYLTRANSFERASE (PTHR45904)
PANTHER Subfamily:	TRNA (URACIL-5-)-METHYLTRANSFERASE HOMOLOG A (PTHR45904:SF2)
PANTHER GO-slim Molecular Function:	RNA binding
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	RNA methyltransferase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA methyltransferase activity, transcription cis-regulatory region binding
GO BP Complete:	RNA processing
GO CC Complete:	nucleus

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=25748\|UniProtKB=Q96GJ1	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000047165.1\|UniProtKB=A0A2I3RDK0	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000023413.5\|UniProtKB=H2R4N1	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000023759.2\|UniProtKB=G3SG06	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000010394.4\|UniProtKB=F6UTK6	Macaca mulatta	O
MOUSE\|MGI=MGI=2442530\|UniProtKB=Q8BQJ6	Mus musculus	O
PIG\|Ensembl=ENSSSCG00000012489.6\|UniProtKB=F1S1L6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000021573.4\|UniProtKB=F6Y776	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000038216.3\|UniProtKB=A0A2I2UAY9	Felis catus	O
MONDO\|Ensembl=ENSMODG00000041502.1\|UniProtKB=A0A5F8GWL4	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000025630.3\|UniProtKB=F6XWG5	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000025155.2\|UniProtKB=F7GHX6	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000004211.3\|UniProtKB=F6S5T3	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010014739.1\|UniProtKB=A0A8V0YWE0	Gallus gallus	O
XENTR\|Xenbase=XB-GENE-992779\|UniProtKB=A0A6I8Q899	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000006824.2\|UniProtKB=H2LR73	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-050809-101\|UniProtKB=A4QP75	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000005332.1\|UniProtKB=W5MDG6	lepisosteus oculatus	O
BRAFL\|Gene=LOC118423966\|UniProtKB=A0A9J7LU33	Branchiostoma floridae	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_302582\|UniProtKB=E9GEK5	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW013050\|UniProtKB=B7QBC5	Ixodes scapularis	O
HUMAN\|HGNC=24974\|UniProtKB=Q8IZ69	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000014074.6\|UniProtKB=H2QL94	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000000783.3\|UniProtKB=G3QES2	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000020099.4\|UniProtKB=H9FSY6	Macaca mulatta	LDO
MOUSE\|MGI=MGI=96270\|UniProtKB=Q8BNV1	Mus musculus	LDO
RAT\|RGD=1310418\|UniProtKB=A0A8I6AAN1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000019871.6\|UniProtKB=A0A3Q1M2X8	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000010136.5\|UniProtKB=F1RHM9	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000012384.4\|UniProtKB=A0A9L0RU50	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000004170.5\|UniProtKB=M3W1P7	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845027597.1\|UniProtKB=A0A8I3Q3B5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000010321.4\|UniProtKB=F6S9Y2	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000041446.1\|UniProtKB=A0A6I8N6P4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010020816.1\|UniProtKB=A0A8V0ZM48	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000007994.4\|UniProtKB=A0A803T0F6	Anolis carolinensis	LDO
XENLA\|Gene=trmt2a.L\|UniProtKB=A0A8J0V8V8	Xenopus laevis	O
XENLA\|Gene=trmt2a.S\|UniProtKB=A0A1L8HQG2	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-980821\|UniProtKB=A0A8J0QC54	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000015143.2\|UniProtKB=H2MJX3	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-6876\|UniProtKB=Q7ZVY1	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002517.1\|UniProtKB=W5M3K3	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000021886.1\|UniProtKB=F6UUI8	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118425982\|UniProtKB=A0A9J7N2X5	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC115926715\|UniProtKB=A0A7M7T1V2	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00019241\|UniProtKB=Q9N5L0	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00037405\|UniProtKB=A8XS16	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0036838\|UniProtKB=Q9VVV7	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP012408\|UniProtKB=A0A1S4H945	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC005909\|UniProtKB=D6WVM0	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_208793\|UniProtKB=E9G437	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW018423\|UniProtKB=B7PPI6	Ixodes scapularis	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g199029\|UniProtKB=A7RLV9	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG59271\|UniProtKB=B3S5B9	Trichoplax adhaerens	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_34298\|UniProtKB=F4NUR0	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0293244\|UniProtKB=Q54C42	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_94161\|UniProtKB=F0ZG81	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_20_1710\|UniProtKB=Q4QCN1	Leishmania major	LDO
TRYB2\|Gene_ORFName=TB927.1.3050\|UniProtKB=Q4GYR8	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_93103\|UniProtKB=A8B660	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_137180\|UniProtKB=A2FNS0	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_478370\|UniProtKB=A2DZV3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_151750\|UniProtKB=A2ELU0	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1133800\|UniProtKB=Q8II27	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00001345001\|UniProtKB=A0CWH5	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_269917\|UniProtKB=B8CE90	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GEE9_PHYRM\|UniProtKB=H3GEE9	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_02g101950v5\|UniProtKB=A0A2K3E2C0	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00175p00051190\|UniProtKB=U5D6H4	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_24G00830\|UniProtKB=A0A0K9PII9	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma05_g20840\|UniProtKB=A0A804J6R3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_009361mg\|UniProtKB=K3Y573	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G002800\|UniProtKB=C5YB95	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb418880\|UniProtKB=A0A1D6J2T4	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb089580\|UniProtKB=A0A060D587	Zea mays	LDO
BRADI\|EnsemblGenome=BRADI_5g02300v3\|UniProtKB=A0A0Q3E1R5	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0100410\|UniProtKB=A0A287GYZ2	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2A02G039200\|UniProtKB=A0A3B6AQ68	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G051800\|UniProtKB=A0A3B6BY37	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS2D02G037700\|UniProtKB=A0A1D5UX09	Triticum aestivum	LDO
NELNU\|Gene=LOC104594841\|UniProtKB=A0A1U7ZYC3	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110792680\|UniProtKB=A0A9R0IQJ7	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0589011\|UniProtKB=A0A251SRU7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C600316250\|UniProtKB=A0A9R1V549	Lactuca sativa	LDO
CAPAN\|EnsemblGenome=T459_28782\|UniProtKB=A0A2G2YHU2	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc11g069340.2\|UniProtKB=A0A3Q7J096	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107778852\|UniProtKB=A0A1S3YR19	Nicotiana tabacum	O
TOBAC\|Gene=LOC107783511\|UniProtKB=A0A1S3Z677	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g00290\|UniProtKB=F6GU02	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J00934\|UniProtKB=A0A059ABC8	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00028512001\|UniProtKB=A0A078J9E5	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00028511001\|UniProtKB=A0A078J8Y8	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00089987001\|UniProtKB=A0A078FTS4	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra011947\|UniProtKB=M4D639	Brassica campestris	LDO
GOSHI\|Gene=LOC107963867\|UniProtKB=A0A1U8PZT3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107943085\|UniProtKB=A0A1U8MZT2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_042040\|UniProtKB=A0A061H083	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0029901mg\|UniProtKB=A0A067GD28	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_009G013000v3\|UniProtKB=A0A2K1Z118	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_04G021900\|UniProtKB=A0A2C9VYS5	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0154700\|UniProtKB=B9SWC0	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_12G068100\|UniProtKB=K7LTE4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_11G147200\|UniProtKB=K7LQG4	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g059550\|UniProtKB=G7JPD7	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr05_09870\|UniProtKB=A0A2I4DW00	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G140820\|UniProtKB=A0A0A0KDA7	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G100600\|UniProtKB=M5W1P7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_448841\|UniProtKB=D8TAK6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_440228\|UniProtKB=D8R9C1	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_448840\|UniProtKB=D8TAK4	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c10_16370\|UniProtKB=A0A2K1JZ92	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0078s0012\|UniProtKB=A0A2R6WL48	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_004920010\|UniProtKB=A0A1Y1IJ46	Klebsormidium nitens	LDO