PANTHER Gene Information

Gene Symbol(s):

At3g15080

Organism:

Arabidopsis thaliana

View Gene in Tree


Tree	Reduced Tree

Gene Name:

RNA exonuclease 4

Gene ID:

2086320

Protein ID:

Q8LAA0

Persistent Id:

PTN000301219

Alternate Ids:

CP002686(EMBL)	195971099(GI)
BAF00773(EMBL-CDS)	AT3G15080(Ensembl)
NP_566499(refSeq)	Q8LAA0_ARATH(UniProtKB-ID)
locus:2086320(TAIR)	820738(GeneID)
Q8LAA0(Synonym)
Show All

PANTHER Classification

PANTHER Family:	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED (PTHR12801)
PANTHER Subfamily:	RNA EXONUCLEASE 4 (PTHR12801:SF45)
PANTHER GO-slim Molecular Function:	exonuclease activity
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	exoribonuclease

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	nucleic acid binding, 3'-5' exonuclease activity, exonuclease activity
GO BP Complete:	RNA processing, rRNA processing
GO CC Complete:	nucleus, cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=25722\|UniProtKB=Q8WTP8	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000007422.5\|UniProtKB=K7DR61	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000010180.3\|UniProtKB=G3RUC6	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000022516.4\|UniProtKB=F7FPB0	Macaca mulatta	O
MOUSE\|MGI=MGI=1915298\|UniProtKB=Q9CZI9	Mus musculus	O
RAT\|RGD=1305051\|UniProtKB=B2GUW6	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000017632.6\|UniProtKB=F1MZX4	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000005102.5\|UniProtKB=A0A4X1WCN6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000037942.3\|UniProtKB=A0A3Q2I3Y8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000023571.4\|UniProtKB=M3WXX5	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845003646.1\|UniProtKB=A0A8I3MIQ3	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000049468.1\|UniProtKB=A0A5F8GLJ1	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000039687.1\|UniProtKB=A0A6I8P0V3	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010015900.1\|UniProtKB=A0A8V0YMC8	Gallus gallus	O
XENLA\|Gene=aen.L\|UniProtKB=A0A1L8H0Y1	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-949418\|UniProtKB=F6QSP9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000029585.1\|UniProtKB=A0A3B3HN37	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-100422-17\|UniProtKB=E7F5Q4	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000014240.1\|UniProtKB=W5NA74	lepisosteus oculatus	O
HUMAN\|HGNC=6130\|UniProtKB=Q96AZ6	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000044668.1\|UniProtKB=K7CFV6	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000010365.3\|UniProtKB=G3R4B5	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000007669.4\|UniProtKB=F7D5S9	Macaca mulatta	O
MOUSE\|MGI=MGI=1928895\|UniProtKB=Q9JL16	Mus musculus	O
RAT\|RGD=1306407\|UniProtKB=Q5RJP5	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000014762.6\|UniProtKB=E1BNM5	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000024867.4\|UniProtKB=I3LB04	Sus scrofa	O
PIG\|Gene=Isg20\|UniProtKB=Q66UW5	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000019499.4\|UniProtKB=A0A5F5PQ31	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000005151.6\|UniProtKB=M3W3K0	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845003672.1\|UniProtKB=A0A8I3MMJ4	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000019583.4\|UniProtKB=F6QM90	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000006380.3\|UniProtKB=F6PGC4	Ornithorhynchus anatinus	O
HUMAN\|HGNC=25745\|UniProtKB=Q9H9L3	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000001471.5\|UniProtKB=H2Q0A3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000016482.3\|UniProtKB=G3RK22	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000000037.4\|UniProtKB=F7HRE8	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2140076\|UniProtKB=Q3U1G5	Mus musculus	LDO
RAT\|RGD=15008040\|UniProtKB=A0A8I6G4U4	Rattus norvegicus	O
RAT\|RGD=41207608\|UniProtKB=A0A8I6ALQ1	Rattus norvegicus	O
RAT\|RGD=1359413\|UniProtKB=Q6AXU3	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001518\|UniProtKB=Q2YDK1	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000006471.5\|UniProtKB=F1RHI9	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000015891.4\|UniProtKB=F6VXM3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000006559.5\|UniProtKB=M3W646	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845015858.1\|UniProtKB=A0A8I3NYV1	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845008331.1\|UniProtKB=A0A8I3RW01	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000016797.3\|UniProtKB=F7FVU8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000036718.1\|UniProtKB=A0A6I8P1Q4	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010027323.1\|UniProtKB=A0A3Q2UDN4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000015444.4\|UniProtKB=H9GMB6	Anolis carolinensis	LDO
XENLA\|Gene=isg20l2.L\|UniProtKB=A0A1L8FCA5	Xenopus laevis	O
XENLA\|Gene=isg20l2.S\|UniProtKB=A0A1L8F4J3	Xenopus laevis	LDO
XENTR\|Ensembl=ENSXETG00000035319\|UniProtKB=A0A6I8SBT4	Xenopus tropicalis	LDO
DANRE\|ZFIN=ZDB-GENE-070928-8\|UniProtKB=A3KH10	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000008083.1\|UniProtKB=W5MN59	lepisosteus oculatus	LDO
BRAFL\|Gene=LOC118411375\|UniProtKB=A0A9J7KSS7	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC580696\|UniProtKB=A0A7M7RE62	Strongylocentrotus purpuratus	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g56219\|UniProtKB=A7SJI5	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG5070\|UniProtKB=B3RTI8	Trichoplax adhaerens	LDO
PANTR\|Ensembl=ENSPTRG00000051792.1\|UniProtKB=A0A2I3SE66	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000028432.2\|UniProtKB=G3SG85	Gorilla gorilla gorilla	O
HUMAN\|HGNC=12820\|UniProtKB=Q9GZR2	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000023363.4\|UniProtKB=K6Z9Z0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000014508.3\|UniProtKB=G3RF01	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000000935.4\|UniProtKB=F6R6E7	Macaca mulatta	O
MOUSE\|MGI=MGI=2684957\|UniProtKB=Q6PAQ4	Mus musculus	O
RAT\|RGD=1306220\|UniProtKB=F7ESM1	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000019721.6\|UniProtKB=F1N5B5	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000023173.4\|UniProtKB=I3L751	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000007896.4\|UniProtKB=F7E4I3	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000011652.6\|UniProtKB=M3WFH3	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845010293.1\|UniProtKB=A0A8I3NDC3	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000012817.4\|UniProtKB=F7DY31	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000002453.4\|UniProtKB=A0A6I8P3K7	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010028867.1\|UniProtKB=A0A8V1AHV0	Gallus gallus	O
XENLA\|Gene=rexo4.L\|UniProtKB=Q2TAR2	Xenopus laevis	O
XENLA\|Gene=rexo4.S\|UniProtKB=A0A1L8F115	Xenopus laevis	O
XENLA\|Gene=rexo4\|UniProtKB=Q91560	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-6258946\|UniProtKB=Q6DEW6	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000006904.2\|UniProtKB=A0A3B3IN50	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-050411-124\|UniProtKB=F1QJP9	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000003577.1\|UniProtKB=W5M787	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000010751.3\|UniProtKB=F6ZDT1	Ciona intestinalis	O
BRAFL\|Gene=LOC118415712\|UniProtKB=A0A9J7L5C7	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC594475\|UniProtKB=A0A7M7NTE7	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC590185\|UniProtKB=A0A7M7REA8	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00012465\|UniProtKB=Q9XXI3	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00039905\|UniProtKB=A8XZ67	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00114897\|UniProtKB=A0A2A6CIP0	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0036405\|UniProtKB=Q9VUC3	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP005050\|UniProtKB=Q7PQ12	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP012826\|UniProtKB=Q5TYH8	Anopheles gambiae	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_300961\|UniProtKB=E9HFX2	Daphnia pulex	O
HELRO\|EnsemblGenome=HelroG188219\|UniProtKB=T1FPS4	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g43493\|UniProtKB=A7REN8	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG19790\|UniProtKB=B3RLG6	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_37665\|UniProtKB=A9V359	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_14000\|UniProtKB=A9UPK9	Monosiga brevicollis	LDO
YEAST\|SGD=S000005440\|UniProtKB=Q08237	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER024W\|UniProtKB=Q757I9	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000191259\|UniProtKB=Q5A3Q0	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_B10824g\|UniProtKB=W0TYN9	Yarrowia lipolytica	O
YARLI\|EnsemblGenome=YALI0_B18128g\|UniProtKB=Q6CE69	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04357\|UniProtKB=Q5B523	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_7G00870\|UniProtKB=Q4WAD1	Neosartorya fumigata	O
EMENI\|EnsemblGenome=ANIA_10955\|UniProtKB=C8VBH1	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G05560\|UniProtKB=Q4WHF8	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU05036\|UniProtKB=Q7RX52	Neurospora crassa	O
NEUCR\|EnsemblGenome=NCU05217\|UniProtKB=Q7S9B7	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_13858\|UniProtKB=A7F8C7	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_16500\|UniProtKB=Q0TVG4	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC1604.09c\|UniProtKB=O94375	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00841\|UniProtKB=B6JWR3	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNG01700\|UniProtKB=Q5KE53	Cryptococcus neoformans	O
CRYNJ\|Gene_OrderedLocusName=CNC05710\|UniProtKB=P0CQ44	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_01397\|UniProtKB=Q4PER6	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_00468\|UniProtKB=E3JQR2	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_17413\|UniProtKB=E3L6D3	Puccinia graminis	LDO
PUCGT\|EnsemblGenome=PGTG_17835\|UniProtKB=E3L629	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_13674\|UniProtKB=F4P9T0	Batrachochytrium dendrobatidis	LDO
GIAIC\|Gene_ORFName=GL50803_0014763\|UniProtKB=A0A644F4H8	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_329640\|UniProtKB=A2EBD2	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_076350\|UniProtKB=A2D9N2	Trichomonas vaginalis	LDO
TRIV3\|Gene_ORFName=TVAG_258490\|UniProtKB=A2E953	Trichomonas vaginalis	O
PARTE\|EnsemblGenome=GSPATT00005519001\|UniProtKB=A0BUQ6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024196001\|UniProtKB=A0E851	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00037333001\|UniProtKB=A0CCN1	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00037005001\|UniProtKB=A0CBQ5	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_24849\|UniProtKB=B8CCE8	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_25795\|UniProtKB=B8CG05	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_2909\|UniProtKB=B8BVP5	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPS_7123\|UniProtKB=B5YNE8	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_17654\|UniProtKB=B8CFL8	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3H7F2_PHYRM\|UniProtKB=H3H7F2	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_11g480060v5\|UniProtKB=A0A2K3D8M9	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00021p00196170\|UniProtKB=W1Q0G3	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00021p00194710\|UniProtKB=W1PVG0	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_425G00170\|UniProtKB=A0A0K9P2E6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma02_g10940\|UniProtKB=A0A804I1G4	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_014175mg\|UniProtKB=K3YIV6	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3007G115801\|UniProtKB=A0A1Z5R9W3	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb042610\|UniProtKB=A0A1D6KQ53	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os08g0377400\|UniProtKB=Q7F186	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g35110v3\|UniProtKB=I1I6S4	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0702530\|UniProtKB=A0A8I6YPL4	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7A02G309800\|UniProtKB=A0A3B6RK99	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G209800\|UniProtKB=A0A3B6SKD8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7D02G306500\|UniProtKB=A0A3B6TST7	Triticum aestivum	LDO
NELNU\|Gene=LOC104599507\|UniProtKB=A0A1U8A0G9	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110799497\|UniProtKB=A0A9R0K6K8	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0449961\|UniProtKB=A0A251TKW7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500274910\|UniProtKB=A0A9R1XCW6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a012083mg\|UniProtKB=A0A022RYB2	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_23702\|UniProtKB=A0A1U8F956	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400015373\|UniProtKB=M1B8R7	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc12g014060.2\|UniProtKB=A0A3Q7J4Z6	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107799784\|UniProtKB=A0A1S4APG4	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107814025\|UniProtKB=A0A1S4C102	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi19g00156\|UniProtKB=E0CSD5	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_F03289\|UniProtKB=A0A059BUT1	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra027281\|UniProtKB=M4EER9	Brassica campestris	LDO
GOSHI\|Gene=LOC107918409\|UniProtKB=A0A1U8KM08	Gossypium hirsutum	O
GOSHI\|Gene=LOC107895248\|UniProtKB=A0A1U8ICT8	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_031662\|UniProtKB=A0A061F8E5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g023843mg\|UniProtKB=A0A067F5L9	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_001G373500v3\|UniProtKB=B9GGE5	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_03G104200\|UniProtKB=A0A2C9W6G0	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1742960\|UniProtKB=B9RXA0	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_12G227500\|UniProtKB=I1LV41	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_13G272800\|UniProtKB=A0A0R0H1D5	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_2g078510\|UniProtKB=A0A072VB36	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr09_13800\|UniProtKB=A0A2I4ETK4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G628920\|UniProtKB=A0A0A0KZK3	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_4G172700\|UniProtKB=M5X1Y7	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_79010\|UniProtKB=D8QUC6	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_165487\|UniProtKB=D8QUV1	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c9_5320\|UniProtKB=A0A2K1K242	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0007s0212\|UniProtKB=A0A2R6XP24	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001620210\|UniProtKB=A0A1Y1I3P7	Klebsormidium nitens	LDO