PANTHER Gene Information

Gene Symbol(s):

PPR40

Organism:

Arabidopsis thaliana

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Gene Name:

Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial

Gene ID:

2086032

Protein ID:

Q9LSQ2

Persistent Id:

PTN000612858

Alternate Ids:

BAA94973(EMBL-CDS)	AB026636(EMBL)
15228903(GI)	AT3G16890(Ensembl)
PP239_ARATH(UniProtKB-ID)	NP_188314(refSeq)
820944(GeneID)	PP239(Synonym)
locus:2086032(TAIR)	AT3G16890(Ensembl_PRO)
PPR40(Symbol)	AT3G16890(Ensembl_TRS)
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PANTHER Classification

PANTHER Family:	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED (PTHR47942)
PANTHER Subfamily:	OS12G0557800 PROTEIN (PTHR47942:SF15)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	mRNA binding
GO BP Complete:	response to oxidative stress, response to abscisic acid, response to salt stress, mRNA processing, mitochondrial ATP synthesis coupled electron transport
GO CC Complete:	cytoplasm, mitochondrion

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
YEAST\|SGD=S000005926\|UniProtKB=Q12089	Saccharomyces cerevisiae	O
ASPFU\|EnsemblGenome=AFUA_2G10790\|UniProtKB=Q4X191	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07871\|UniProtKB=Q7SBT8	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_08777\|UniProtKB=A7ETX0	Sclerotinia sclerotiorum	O
BATDJ\|Gene_ORFName=BATDEDRAFT_86293\|UniProtKB=F4NWH8	Batrachochytrium dendrobatidis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_87151\|UniProtKB=F4NYP3	Batrachochytrium dendrobatidis	O
EREGS\|EnsemblGenome=AGOS_AFR480C\|UniProtKB=Q752U3	Eremothecium gossypii	O
YARLI\|EnsemblGenome=YALI0_F27753g\|UniProtKB=Q6C051	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_05927\|UniProtKB=Q5B0K3	Emericella nidulans	O
NEUCR\|EnsemblGenome=NCU02674\|UniProtKB=Q7SH55	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_11613\|UniProtKB=A7F1Z2	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_04344\|UniProtKB=Q0UV70	Phaeosphaeria nodorum	O
CRYNJ\|EnsemblGenome=CNB05560\|UniProtKB=Q5KLE5	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_12186\|UniProtKB=E3KPJ5	Puccinia graminis	O
LEIMA\|EnsemblGenome=LMJF_32_1210\|UniProtKB=Q4Q5G1	Leishmania major	O
TRYB2\|Gene_ORFName=Tb11.01.6040\|UniProtKB=Q381Z3	Trypanosoma brucei	O
TRYB2\|Gene_ORFName=Tb10.6k15.0120\|UniProtKB=Q389W1	Trypanosoma brucei	O
PARTE\|EnsemblGenome=GSPATT00012925001\|UniProtKB=A0D323	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_bd1788\|UniProtKB=B8LE47	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_23650\|UniProtKB=B8C6A4	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_23887\|UniProtKB=B8C7L1	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_21886\|UniProtKB=B8BYK0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24893\|UniProtKB=B8CCM8	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24505\|UniProtKB=B8CAF4	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24332\|UniProtKB=B8LBX6	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GW70_PHYRM\|UniProtKB=H3GW70	Phytophthora ramorum	O
PHYRM\|Gene=H3GRA3_PHYRM\|UniProtKB=H3GRA3	Phytophthora ramorum	O
PHYRM\|Gene=H3H407_PHYRM\|UniProtKB=H3H407	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g554528v5\|UniProtKB=A0A2K3D746	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_01g050500v5\|UniProtKB=A0A2K3E800	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_16g649800v5\|UniProtKB=A0A2K3CSU9	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00077p00196020\|UniProtKB=W1P3A5	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00066p00184190\|UniProtKB=U5DDL0	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_322G00050\|UniProtKB=A0A0K9P8T8	Zostera marina	LDO
ZOSMR\|Gene_ORFName=ZOSMA_767G00040\|UniProtKB=A0A0K9NPM5	Zostera marina	O
MUSAM\|EnsemblGenome=Ma02_g03690\|UniProtKB=A0A804HYW8	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_019461mg\|UniProtKB=K3YYV5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3008G127550\|UniProtKB=A0A1Z5R6B0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb007190\|UniProtKB=C0HEC5	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os12g0557800\|UniProtKB=Q0IMN9	Oryza sativa	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0443620\|UniProtKB=M0VVS2	Hordeum vulgare subsp. vulgare	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002242mg\|UniProtKB=A0A022RVL9	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107801826\|UniProtKB=A0A1S4AVK3	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi05g00087\|UniProtKB=F6H743	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra021210\|UniProtKB=M4DXG4	Brassica campestris	LDO
GOSHI\|Gene=LOC107892103\|UniProtKB=A0A1U8I2W7	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_021322\|UniProtKB=A0A061EQQ8	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0476592mg\|UniProtKB=A0A067EBR4	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g048258mg\|UniProtKB=A0A067FWR7	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_008G108300v3\|UniProtKB=A0A2K1ZF97	Populus trichocarpa	LDO
RICCO\|Gene_ORFName=RCOM_0999800\|UniProtKB=B9RZM2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G268300\|UniProtKB=A0A0R0IT60	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g070060\|UniProtKB=A0A072TRU4	Medicago truncatula	LDO
MEDTR\|EnsemblGenome=MTR_8g070050\|UniProtKB=A0A072TS48	Medicago truncatula	O
CUCSA\|EnsemblGenome=Csa_3G165700\|UniProtKB=A0A0A0L5W1	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G002300\|UniProtKB=A0A251QTM3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_169661\|UniProtKB=D8RAK7	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c2_27580\|UniProtKB=A0A2K1L376	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0003s0152\|UniProtKB=A0A2R6XT21	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000050390\|UniProtKB=A0A1Y1HJZ4	Klebsormidium nitens	O