PANTHER Gene Information

Gene Symbol(s):

SF1

Organism:

Arabidopsis thaliana

View Gene in Tree


Tree	Reduced Tree

Gene Name:

Splicing factor-like protein 1

Gene ID:

2176222

Protein ID:

Q9LU44

Persistent Id:

PTN000129804

Alternate Ids:

AtSF1 {ECO:0000303\|PubMed:24580679}(Synonym)	332008681(GI)
AT5G51300(Ensembl)	BAA97393(EMBL-CDS)
Q94KA0(AltAccession)	NP_851169(refSeq)
AK317057(EMBL)	SF1_ARATH(UniProtKB-ID)
SF1{ECO:0000303\|PubMed:24580679}(Symbol)	AT5G51300(Ensembl_TRS)
AT5G51300(Ensembl_PRO)	835204(GeneID)
locus:2176222(TAIR)
Show All

PANTHER Classification

PANTHER Family:	RNA-BINDING PROTEIN RELATED (PTHR11208)
PANTHER Subfamily:	SPLICING FACTOR 1 (PTHR11208:SF45)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	regulation of mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	nucleus
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, protein binding, mRNA binding
GO BP Complete:	RNA splicing, response to abscisic acid, regulation of mRNA splicing, via spliceosome
GO CC Complete:	nucleus, nucleolus, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=12950\|UniProtKB=Q15637	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000003846.6\|UniProtKB=H2Q406	Pan troglodytes	LDO
MACMU\|Ensembl=ENSMMUG00000022606.4\|UniProtKB=H9EPF7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1095403\|UniProtKB=Q64213	Mus musculus	LDO
RAT\|RGD=620645\|UniProtKB=A0A8I6G7I2	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001035.6\|UniProtKB=A2VDM7	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000062583.1\|UniProtKB=A0A287BC34	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000024544.4\|UniProtKB=A0A5F5Q2B0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000012231.6\|UniProtKB=A0A2I2UQY9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845029060.1\|UniProtKB=A0A8I3Q776	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000029407.2\|UniProtKB=K7DZ88	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000002909.2\|UniProtKB=A0A6I8NB81	Ornithorhynchus anatinus	LDO
ANOCA\|Ensembl=ENSACAG00000016404.4\|UniProtKB=H9GN87	Anolis carolinensis	LDO
XENLA\|Gene=sf1.S\|UniProtKB=Q7ZWT3	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-994148\|UniProtKB=Q5M7R7	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011853.2\|UniProtKB=H2M8M8	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-2492\|UniProtKB=A0A0R4IBT0	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002130.1\|UniProtKB=W5M280	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000012483.2\|UniProtKB=F6U5S2	Ciona intestinalis	O
CIOIN\|Ensembl=ENSCING00000005564.3\|UniProtKB=F6URQ9	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118404504\|UniProtKB=A0A9J7HHE2	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC754661\|UniProtKB=A0A7M7ST81	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00013808\|UniProtKB=G5EF97	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00023811\|UniProtKB=A8WN19	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0025571\|UniProtKB=Q9VEJ1	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP000049\|UniProtKB=A0A1S4G8G9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011081\|UniProtKB=D6X4F0	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_303941\|UniProtKB=E9GIM3	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG188150\|UniProtKB=T1FPP8	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG71408\|UniProtKB=T1G0L0	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g162319\|UniProtKB=A7RSV9	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG8175\|UniProtKB=B3SA18	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_37684\|UniProtKB=A9V3A0	Monosiga brevicollis	LDO
YEAST\|SGD=S000004106\|UniProtKB=Q12186	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AGL183C\|UniProtKB=Q750X2	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000178990\|UniProtKB=Q5AED9	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F18370g\|UniProtKB=Q6C187	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_10615\|UniProtKB=C8V9G4	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G10840\|UniProtKB=Q4WXV6	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU04110\|UniProtKB=Q8NIW7	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_07196\|UniProtKB=A7EPE7	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_11729\|UniProtKB=Q0U935	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC962.06c\|UniProtKB=O74555	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00249\|UniProtKB=B6JV47	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND02880\|UniProtKB=P0CO44	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06386\|UniProtKB=Q4P0H7	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_00318\|UniProtKB=E3JQ72	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_8865\|UniProtKB=F4NSY6	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_193510\|UniProtKB=C4M4V3	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0293554\|UniProtKB=Q54BM5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_148524\|UniProtKB=F0ZBC2	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_36_5420\|UniProtKB=Q4Q0L9	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.6k15.1000\|UniProtKB=Q38A35	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_343950\|UniProtKB=A2E7L6	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0623600\|UniProtKB=C6KT72	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00021642001\|UniProtKB=A0DZK7	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00023328001\|UniProtKB=A0E4D7	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_22618\|UniProtKB=B8C249	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GZH0_PHYRM\|UniProtKB=H3GZH0	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_09g386731v5\|UniProtKB=A0A2K3DCF2	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_12g553750v5\|UniProtKB=A0A2K3D5Y8	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00009p00262590\|UniProtKB=W1NHB9	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00095p00106600\|UniProtKB=W1NU59	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00078p00155240\|UniProtKB=W1PA35	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_78G00240\|UniProtKB=A0A0K9NNC4	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_157G00110\|UniProtKB=A0A0K9PXG7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma01_g10800\|UniProtKB=A0A804HSM8	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma05_g27370\|UniProtKB=A0A804J951	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_009477mg\|UniProtKB=K3Y5J0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G183800\|UniProtKB=C5YE34	Sorghum bicolor	LDO
SORBI\|EnsemblGenome=SORBI_3001G409600\|UniProtKB=C5WNL2	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb421010\|UniProtKB=C0PE44	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb085570\|UniProtKB=A0A1D6ECT3	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os04g0385700\|UniProtKB=A0A0P0W9E9	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_5g07850v3\|UniProtKB=I1IX23	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0162410\|UniProtKB=A0A8I6WLD0	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS2A02G282400\|UniProtKB=A0A3B6AZ13	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS2B02G299800\|UniProtKB=A0A3B6C8Y5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS2D02G281200\|UniProtKB=A0A1D5UPH0	Triticum aestivum	LDO
NELNU\|Gene=LOC104608792\|UniProtKB=A0A1U8AY05	Nelumbo nucifera	O
NELNU\|Gene=LOC104602392\|UniProtKB=A0A1U8ANJ2	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110778665\|UniProtKB=A0A9R0HXP3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0800531\|UniProtKB=A0A251RP80	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C300101470\|UniProtKB=A0A9R1XJ36	Lactuca sativa	O
HELAN\|Gene_ORFName=HannXRQ_Chr14g0461281\|UniProtKB=A0A251SM11	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr14g0668501\|UniProtKB=A0A9K3EE50	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200097860\|UniProtKB=A0A9R1XS73	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a020680mg\|UniProtKB=A0A022Q8T3	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001841mg\|UniProtKB=A0A022QTR2	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_14964\|UniProtKB=A0A1U8GX09	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400007237\|UniProtKB=M1AAZ5	Solanum tuberosum	LDO
TOBAC\|Gene=LOC107809458\|UniProtKB=A0A1S4BL20	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107830863\|UniProtKB=A0A1S4DKU7	Nicotiana tabacum	LDO
CAPAN\|EnsemblGenome=T459_09108\|UniProtKB=A0A1U8G0I8	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_09110\|UniProtKB=A0A1U8G1F1	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400018847\|UniProtKB=M1BMJ0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc03g093350.3\|UniProtKB=A0A3Q7GAV8	Solanum lycopersicum	O
TOBAC\|Gene=LOC107785240\|UniProtKB=A0A1S3ZBZ8	Nicotiana tabacum	O
TOBAC\|Gene=LOC107778813\|UniProtKB=A0A1S3YR46	Nicotiana tabacum	O
VITVI\|Gene_OrderedLocusName=VIT_19s0014g01440\|UniProtKB=F6H2P1	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_K00247\|UniProtKB=A0A058ZZB4	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P16220.1\|UniProtKB=A0A078HNA5	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C03P19100.1\|UniProtKB=A0A078H730	Brassica napus	LDO
GOSHI\|Gene=LOC107939826\|UniProtKB=A0A1U8MT24	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107931452\|UniProtKB=A0A1U8LW70	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_014895\|UniProtKB=A0A061G719	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g040243mg\|UniProtKB=A0A067E4D5	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_003G107200v3\|UniProtKB=B9H067	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G126400v3\|UniProtKB=U5GU85	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_06G040900\|UniProtKB=A0A2C9VPX2	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1500890\|UniProtKB=B9R9V5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_09G230800\|UniProtKB=I1L5P7	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_12G005900\|UniProtKB=I1LNT7	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g036415\|UniProtKB=A0A072UK27	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr08_00290\|UniProtKB=A0A2I4FPP4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G022880\|UniProtKB=A0A0A0KXK7	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G275100\|UniProtKB=M5X3P3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_77639\|UniProtKB=D8QRH9	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c7_10890\|UniProtKB=A0A2K1KBA2	Physcomitrella patens	LDO
PHYPA\|EnsemblGenome=Pp3c11_24710\|UniProtKB=A0A2K1JW60	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0009s0189\|UniProtKB=A0A2R6XLX1	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000260370\|UniProtKB=A0A1Y1HQF9	Klebsormidium nitens	LDO