Enhancer Detail Information

Enhancer: 13993
Chromosome Location: chr12:48227481-48227636
Source: FANTOM

Gene: HUMAN|HGNC=14067|UniProtKB=Q8WUI4 (HDAC7)
Tissue Assay pValue SNP zScore CDFScore
A549 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Caki2 (epithelial; Kidney; carcinoma) Topologically Associated Domain - - - -
G401 (epithelial; Kidney; rhabdoid tumor) Topologically Associated Domain - - - -
LNCap_clone_FGC (epithelial; Prostate; carcinoma) Topologically Associated Domain - - - -
NCI-H460 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Panc1 (epithelial; Pancreas; carcinoma) Topologically Associated Domain - - - -
RPMI-7951 (epithelial; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SJCRH30 (fibroblast; Muscle; rhabdomyosarcoma) Topologically Associated Domain - - - -
SK-MEL-5 (melanoma; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SK-N-DZ_not_treated_and_treated_with_dimethyl_sulfoxide (neuroblast; Brain; neuroblastoma) Topologically Associated Domain - - - -
SK-N-MC (epithelial; Brain; neuroepithelioma) Topologically Associated Domain - - - -
T47D (epithelial; Mammary gland; carcinoma) Topologically Associated Domain - - - -
ACHN (epithelial; Kidney; renal cell adenocarcinoma) Topologically Associated Domain - - - -
DLD1 (epithelial; Colon; colorectal adenocarcinoma) Topologically Associated Domain - - - -
astrocyte_of_the_cerebellum (astrocyte; Cerebellum) Topologically Associated Domain - - - -
brain_microvascular_endothelial_cell (microvascular endothelium; Brain) Topologically Associated Domain - - - -
brain_pericyte (pericyte; Brain) Topologically Associated Domain - - - -
endometrial_microvascular_endothelial_cells (microvascular endothelium; Uterine endometrium) Topologically Associated Domain - - - -
endothelial_cell_of_hepatic_sinusoid (endothelial; Liver) Topologically Associated Domain - - - -
GM12878 (B-lymphocyte; Blood; normal) interaction TAD 5.7e-08 - - -
HMEC (epithelial; Breast; normal) interaction TAD 0 - - -
HUVEC (endothelial; Umbilical; normal) interaction TAD 7.1e-06 - - -
K562 (lymphoblast; Bone marrow; leukemia) interaction TAD 5.5e-13 - 7.17 .99
KBM7 (blood cell; Bone marrow; leukemia) interaction TAD 2.6e-06 - - -
HepG2 (epithelial; Liver; carcinoma) - - - -.42 .51
HCT116 (epithelial; colon; colorectal carcinoma) - - - 7.17 .87
MCF7 (epithelial; Mammary gland; adenocarcinoma) - - - -.53 .35


Gene: HUMAN|HGNC=16629|UniProtKB=O95398 (RAPGEF3)
Tissue Assay pValue SNP zScore CDFScore
A549 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Caki2 (epithelial; Kidney; carcinoma) Topologically Associated Domain - - - -
G401 (epithelial; Kidney; rhabdoid tumor) Topologically Associated Domain - - - -
LNCap_clone_FGC (epithelial; Prostate; carcinoma) Topologically Associated Domain - - - -
NCI-H460 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Panc1 (epithelial; Pancreas; carcinoma) Topologically Associated Domain - - - -
RPMI-7951 (epithelial; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SJCRH30 (fibroblast; Muscle; rhabdomyosarcoma) Topologically Associated Domain - - - -
SK-MEL-5 (melanoma; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SK-N-DZ_not_treated_and_treated_with_dimethyl_sulfoxide (neuroblast; Brain; neuroblastoma) Topologically Associated Domain - - - -
SK-N-MC (epithelial; Brain; neuroepithelioma) Topologically Associated Domain - - - -
T47D (epithelial; Mammary gland; carcinoma) Topologically Associated Domain - - - -
ACHN (epithelial; Kidney; renal cell adenocarcinoma) Topologically Associated Domain - - - -
astrocyte_of_the_cerebellum (astrocyte; Cerebellum) Topologically Associated Domain - - - -
endometrial_microvascular_endothelial_cells (microvascular endothelium; Uterine endometrium) Topologically Associated Domain - - - -
endothelial_cell_of_hepatic_sinusoid (endothelial; Liver) Topologically Associated Domain - - - -
GM12878 (B-lymphocyte; Blood; normal) interaction TAD 2.8e-07 - - -
HUVEC (endothelial; Umbilical; normal) interaction TAD 6.5e-09 - - -
K562 (lymphoblast; Bone marrow; leukemia) interaction TAD 1.5e-09 - 7.25 1.00
KBM7 (blood cell; Bone marrow; leukemia) interaction TAD 2.6e-05 - - -
HepG2 (epithelial; Liver; carcinoma) - - - -.56 .24
HCT116 (epithelial; colon; colorectal carcinoma) - - - 7.25 .42
MCF7 (epithelial; Mammary gland; adenocarcinoma) - - - -.72 .18


Gene: HUMAN|HGNC=14369|UniProtKB=P21128 (ENDOU)
Tissue Assay pValue SNP zScore CDFScore
A549 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Caki2 (epithelial; Kidney; carcinoma) Topologically Associated Domain - - - -
G401 (epithelial; Kidney; rhabdoid tumor) Topologically Associated Domain - - - -
LNCap_clone_FGC (epithelial; Prostate; carcinoma) Topologically Associated Domain - - - -
NCI-H460 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Panc1 (epithelial; Pancreas; carcinoma) Topologically Associated Domain - - - -
RPMI-7951 (epithelial; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SJCRH30 (fibroblast; Muscle; rhabdomyosarcoma) Topologically Associated Domain - - - -
SK-N-DZ_not_treated_and_treated_with_dimethyl_sulfoxide (neuroblast; Brain; neuroblastoma) Topologically Associated Domain - - - -
SK-N-MC (epithelial; Brain; neuroepithelioma) Topologically Associated Domain - - - -
T47D (epithelial; Mammary gland; carcinoma) Topologically Associated Domain - - - -
astrocyte_of_the_cerebellum (astrocyte; Cerebellum) Topologically Associated Domain - - - -
GM12878 (B-lymphocyte; Blood; normal) interaction TAD 7.9e-09 - - -
HMEC (epithelial; Breast; normal) interaction TAD 7e-08 - - -
HUVEC (endothelial; Umbilical; normal) interaction TAD 1.1e-14 - - -
IMR90 (fibroblast; Lung; normal) interaction TAD 4.1e-08 - - -
K562 (lymphoblast; Bone marrow; leukemia) interaction TAD 5.3e-15 - 7.22 1.00
KBM7 (blood cell; Bone marrow; leukemia) interaction TAD 6.9e-09 - - -
HepG2 (epithelial; Liver; carcinoma) - - - -.56 .24
HCT116 (epithelial; colon; colorectal carcinoma) - - - 7.22 .42
MCF7 (epithelial; Mammary gland; adenocarcinoma) - - - -.72 .18


Gene: HUMAN|HGNC=26035|UniProtKB=Q6P1K1 (SLC48A1)
Tissue Assay pValue SNP zScore CDFScore
A549 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Caki2 (epithelial; Kidney; carcinoma) Topologically Associated Domain - - - -
G401 (epithelial; Kidney; rhabdoid tumor) Topologically Associated Domain - - - -
LNCap_clone_FGC (epithelial; Prostate; carcinoma) Topologically Associated Domain - - - -
NCI-H460 (epithelial; Lung; carcinoma) Topologically Associated Domain - - - -
Panc1 (epithelial; Pancreas; carcinoma) Topologically Associated Domain - - - -
RPMI-7951 (epithelial; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SJCRH30 (fibroblast; Muscle; rhabdomyosarcoma) Topologically Associated Domain - - - -
SK-MEL-5 (melanoma; Skin; Malignant melanoma) Topologically Associated Domain - - - -
SK-N-DZ_not_treated_and_treated_with_dimethyl_sulfoxide (neuroblast; Brain; neuroblastoma) Topologically Associated Domain - - - -
SK-N-MC (epithelial; Brain; neuroepithelioma) Topologically Associated Domain - - - -
T47D (epithelial; Mammary gland; carcinoma) Topologically Associated Domain - - - -
ACHN (epithelial; Kidney; renal cell adenocarcinoma) Topologically Associated Domain - - - -
DLD1 (epithelial; Colon; colorectal adenocarcinoma) Topologically Associated Domain - - - -
astrocyte_of_the_cerebellum (astrocyte; Cerebellum) Topologically Associated Domain - - - -
brain_pericyte (pericyte; Brain) Topologically Associated Domain - - - -
endometrial_microvascular_endothelial_cells (microvascular endothelium; Uterine endometrium) Topologically Associated Domain - - - -
endothelial_cell_of_hepatic_sinusoid (endothelial; Liver) Topologically Associated Domain - - - -
GM12878 (B-lymphocyte; Blood; normal) interaction TAD 2.8e-07 - - -
HUVEC (endothelial; Umbilical; normal) interaction TAD 6.5e-09 - - -
K562 (lymphoblast; Bone marrow; leukemia) interaction TAD 1.5e-09 - 7.22 1.00
KBM7 (blood cell; Bone marrow; leukemia) interaction TAD 2.6e-05 - - -
HepG2 (epithelial; Liver; carcinoma) - - - -.56 .24
HCT116 (epithelial; colon; colorectal carcinoma) - - - 7.22 .01
MCF7 (epithelial; Mammary gland; adenocarcinoma) - - - -.72 .18