PANTHER Gene Information

Gene Symbol(s):

AMTR_s00016p00109400

Organism:

Amborella trichopoda

View Gene in Tree

Tree

Gene Name:

RING-type domain-containing protein

Gene ID:

AMTR_s00016p00109400

Protein ID:

W1PDZ2

Persistent Id:

PTN004396805

Alternate Ids:

W1PDZ2(Synonym)	18434348(GeneID)
KI393908(EMBL)	ERN06158(EMBL-CDS)
XP_006844483(refSeq)	AMTR_s00016p00109400(Ensembl)
W1PDZ2_AMBTC(UniProtKB-ID)	586698954(GI)
Show All

PANTHER Classification

PANTHER Family:	RING FINGER 10 FAMILY MEMBER (PTHR12983)
PANTHER Subfamily:	E3 UBIQUITIN-PROTEIN LIGASE RNF10 (PTHR12983:SF9)
PANTHER GO-slim Molecular Function:	transcription cis-regulatory region binding
PANTHER GO-slim Biological Process:	positive regulation of transcription by RNA polymerase II
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	metal ion binding, transcription cis-regulatory region binding
GO BP Complete:	positive regulation of transcription by RNA polymerase II
GO CC Complete:	cytoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=10055\|UniProtKB=Q8N5U6	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000005541.5\|UniProtKB=H2Q715	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000013495.3\|UniProtKB=G3S990	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000004223.4\|UniProtKB=G7N5Z2	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1859162\|UniProtKB=Q3UIW5	Mus musculus	LDO
RAT\|RGD=1309282\|UniProtKB=Q5XI59	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000015767\|UniProtKB=Q08E13	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000009910.5\|UniProtKB=F1RJI6	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000012725.4\|UniProtKB=F6R912	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000033733.3\|UniProtKB=A0A2I2UUA9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845029907.1\|UniProtKB=A0A8I3Q1R0	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000003111.4\|UniProtKB=F6S3G1	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000001790.4\|UniProtKB=A0A6I8NL11	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010023102.1\|UniProtKB=A0A8V0ZTB6	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000002995.3\|UniProtKB=H9G706	Anolis carolinensis	LDO
XENLA\|Gene=rnf10.L\|UniProtKB=A0A1L8I0B4	Xenopus laevis	O
XENLA\|Gene=rnf10\|UniProtKB=Q32NQ8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-854662\|UniProtKB=A0A6I8PPQ3	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000014788.2\|UniProtKB=H2MIQ6	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-2969\|UniProtKB=B0UXR5	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000002934.1\|UniProtKB=W5M502	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000002723.3\|UniProtKB=F6UCW1	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118425686\|UniProtKB=A0A9J7LWV7	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC574604\|UniProtKB=A0A7M7T1V8	Strongylocentrotus purpuratus	LDO
DROME\|FlyBase=FBgn0035232\|UniProtKB=Q9W0D8	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP007954\|UniProtKB=Q7Q3M8	Anopheles gambiae	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_306980\|UniProtKB=E9H0B1	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW003817\|UniProtKB=B7PIG8	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG191771\|UniProtKB=T1FTA9	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g239220\|UniProtKB=A7RLV2	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG59741\|UniProtKB=B3S6B0	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_26070\|UniProtKB=A9V1A2	Monosiga brevicollis	LDO
YEAST\|SGD=S000004419\|UniProtKB=Q06436	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER113W\|UniProtKB=Q757A0	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000197496\|UniProtKB=Q59UP4	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_B03300g\|UniProtKB=Q6CFV7	Yarrowia lipolytica	O
YARLI\|EnsemblGenome=YALI0_A19514g\|UniProtKB=Q6CGG7	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_05185\|UniProtKB=C8VF59	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_1G07150\|UniProtKB=Q4WJ58	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU11263\|UniProtKB=V5IN80	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_04856\|UniProtKB=A7EHR4	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_00157\|UniProtKB=Q0V757	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBP8B7.23\|UniProtKB=O94271	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02415\|UniProtKB=B6K2E7	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND00580\|UniProtKB=Q5KJ57	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_02623\|UniProtKB=A0A0D1E485	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_03401\|UniProtKB=E3JZH0	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_89681\|UniProtKB=F4P6G6	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_052080\|UniProtKB=C4M849	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0269996\|UniProtKB=Q55CM6	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_159888\|UniProtKB=F1A576	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_08_1215\|UniProtKB=Q4QI41	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.5.3070\|UniProtKB=Q57Z86	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_082580\|UniProtKB=A2FP95	Trichomonas vaginalis	LDO
TRIV3\|Gene_ORFName=TVAG_038490\|UniProtKB=A2DY05	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_257890\|UniProtKB=A2GM06	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1012000\|UniProtKB=Q8IJS5	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00020168001\|UniProtKB=A0DTW8	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00022392001\|UniProtKB=A0E1Q4	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_23086\|UniProtKB=B8C5N6	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GW59_PHYRM\|UniProtKB=H3GW59	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_16g681251v5\|UniProtKB=A0A2K3CV22	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_03g144687v5\|UniProtKB=A0A2K3DV51	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_27G00240\|UniProtKB=A0A0K9PFE6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g21810\|UniProtKB=A0A804JIY0	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_016432mg\|UniProtKB=K3YQ90	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G158200\|UniProtKB=C5XT84	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb242020\|UniProtKB=C0PG91	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0516600\|UniProtKB=Q67UM6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g44347v3\|UniProtKB=I1IA08	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0461110\|UniProtKB=F2E0U6	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS5D02G139400\|UniProtKB=A0A3B6MMM9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G133900\|UniProtKB=A0A3B6LJG7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G135100\|UniProtKB=A0A3B6KFS5	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_009264\|UniProtKB=A0A1U8Q2S6	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110778857\|UniProtKB=A0A9R0HYA4	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0802781\|UniProtKB=A0A9K3DKB3	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr17g0802741\|UniProtKB=A0A251RPM0	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300143350\|UniProtKB=A0A9R1XP57	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002265mg\|UniProtKB=A0A022R7I4	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc02g094510.3\|UniProtKB=A0A3Q7G0L2	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107779605\|UniProtKB=A0A1S3YTL6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107776832\|UniProtKB=A0A1S3YJ42	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_14s0068g01130\|UniProtKB=F6H430	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_I01601\|UniProtKB=A0A059APK1	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00040452001\|UniProtKB=A0A078GTW8	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00092175001\|UniProtKB=A0A078IG63	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra032944\|UniProtKB=M4EVW1	Brassica campestris	LDO
ARATH\|TAIR=locus=2090827\|UniProtKB=Q9LSE3	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107897319\|UniProtKB=A0A1U8IJG4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107914178\|UniProtKB=A0A1U8KBX2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_017344\|UniProtKB=A0A061EE74	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g003879mg\|UniProtKB=A0A067DX27	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G145300v3\|UniProtKB=B9IA77	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_11G077000\|UniProtKB=A0A2C9UZF8	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1445270\|UniProtKB=B9RGY2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_16G048700\|UniProtKB=A0A0R0FLJ5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G103000\|UniProtKB=K7MXM8	Glycine max	LDO
JUGRE\|EnsemblGenome=Jr01_00950\|UniProtKB=A0A2I4FQY8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G599440\|UniProtKB=A0A0A0LBB9	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G313200\|UniProtKB=A0A251Q8A3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_442720\|UniProtKB=D8RVJ3	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_443565\|UniProtKB=D8S292	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c20_8910\|UniProtKB=A0A2K1IUM1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0006s0082\|UniProtKB=A0A2R6XPK7	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_011170020\|UniProtKB=A0A1Y1IQ04	Klebsormidium nitens	LDO