PANTHER Gene Information

Gene Symbol(s):

AMTR_s00056p00184430

Organism:

Amborella trichopoda

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Gene Name:

RecA family profile 1 domain-containing protein

Gene ID:

AMTR_s00056p00184430

Protein ID:

U5CYH3

Persistent Id:

PTN004949349

Alternate Ids:

KI392510(EMBL)	548857408(GI)
U5CYH3(Synonym)	ERN15214(EMBL-CDS)
U5CYH3_AMBTC(UniProtKB-ID)	AMTR_s00056p00184430(Ensembl)
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PANTHER Classification

PANTHER Family:	DNA REPAIR PROTEIN RADA (PTHR32472)
PANTHER Subfamily:	DNA REPAIR PROTEIN RADA-LIKE PROTEIN (PTHR32472:SF10)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	recombinational repair
PANTHER GO-slim Cellular Component:
PANTHER protein class:	DNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	ATP hydrolysis activity, DNA binding, ATP binding, ATP-dependent DNA damage sensor activity, damaged DNA binding, hydrolase activity
GO BP Complete:	DNA repair, recombinational repair
GO CC Complete:	-

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
THAPS\|EnsemblGenome=THAPSDRAFT_262474\|UniProtKB=B8C2F0	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G7E5_PHYRM\|UniProtKB=H3G7E5	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_07g317908v5\|UniProtKB=A0A2K3DIU2	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_5G01770\|UniProtKB=A0A0K9NWF5	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g10550\|UniProtKB=A0A804JUD2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_006028mg\|UniProtKB=K3XVS0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3010G041000\|UniProtKB=C5Z4B9	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb270700\|UniProtKB=A0A804PU05	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os06g0151600\|UniProtKB=Q76B91	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g49306v3\|UniProtKB=A0A2K2DQI6	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_1g49303v3\|UniProtKB=A0A2K2DQJ0	Brachypodium distachyon	LDO
BRADI\|EnsemblGenome=BRADI_1g54900v3\|UniProtKB=A0A2K2DRG0	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0651500\|UniProtKB=A0A8I6YBI3	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G100800\|UniProtKB=A0A3B6TKL4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G005400\|UniProtKB=A0A3B6SBE3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G106700\|UniProtKB=A0A3B6RDB0	Triticum aestivum	LDO
NELNU\|Gene=LOC104588248\|UniProtKB=A0A1U7YXY4	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110781855\|UniProtKB=A0A9R0JPA2	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0208031\|UniProtKB=A0A251UPC3	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900494120\|UniProtKB=A0A9R1WVT0	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C400195650\|UniProtKB=A0A9R1VUT5	Lactuca sativa	LDO
CAPAN\|EnsemblGenome=T459_11041\|UniProtKB=A0A1U8FU11	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400002521\|UniProtKB=M0ZRE1	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc03g121120.3\|UniProtKB=A0A3Q7FVG0	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107793634\|UniProtKB=A0A1S4A4H5	Nicotiana tabacum	O
TOBAC\|Gene=LOC107830621\|UniProtKB=A0A1S4DK12	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi09g04074\|UniProtKB=D7U088	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi09g00270\|UniProtKB=F6HY77	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J02926\|UniProtKB=A0A059AII9	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_J02692\|UniProtKB=A0A059AJ95	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00055908001\|UniProtKB=A0A078HB68	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra000620\|UniProtKB=M4C8U2	Brassica campestris	LDO
ARATH\|TAIR=locus=2177497\|UniProtKB=F4K8X8	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107897358\|UniProtKB=A0A1U8IJL2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_028919\|UniProtKB=A0A061GCS3	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g007957mg\|UniProtKB=A0A067EPF1	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_001G191200\|UniProtKB=A0A3N7ECV6	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_T147100v3\|UniProtKB=A0A2K1R577	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_11G031600\|UniProtKB=A0A2C9UXM8	Manihot esculenta	LDO
SOYBN\|EnsemblGenome=GLYMA_15G021000\|UniProtKB=K7M933	Glycine max	O
MEDTR\|EnsemblGenome=MTR_2g100640\|UniProtKB=G7IHX8	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_08G199700\|UniProtKB=I1KV06	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g014670\|UniProtKB=G7LGQ6	Medicago truncatula	LDO
JUGRE\|Gene=LOC108983790\|UniProtKB=A0A6P9EJZ2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G434980\|UniProtKB=A0A0A0LBL7	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G056500\|UniProtKB=A0A251PVW3	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_416617\|UniProtKB=D8RZV8	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_416656\|UniProtKB=D8RZZ9	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_416615\|UniProtKB=D8RZV6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_416649\|UniProtKB=D8RZZ2	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_105715\|UniProtKB=D8RZX9	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_98813\|UniProtKB=D8RQV9	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c1_36770\|UniProtKB=A0A2K1LB73	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0008s0091\|UniProtKB=A0A2R6XMH4	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001010120\|UniProtKB=A0A1Y1I020	Klebsormidium nitens	LDO
PYRAE\|EnsemblGenome=PAE2048\|UniProtKB=Q8ZVZ7	Pyrobaculum aerophilum	O
PYRAE\|EnsemblGenome=PAE3057\|UniProtKB=Q8ZTW8	Pyrobaculum aerophilum	O
PYRAE\|EnsemblGenome=PAE2799\|UniProtKB=Q8ZUG1	Pyrobaculum aerophilum	O
PYRAE\|EnsemblGenome=PAE2044\|UniProtKB=Q8ZVZ9	Pyrobaculum aerophilum	LDO
CHLAA\|EnsemblGenome=Caur_0447\|UniProtKB=A9WE37	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO3351\|UniProtKB=Q9X8L5	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv3585\|UniProtKB=P9WHJ9	Mycobacterium tuberculosis	LDO
CLOBH\|Gene_OrderedLocusName=CBO3508\|UniProtKB=A5I7N5	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0025\|UniProtKB=Q8DRP0	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_00507\|UniProtKB=Q2G243	Staphylococcus aureus	LDO
LISMO\|EnsemblGenome=CAD00760\|UniProtKB=Q48761	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_00870\|UniProtKB=P37572	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_0103\|UniProtKB=Q81J65	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_0199\|UniProtKB=Q9WY42	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_1105\|UniProtKB=Q9RVC4	Deinococcus radiodurans	LDO
GLOVI\|Gene=radA\|UniProtKB=Q7NHX9	Gloeobacter violaceus	LDO
SYNY3\|EnsemblGenome=BAA18488\|UniProtKB=P74391	Synechocystis	LDO
LEPIN\|EnsemblGenome=LA_2916\|UniProtKB=Q8F261	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_2406\|UniProtKB=Q8A538	Bacteroides thetaiotaomicron	LDO
CHLTR\|EnsemblGenome=CT_298\|UniProtKB=O84300	Chlamydia trachomatis	LDO
AQUAE\|EnsemblGenome=aq_552\|UniProtKB=O66827	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A1557\|UniProtKB=B5YGF5	Thermodesulfovibrio yellowstonii	LDO
DICTD\|EnsemblGenome=Dtur_1479\|UniProtKB=B8E116	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN0157\|UniProtKB=Q8RGX0	Fusobacterium nucleatum	LDO
HELPY\|EnsemblGenome=HP_0223\|UniProtKB=P56148	Helicobacter pylori	LDO
NEIMB\|EnsemblGenome=NMB0782\|UniProtKB=Q9K040	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU0285\|UniProtKB=Q74GG1	Geobacter sulfurreducens	LDO
BRADU\|Gene=radA\|UniProtKB=Q89MY0	Bradyrhizobium diazoefficiens	LDO
COXBU\|EnsemblGenome=CBU_1422\|UniProtKB=Q83BT0	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_1597\|UniProtKB=P45266	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_1226\|UniProtKB=Q8EHJ5	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_2343\|UniProtKB=Q9KPM4	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC1164\|UniProtKB=Q8PBF8	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA4609\|UniProtKB=P96963	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM4579\|UniProtKB=P24517	Salmonella typhimurium	LDO
YERPE\|Gene_OrderedLocusName=YPO0443\|UniProtKB=A0A2U2H3E7	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE78378\|UniProtKB=P24554	Escherichia coli	LDO