PANTHER Gene Information

Gene Symbol(s):

AMTR_s00061p00142700

Organism:

Amborella trichopoda

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Gene Name:

RRM domain-containing protein

Gene ID:

AMTR_s00061p00142700

Protein ID:

U5D9F0

Persistent Id:

PTN004470655

Alternate Ids:

18447488(GeneID)	U5D9F0_AMBTC(UniProtKB-ID)
ERN19114(EMBL-CDS)	U5D9F0(Synonym)
AMTR_s00061p00142700(Ensembl)	KI392075(EMBL)
XM_006857585(refSeq)	586776022(GI)
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PANTHER Classification

PANTHER Family:	OS02G0815200 PROTEIN (PTHR48025)
PANTHER Subfamily:	31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC-RELATED (PTHR48025:SF3)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	rRNA processing
PANTHER GO-slim Cellular Component:	chloroplast thylakoid membrane
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding, mRNA binding
GO BP Complete:	chloroplast rRNA processing, mRNA processing
GO CC Complete:	chloroplast, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BOVIN\|Gene=RBM14\|UniProtKB=Q5EA36	Bos taurus	O
XENLA\|Gene=rbm14.L\|UniProtKB=Q32N78	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-491627\|UniProtKB=Q6P885	Xenopus tropicalis	O
HORSE\|Ensembl=ENSECAG00000022361.4\|UniProtKB=A0A9L0RBP3	Equus caballus	O
XENLA\|Gene=tial1.L\|UniProtKB=A0A1L8FIA8	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000045788\|UniProtKB=Q28BS8	Xenopus tropicalis	O
XENLA\|Gene=tia1.L\|UniProtKB=Q68EU5	Xenopus laevis	O
XENTR\|Gene=tia1\|UniProtKB=A0A8J0SI21	Xenopus tropicalis	O
HUMAN\|HGNC=17940\|UniProtKB=Q9P2K5	Homo sapiens	O
HUMAN\|HGNC=5046\|UniProtKB=P52272	Homo sapiens	O
RAT\|RGD=1306891\|UniProtKB=D4A1W5	Rattus norvegicus	O
MONDO\|Ensembl=ENSMODG00000005250.4\|UniProtKB=A0A5F8GJ19	Monodelphis domestica	O
ANOCA\|Ensembl=ENSACAG00000041135.1\|UniProtKB=A0A803SNY1	Anolis carolinensis	O
XENLA\|Gene=tdrd10.L\|UniProtKB=A0A8J1LJJ0	Xenopus laevis	O
XENTR\|Gene=tdrd10\|UniProtKB=A0A8J0R8L7	Xenopus tropicalis	O
XENLA\|Gene=rbm4b.L\|UniProtKB=Q640I0	Xenopus laevis	O
XENLA\|Gene=rbm4b.S\|UniProtKB=Q6GPD7	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-494431\|UniProtKB=Q6P4L3	Xenopus tropicalis	O
LEPOC\|Ensembl=ENSLOCG00000002772.1\|UniProtKB=W5M4F1	lepisosteus oculatus	O
BRAFL\|Gene=LOC118431372\|UniProtKB=A0A9J7MCP0	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC586576\|UniProtKB=A0A7M7HPC9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00022771\|UniProtKB=D0G911	Caenorhabditis elegans	O
ANOGA\|EnsemblGenome=AGAP028511\|UniProtKB=A0A0E4G8F0	Anopheles gambiae	O
IXOSC\|EnsemblGenome=ISCW021980\|UniProtKB=B7QFY7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG73589\|UniProtKB=T1G1G2	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g246176\|UniProtKB=A7SMB3	Nematostella vectensis	O
SCHJY\|EnsemblGenome=SJAG_01469\|UniProtKB=B6JY09	Schizosaccharomyces japonicus	O
SCHJY\|EnsemblGenome=SJAG_03283\|UniProtKB=B6K3U2	Schizosaccharomyces japonicus	O
USTMA\|EnsemblGenome=UMAG_00254\|UniProtKB=A0A0D1E7F4	Ustilago maydis	O
USTMA\|EnsemblGenome=UMAG_10723\|UniProtKB=A0A0D1DR22	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_13383\|UniProtKB=E3KS89	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_00626\|UniProtKB=E3JQH9	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_22812\|UniProtKB=F4NVV2	Batrachochytrium dendrobatidis	O
DICDI\|dictyBase=DDB_G0284167\|UniProtKB=Q54Q30	Dictyostelium discoideum	O
TRIV3\|Gene_ORFName=TVAG_043050\|UniProtKB=A2F6R9	Trichomonas vaginalis	O
ZOSMR\|Gene_ORFName=ZOSMA_29G00440\|UniProtKB=A0A0K9PDT7	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_79G00160\|UniProtKB=A0A0K9NQE6	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_56G00340\|UniProtKB=A0A0K9NVY1	Zostera marina	O
MUSAM\|EnsemblGenome=Ma05_g27830\|UniProtKB=A0A804J9A7	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma11_g13770\|UniProtKB=A0A804L7K0	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma02_g02380\|UniProtKB=A0A804HYH0	Musa acuminata subsp. malaccensis	O
SORBI\|EnsemblGenome=SORBI_3007G171800\|UniProtKB=C5YN98	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb176260\|UniProtKB=K7TYJ1	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb039630\|UniProtKB=B4F8L8	Zea mays	O
ORYSJ\|EnsemblGenome=Os08g0557100\|UniProtKB=Q6ZJ16	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g42700v3\|UniProtKB=I1I9E3	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0689040\|UniProtKB=A0A8I6YCY0	Hordeum vulgare subsp. vulgare	O
SETIT\|EnsemblGenome=SETIT_024033mg\|UniProtKB=K3ZBW0	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3002G131700\|UniProtKB=A0A1W0W3M4	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb306930\|UniProtKB=Q41834	Zea mays	O
ORYSJ\|EnsemblGenome=Os09g0565200\|UniProtKB=Q650W6	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_2g16227v3\|UniProtKB=A0A2K2D8U9	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0507230\|UniProtKB=F2CRA3	Hordeum vulgare subsp. vulgare	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0655111\|UniProtKB=A0A251SKX4	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr07g0307101\|UniProtKB=A0A251UFA4	Helianthus annuus	O
PRUPE\|EnsemblGenome=PRUPE_5G162300\|UniProtKB=M5WUZ5	Prunus persica	O
LACSA\|Gene_ORFName=LSAT_V11C400178170\|UniProtKB=A0A9R1VYN8	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C400214490\|UniProtKB=A0A9R1VSE5	Lactuca sativa	O
TOBAC\|Gene=LOC107774439\|UniProtKB=A0A1S3YB66	Nicotiana tabacum	O
TOBAC\|Gene=LOC107769683\|UniProtKB=A0A1S3XX03	Nicotiana tabacum	O
TOBAC\|Gene=LOC107790472\|UniProtKB=A0A1S3ZU32	Nicotiana tabacum	O
TOBAC\|Gene=LOC107787074\|UniProtKB=A0A1S3ZIC0	Nicotiana tabacum	O
TOBAC\|Gene=LOC107772527\|UniProtKB=A0A1S3Y6H3	Nicotiana tabacum	O
CITSI\|Gene_ORFName=CISIN_1g040490mg\|UniProtKB=A0A067E179	Citrus sinensis	O
SPIOL\|Gene=ROC1_SPIOL\|UniProtKB=P28644	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr08g0354531\|UniProtKB=A0A251U871	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C500234050\|UniProtKB=A0A9R1XAX9	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a010790mg\|UniProtKB=A0A022Q4S0	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a011024mg\|UniProtKB=A0A022PSE8	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a011418mg\|UniProtKB=A0A022RXW0	Erythranthe guttata	O
VITVI\|EnsemblGenome=Vitvi17g00958\|UniProtKB=F6GTQ4	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi14g01655\|UniProtKB=F6HUS8	Vitis vinifera	O
BRACM\|EnsemblGenome=Bra019210\|UniProtKB=M4DRR7	Brassica campestris	O
BRACM\|EnsemblGenome=Bra013832\|UniProtKB=M4DBH2	Brassica campestris	O
BRACM\|EnsemblGenome=Bra010483\|UniProtKB=M4D1Y3	Brassica campestris	O
ARATH\|TAIR=locus=2157702\|UniProtKB=Q9FGS0	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2122009\|UniProtKB=Q04836	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107949724\|UniProtKB=A0A1U8NLP4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107953551\|UniProtKB=A0A1U8NZI6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107887283\|UniProtKB=A0A1U8HLN1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107926706\|UniProtKB=A0A1U8LEU1	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_014513\|UniProtKB=A0A061FZI8	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g017842mg\|UniProtKB=A0A067FPY2	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_015G086500v3\|UniProtKB=A0A2K1XK53	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_001G340800v3\|UniProtKB=A9PG08	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_012G090200v3\|UniProtKB=A0A2K1YB50	Populus trichocarpa	O
RICCO\|Gene_ORFName=RCOM_1508030\|UniProtKB=B9RAR1	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_05G043200\|UniProtKB=A0A0R0JQU1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_17G125700\|UniProtKB=C6F119	Glycine max	O
MEDTR\|EnsemblGenome=MTR_4g104470\|UniProtKB=A0A072UQW2	Medicago truncatula	O
SOYBN\|EnsemblGenome=GLYMA_04G190100\|UniProtKB=I1JXD6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_06G175400\|UniProtKB=C6TIJ0	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g075500\|UniProtKB=A0A072VA05	Medicago truncatula	O
CUCSA\|EnsemblGenome=Csa_1G002890\|UniProtKB=A0A0A0LNS8	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_3G295800\|UniProtKB=M5X5V4	Prunus persica	O
PHYPA\|EnsemblGenome=Pp3c24_17170\|UniProtKB=A0A2K1IH50	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c13_15440\|UniProtKB=A0A7I4AKX9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c24_17150\|UniProtKB=A0A2K1IH48	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c8_16740\|UniProtKB=A0A2K1K7L6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c12_9890\|UniProtKB=A0A2K1JQ71	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0006s0092\|UniProtKB=A0A2R6XPL7	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0042s0009\|UniProtKB=A0A2R6X1G2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0168s0008\|UniProtKB=A0A2R6W3A4	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0183s0014\|UniProtKB=A0A2R6W1T2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0012s0133\|UniProtKB=A0A2R6XJB8	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000500340\|UniProtKB=A0A1Y1HTE6	Klebsormidium nitens	O