PANTHER Gene Information

Gene Symbol(s):

AMTR_s00077p00108560

Organism:

Amborella trichopoda

View Gene in Tree

Tree

Gene Name:

C3H1-type domain-containing protein

Gene ID:

AMTR_s00077p00108560

Protein ID:

W1P9C4

Persistent Id:

PTN004394047

Alternate Ids:

769814127(GI)	18432339(GeneID)
XM_011624366(refSeq)	AMTR_s00077p00108560(Ensembl)
ERN04186(EMBL-CDS)	W1P9C4_AMBTC(UniProtKB-ID)
W1P9C4(Synonym)	KI394293(EMBL)
Show All

PANTHER Classification

PANTHER Family:	ZINC FINGER PROTEIN 183 (PTHR12930)
PANTHER Subfamily:	RING FINGER PROTEIN 113B (PTHR12930:SF0)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	ncRNA processing RNA splicing
PANTHER GO-slim Cellular Component:	U2-type spliceosomal complex
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	DNA binding, metal ion binding
GO BP Complete:	snoRNA splicing
GO CC Complete:	U2-type spliceosomal complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=17267\|UniProtKB=Q8IZP6	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000005987.4\|UniProtKB=H2Q7R0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000023052.2\|UniProtKB=G3RML9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000054368.1\|UniProtKB=A0A5F8AAN5	Macaca mulatta	O
HUMAN\|HGNC=12974\|UniProtKB=O15541	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000022231.2\|UniProtKB=H2QZ23	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000002324.3\|UniProtKB=G3QIS1	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000020223.4\|UniProtKB=F6V216	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1913631\|UniProtKB=Q14B01	Mus musculus	LDO
RAT\|RGD=1303128\|UniProtKB=Q67ER1	Rattus norvegicus	LDO
MOUSE\|MGI=MGI=1917192\|UniProtKB=Q8R3P8	Mus musculus	LDO
RAT\|RGD=1359693\|UniProtKB=Q5PPN1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000008684.4\|UniProtKB=E1BF77	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000006034.4\|UniProtKB=A0A140T863	Bos taurus	LDO
BOVIN\|Gene=RNF113A\|UniProtKB=Q67ER4	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000032973.2\|UniProtKB=A0A287BM93	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000004638.3\|UniProtKB=F6SAN1	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000003934.3\|UniProtKB=F6XY35	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000028962.4\|UniProtKB=M3X6Z8	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000024392.3\|UniProtKB=M3WQG9	Felis catus	O
FELCA\|Ensembl=ENSFCAG00000025700.3\|UniProtKB=M3X1H5	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845002314.1\|UniProtKB=A0A8I3N1Q1	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845021403.1\|UniProtKB=A0A8I3PFD4	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000048157.1\|UniProtKB=A0A5F8GS30	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000002592.4\|UniProtKB=F7E8Y2	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010021651.1\|UniProtKB=A0A8V0ZLA4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000012485.4\|UniProtKB=G1KMH1	Anolis carolinensis	LDO
XENLA\|Gene=rnf113a.S\|UniProtKB=A3KND7	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-6085683\|UniProtKB=Q28EQ7	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000002442.2\|UniProtKB=H2LAW6	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040825-1\|UniProtKB=Q6DRF0	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000011785.1\|UniProtKB=W5N1K5	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000009197.3\|UniProtKB=Q67EQ6	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118403281\|UniProtKB=A0A9J7HDV5	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC578201\|UniProtKB=A0A7M7RAQ4	Strongylocentrotus purpuratus	LDO
STRPU\|EnsemblGenome=LOC115924227\|UniProtKB=A0A7M7NXP4	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00010476\|UniProtKB=O17917	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00037758\|UniProtKB=Q67EQ5	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304693\|UniProtKB=A0A8R1V2S3	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0038772\|UniProtKB=Q9VDP8	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP007068\|UniProtKB=Q7QIT7	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC009871\|UniProtKB=D6WQ47	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_112971\|UniProtKB=E9HDM0	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_302909\|UniProtKB=E9HPZ0	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW023200\|UniProtKB=B7QM34	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG185736\|UniProtKB=T1FN79	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g193827\|UniProtKB=A7SUV2	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG20796\|UniProtKB=B3RMM5	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_2116\|UniProtKB=A9UPI2	Monosiga brevicollis	LDO
YEAST\|SGD=S000004315\|UniProtKB=P53769	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFR499C\|UniProtKB=Q752S4	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000187163\|UniProtKB=Q5ACW2	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_C22484g\|UniProtKB=Q6CB23	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_07755\|UniProtKB=Q5AVC5	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_5G07720\|UniProtKB=Q4WUA0	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01954\|UniProtKB=Q7SDY3	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_11427\|UniProtKB=A7F1F7	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_16397\|UniProtKB=Q0TVR5	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC13E7.02\|UniProtKB=Q9P6R8	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_03112\|UniProtKB=B6K3C8	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNI04230\|UniProtKB=P0CQ64	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_05163\|UniProtKB=Q4P400	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_01325\|UniProtKB=E3JVB9	Puccinia graminis	LDO
DICDI\|dictyBase=DDB_G0267870\|UniProtKB=Q55G16	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_80146\|UniProtKB=F0ZPN7	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_200630\|UniProtKB=A2FRZ9	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_185490\|UniProtKB=A2D8J3	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1443800\|UniProtKB=Q8IL33	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00034302001\|UniProtKB=A0C208	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_25179\|UniProtKB=B8LCU0	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GHT1_PHYRM\|UniProtKB=H3GHT1	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_06g254650v5\|UniProtKB=A0A2K3DMB1	Chlamydomonas reinhardtii	LDO
ZOSMR\|Gene_ORFName=ZOSMA_14G00700\|UniProtKB=A0A0K9PWK0	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g18240\|UniProtKB=A0A804K802	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_017753mg\|UniProtKB=K3YU04	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3004G113700\|UniProtKB=C5XZF5	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb204190\|UniProtKB=B4FWN6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os02g0301000\|UniProtKB=Q6K4V3	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g09570v3\|UniProtKB=I1HZA5	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0391280\|UniProtKB=F2DBY5	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G221600\|UniProtKB=A0A3B6ISV0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G222000\|UniProtKB=A0A3B6JMH3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G082400\|UniProtKB=A0A3B6HSX0	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS6B02G296000\|UniProtKB=A0A3B6PQJ0	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_028906\|UniProtKB=A0A1U8Q8A7	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110794777\|UniProtKB=A0A9R0K2J7	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0246971\|UniProtKB=A0A251UG64	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr04g0182251\|UniProtKB=A0A251V0X4	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C700343030\|UniProtKB=A0A9R1V3B4	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a009713mg\|UniProtKB=A0A022QWE9	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_05983\|UniProtKB=A0A2G3A9I4	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400013655\|UniProtKB=M1B2E5	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc02g082110.3\|UniProtKB=A0A3Q7F805	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107820773\|UniProtKB=A0A1S4CMV0	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107829014\|UniProtKB=A0A1S4DEQ9	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi15g00994\|UniProtKB=D7UCN8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_D01238\|UniProtKB=A0A059CFF1	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_L015902\|UniProtKB=A0A058ZSQ0	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A01P41390.1\|UniProtKB=A0A078G815	Brassica napus	O
BRACM\|EnsemblGenome=Bra008536\|UniProtKB=A0A3P6A7H4	Brassica campestris	O
BRACM\|EnsemblGenome=Bra036439\|UniProtKB=M4F5T3	Brassica campestris	O
ARATH\|TAIR=locus=505006423\|UniProtKB=A0A178UZR1	Arabidopsis thaliana	O
BRANA\|Gene_ORFName=DARMORV10_C05P00620.1\|UniProtKB=A0A078FQN8	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra033268\|UniProtKB=M4EWT3	Brassica campestris	LDO
ARATH\|TAIR=locus=2164320\|UniProtKB=Q9FNG6	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2035377\|UniProtKB=Q8GX84	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107910592\|UniProtKB=A0A1U8JUK9	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107893706\|UniProtKB=A0A1U8IEL3	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_031427\|UniProtKB=A0A061F796	Theobroma cacao	O
THECC\|EnsemblGenome=TCM_020255\|UniProtKB=A0A061EKN3	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g020671mg\|UniProtKB=A0A067G2P3	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G097300v3\|UniProtKB=A0A2K1XT33	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_02G115900\|UniProtKB=A0A251LWF8	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0693420\|UniProtKB=B9S849	Ricinus communis	LDO
RICCO\|Gene_ORFName=RCOM_0694470\|UniProtKB=B9S864	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_08G286000\|UniProtKB=I1KXE8	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_03G025400\|UniProtKB=I1JKM9	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_05G210600\|UniProtKB=K7KS04	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_7g108868\|UniProtKB=A0A072U5J1	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_7g109250\|UniProtKB=G7KSR1	Medicago truncatula	LDO
JUGRE\|Gene=LOC108983656\|UniProtKB=A0A6P9EHM2	Juglans regia	O
JUGRE\|EnsemblGenome=Jr01_19000\|UniProtKB=A0A2I4DUT4	Juglans regia	O
JUGRE\|EnsemblGenome=Jr07_08490\|UniProtKB=A0A2I4F8E7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G382870\|UniProtKB=A0A0A0KFS0	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G095500\|UniProtKB=A0A251N9A3	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_6G288300\|UniProtKB=A0A251NX62	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_406998\|UniProtKB=D8R3K9	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_422399\|UniProtKB=D8SI98	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c8_16180\|UniProtKB=A9SSR1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0066s0113\|UniProtKB=A0A2R6WQP1	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_001200240\|UniProtKB=A0A1Y1HVP4	Klebsormidium nitens	LDO