PANTHER Gene Information

Gene Symbol(s):

AMTR_s00078p00056260

Organism:

Amborella trichopoda

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Gene Name:

RNA-dependent RNA polymerase

Gene ID:

AMTR_s00078p00056260

Protein ID:

W1P753

Persistent Id:

PTN004603884

Alternate Ids:

ERN03748(EMBL-CDS)	W1P753(Synonym)
AMTR_s00078p00056260(Ensembl)	KI394330(EMBL)
XP_006842073(refSeq)	586686966(GI)
18431896(GeneID)	W1P753_AMBTC(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	RNA-DEPENDENT RNA POLYMERASE (PTHR23079)
PANTHER Subfamily:	RNA-DEPENDENT RNA POLYMERASE 6 (PTHR23079:SF18)
PANTHER GO-slim Molecular Function:	5'-3' RNA polymerase activity
PANTHER GO-slim Biological Process:	siRNA processing
PANTHER GO-slim Cellular Component:	nuclear protein-containing complex RNA polymerase complex
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	5'-3' RNA polymerase activity, RNA binding, RNA-dependent RNA polymerase activity
GO BP Complete:	RNA-templated transcription, regulatory ncRNA-mediated gene silencing, siRNA processing
GO CC Complete:	nuclear RNA-directed RNA polymerase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BRAFL\|Gene=LOC118427356\|UniProtKB=A0A9J7M486	Branchiostoma floridae	O
BRAFL\|Gene=LOC118420943\|UniProtKB=A0A9J7MXQ8	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428502\|UniProtKB=A0A9J7M4A9	Branchiostoma floridae	O
BRAFL\|Gene=LOC118429714\|UniProtKB=A0A9J7M7H1	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428503\|UniProtKB=A0A9J7M4B0	Branchiostoma floridae	O
CAEEL\|WormBase=WBGene00004510\|UniProtKB=G5EE53	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00730\|UniProtKB=A8WN72	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00304839\|UniProtKB=A0A8R1V5S9	Pristionchus pacificus	O
CAEEL\|WormBase=WBGene00004509\|UniProtKB=G5EFA8	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00004508\|UniProtKB=G5ECM1	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG19448\|UniProtKB=A8XVP2	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00001214\|UniProtKB=G5EBQ3	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00321\|UniProtKB=A8WMP9	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00098113\|UniProtKB=A0A2A6BLL4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00274061\|UniProtKB=A0A2A6BLU4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00283817\|UniProtKB=A0A2A6CUJ9	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00271994\|UniProtKB=A0A2A6BNW3	Pristionchus pacificus	O
IXOSC\|EnsemblGenome=ISCW001005\|UniProtKB=B7P6P3	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008905\|UniProtKB=B7Q238	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008904\|UniProtKB=B7Q237	Ixodes scapularis	O
ASPFU\|EnsemblGenome=AFUA_5G09430\|UniProtKB=Q4WUR8	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07534\|UniProtKB=Q1K6C4	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_03377\|UniProtKB=A7EDI7	Sclerotinia sclerotiorum	O
EMENI\|EnsemblGenome=ANIA_02717\|UniProtKB=Q5B9R3	Emericella nidulans	O
NEUCR\|EnsemblGenome=NCU08435\|UniProtKB=Q1K8P0	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_09915\|UniProtKB=A7EX56	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_15784\|UniProtKB=Q0TXM0	Phaeosphaeria nodorum	O
EMENI\|EnsemblGenome=ANIA_04790\|UniProtKB=C8VAM8	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G06790\|UniProtKB=Q4WWR4	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU02178\|UniProtKB=Q1K907	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_13161\|UniProtKB=A7F6D2	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_01986\|UniProtKB=Q0V1X8	Phaeosphaeria nodorum	O
PHANO\|EnsemblGenome=SNOG_14810\|UniProtKB=Q0TZW2	Phaeosphaeria nodorum	O
PHANO\|Gene_ORFName=SNOG_00237\|UniProtKB=Q0V6X7	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC6F12.09\|UniProtKB=O14227	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_03356\|UniProtKB=B6K409	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNG01230\|UniProtKB=Q5KEA1	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_17766\|UniProtKB=E3L5E1	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_20838\|UniProtKB=H6QPF7	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_02834\|UniProtKB=E3JWG8	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_05092\|UniProtKB=E3K6D6	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_09533\|UniProtKB=E3KHP5	Puccinia graminis	O
ENTH1\|EnsemblGenome=CL6EHI_139420\|UniProtKB=C4M6W7	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0280963\|UniProtKB=Q54UI6	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_149105\|UniProtKB=F0ZCV1	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0289659\|UniProtKB=Q54H25	Dictyostelium discoideum	O
DICDI\|dictyBase=DDB_G0291249\|UniProtKB=Q54EH7	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_54684\|UniProtKB=F0ZI81	Dictyostelium purpureum	O
GIAIC\|EnsemblGenome=GL50803_102515\|UniProtKB=E2RTV4	Giardia intestinalis	O
PARTE\|EnsemblGenome=GSPATT00018564001\|UniProtKB=A0DMU3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00006401001\|UniProtKB=Q3SE69	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024768001\|UniProtKB=Q3SE67	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00036857001\|UniProtKB=A0CBA7	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_22277\|UniProtKB=B8BZF0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_5028\|UniProtKB=B8C1R8	Thalassiosira pseudonana	O
ZOSMR\|Gene_ORFName=ZOSMA_29G01090\|UniProtKB=A0A0K9PBJ8	Zostera marina	O
SETIT\|EnsemblGenome=SETIT_015317mg\|UniProtKB=K3YM39	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3010G213000\|UniProtKB=C5Z764	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3010G213100\|UniProtKB=A0A1W0VU58	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb389110\|UniProtKB=K7VBP9	Zea mays	O
SETIT\|EnsemblGenome=SETIT_015045mg\|UniProtKB=K3YLC2	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3007G076600\|UniProtKB=C5YIV2	Sorghum bicolor	O
SETIT\|EnsemblGenome=SETIT_000086mg\|UniProtKB=K3XDW9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G177000\|UniProtKB=C5XM68	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb132680\|UniProtKB=A0A0K1H3C3	Zea mays	O
ORYSJ\|EnsemblGenome=Os01g0527600\|UniProtKB=Q8LHH9	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g55350v3\|UniProtKB=I1H321	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_2g46870v3\|UniProtKB=A0A0Q3KE33	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0320600\|UniProtKB=A0A8I6X9C0	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3B02G543300\|UniProtKB=A0A3B6FXK1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G489400\|UniProtKB=A0A3B6H1N9	Triticum aestivum	O
NELNU\|Gene=LOC104592435\|UniProtKB=A0A1U7Z9H7	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_028630\|UniProtKB=A0A1U7ZR14	Nelumbo nucifera	O
SPIOL\|Gene=LOC110786770\|UniProtKB=A0A9R0IDI8	Spinacia oleracea	O
HELAN\|Gene_ORFName=HannXRQ_Chr06g0181231\|UniProtKB=A0A251UJ28	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0267731\|UniProtKB=A0A251VBM5	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0045351\|UniProtKB=A0A251VTX1	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr06g0270421\|UniProtKB=A0A9K3NK86	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100017760\|UniProtKB=A0A9R1WMC3	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a000386mg\|UniProtKB=A0A022PXL1	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_34066\|UniProtKB=A0A2G2XX56	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_33644\|UniProtKB=A0A1U8GLH5	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400030858\|UniProtKB=M1D1J8	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc08g075820.3\|UniProtKB=A0A3Q7HQT3	Solanum lycopersicum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400030859\|UniProtKB=M1D1J9	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc08g075825.1\|UniProtKB=A0A3Q7IMC2	Solanum lycopersicum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400023601\|UniProtKB=M1C692	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc04g014870.3\|UniProtKB=A0A3Q7FZY7	Solanum lycopersicum	O
TOBAC\|Gene=LOC107798716\|UniProtKB=A0A1S4AKQ9	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi04g00477\|UniProtKB=F6H323	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_C02782\|UniProtKB=A0A059CTZ5	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_C02779\|UniProtKB=A0A059CSP6	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_C02780\|UniProtKB=A0A059CSG6	Eucalyptus grandis	O
BRACM\|EnsemblGenome=Bra029957\|UniProtKB=M4EMD7	Brassica campestris	O
ARATH\|TAIR=locus=2114633\|UniProtKB=Q9SG02	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107906882\|UniProtKB=A0A1U8JGU2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107958956\|UniProtKB=A0A1U8PGM2	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_037008\|UniProtKB=A0A061GHY4	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g048783mg\|UniProtKB=A0A067EC92	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g041430mg\|UniProtKB=A0A067FEX2	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_018G028100v3\|UniProtKB=B9IKW9	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_006G253500v3\|UniProtKB=B9HA49	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_16G121400\|UniProtKB=A0A2C9UB98	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0924060\|UniProtKB=B9RP51	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_04G067300\|UniProtKB=K7KIJ3	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_06G068900\|UniProtKB=A0A0R0JN45	Glycine max	O
MEDTR\|EnsemblGenome=MTR_3g107390\|UniProtKB=G7JB32	Medicago truncatula	O
JUGRE\|Gene=LOC109011160\|UniProtKB=A0A6P9EBY0	Juglans regia	O
JUGRE\|EnsemblGenome=Jr11_29310\|UniProtKB=A0A2I4ES67	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_2G381730\|UniProtKB=E9NWL0	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_1G480300\|UniProtKB=M5XL37	Prunus persica	O
PHYPA\|EnsemblGenome=Pp3c19_17100\|UniProtKB=A0MD71	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0151s0009\|UniProtKB=A0A2R6W543	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000630360\|UniProtKB=A0A1Y1HQC0	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002820020\|UniProtKB=A0A1Y1IC39	Klebsormidium nitens	O