PANTHER Gene Information

Gene Symbol(s):

NRPD1

Organism:

Arabidopsis thaliana

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Gene Name:

DNA-directed RNA polymerase IV subunit 1

Gene ID:

2015163

Protein ID:

Q9LQ02

Persistent Id:

PTN000453521

Alternate Ids:

59939208(GI)	AtNRPD1a(Synonym)
AAY89363(EMBL-CDS)	AT1G63020(Ensembl)
DQ020657(EMBL)	842605(GeneID)
NRPD1_ARATH(UniProtKB-ID)	NM_001198369(refSeq)
AT1G63020(Ensembl_TRS)	NRPD1(Symbol)
locus:2015163(TAIR)	AT1G63020(Ensembl_PRO)
2.7.7.6(EC)
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PANTHER Classification

PANTHER Family:	DNA-DIRECTED RNA POLYMERASE (PTHR19376)
PANTHER Subfamily:	DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 (PTHR19376:SF36)
PANTHER GO-slim Molecular Function:	DNA-directed 5'-3' RNA polymerase activity
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	DNA-directed RNA polymerase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, DNA-directed 5'-3' RNA polymerase activity, protein binding
GO BP Complete:	siRNA-mediated long-distance post-transcriptional gene silencing, DNA-templated transcription, regulatory ncRNA-mediated gene silencing, siRNA processing
GO CC Complete:	nucleus, RNA polymerase IV complex, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=30074\|UniProtKB=O14802	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000002664.4\|UniProtKB=K7D6W6	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000027729.2\|UniProtKB=G3S495	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000005514.4\|UniProtKB=G7N235	Macaca mulatta	O
MOUSE\|MGI=MGI=2681836\|UniProtKB=B2RXC6	Mus musculus	O
RAT\|RGD=1305574\|UniProtKB=E9PTB6	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000013259\|UniProtKB=A4IF62	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000010327.5\|UniProtKB=F1S2E6	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000019416.4\|UniProtKB=A0A5F5PMN3	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000000843.6\|UniProtKB=M3VVI8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845013802.1\|UniProtKB=A0A8I3NNT0	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000001036.4\|UniProtKB=F6ZEZ4	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000007013.4\|UniProtKB=F7GB83	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010020737.1\|UniProtKB=A0A8V0Z8N2	Gallus gallus	O
CHICK\|Gene_ORFName=RCJMB04_7b9\|UniProtKB=Q5ZL98	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000007985.4\|UniProtKB=A0A803STM3	Anolis carolinensis	O
XENTR\|Xenbase=XB-GENE-1012749\|UniProtKB=F7AYG7	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000008958.2\|UniProtKB=A0A3B3HL58	Oryzias latipes	O
DANRE\|Gene=polr3a\|UniProtKB=A0A8M9PWI3	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000004942.1\|UniProtKB=W5MC50	lepisosteus oculatus	O
BRAFL\|Gene=LOC118405562\|UniProtKB=A0A9J7HKA8	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC576264\|UniProtKB=A0A7M7NEA0	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004411\|UniProtKB=Q18566	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG05787\|UniProtKB=A8X1M6	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00111260\|UniProtKB=A0A8R1UE11	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0030687\|UniProtKB=A8JUY3	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP004703\|UniProtKB=Q7PMU6	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC010518\|UniProtKB=D6WDY7	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_209553\|UniProtKB=E9G7E0	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_45101\|UniProtKB=E9G2J2	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_62003\|UniProtKB=E9HF69	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_67470\|UniProtKB=E9HZ17	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_222950\|UniProtKB=E9G790	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW008476\|UniProtKB=B7PVV6	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG106408\|UniProtKB=T1EE25	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g190300\|UniProtKB=A7SJ34	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_39165\|UniProtKB=A9VCM2	Monosiga brevicollis	O
YEAST\|SGD=S000005642\|UniProtKB=P04051	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER252C\|UniProtKB=Q756K2	Eremothecium gossypii	O
CANAL\|CGD=CAL0000190107\|UniProtKB=A0A1D8PMS1	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_C22550g\|UniProtKB=Q6CB20	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_10316\|UniProtKB=C8VPJ2	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_3G14370\|UniProtKB=Q4WYV2	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU03986\|UniProtKB=Q7RXJ6	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_10539\|UniProtKB=A7EYX3	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_01497\|UniProtKB=Q0V3B7	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPBC651.08c\|UniProtKB=O94666	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_04934\|UniProtKB=B6K857	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNF00390\|UniProtKB=Q5KFV9	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_06156\|UniProtKB=A0A0D1DT74	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_01084\|UniProtKB=E3JUM8	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_14837\|UniProtKB=F4PE56	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_125350\|UniProtKB=C4M626	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0277199\|UniProtKB=Q86AQ5	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_147786\|UniProtKB=F0Z9E5	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_34_0360\|UniProtKB=Q4Q3H2	Leishmania major	O
TRYB2\|Gene_ORFName=Tb10.70.4870\|UniProtKB=Q38BW7	Trypanosoma brucei	O
GIAIC\|EnsemblGenome=GL50803_16223\|UniProtKB=A8B4F1	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_172240\|UniProtKB=A2DEX5	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1329000\|UniProtKB=Q8IE49	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00034096001\|UniProtKB=A0C1F3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00038858001\|UniProtKB=A0CQY5	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_28816\|UniProtKB=B8C4M1	Thalassiosira pseudonana	O
PHYRM\|Gene=H3G8F7_PHYRM\|UniProtKB=H3G8F7	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_03g165750v5\|UniProtKB=A0A2K3DWQ1	Chlamydomonas reinhardtii	O
ZOSMR\|Gene_ORFName=ZOSMA_1G02080\|UniProtKB=A0A0K9PPT9	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g11740\|UniProtKB=A0A804K5L3	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_0000652mg\|UniProtKB=A0A0Q3PPN4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G185200\|UniProtKB=A0A1Z5REK7	Sorghum bicolor	LDO
BRADI\|EnsemblGenome=BRADI_2g34876v3\|UniProtKB=A0A0Q3GA61	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCS1A02G106300\|UniProtKB=A0A3B5XW61	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G123600\|UniProtKB=A0A3B5YUZ7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G108700\|UniProtKB=A0A3B5ZS38	Triticum aestivum	LDO
NELNU\|Gene=LOC104612685\|UniProtKB=A0A1U8QAR8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110784341\|UniProtKB=A0A9R0I8K2	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0239971\|UniProtKB=A0A251UFM9	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C300103650\|UniProtKB=A0A9R1XTE7	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000239mg\|UniProtKB=A0A022RG79	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_00391\|UniProtKB=A0A2G3AE39	Capsicum annuum	O
CAPAN\|EnsemblGenome=T459_00389\|UniProtKB=A0A1U8G9I3	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc08g080220.2\|UniProtKB=A0A3Q7HVN8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107794854\|UniProtKB=A0A1S4A8H2	Nicotiana tabacum	O
TOBAC\|Gene=LOC107766126\|UniProtKB=A0A1S3XK43	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_02s0025g04530\|UniProtKB=F6HUI3	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_D01929\|UniProtKB=A0A059CGN4	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A03P68370.1\|UniProtKB=A0A078H322	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A09P13380.1\|UniProtKB=A0A078IGR2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra027611\|UniProtKB=M4EFP9	Brassica campestris	LDO
GOSHI\|Gene=LOC107904496\|UniProtKB=A0A1U8J7Q9	Gossypium hirsutum	O
GOSHI\|Gene=LOC107926978\|UniProtKB=A0A1U8LFL4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107930048\|UniProtKB=A0A1U8LUJ3	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_016168\|UniProtKB=A0A061G5Z9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0005253mg\|UniProtKB=A0A067FK42	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_001G111300v3\|UniProtKB=A0A2K2BVT7	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_02G028200\|UniProtKB=A0A251LE42	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1683300\|UniProtKB=B9RC12	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_01G215700\|UniProtKB=I1JA29	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_11G026700\|UniProtKB=K7LMQ8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g011000\|UniProtKB=G7KER5	Medicago truncatula	LDO
JUGRE\|Gene=LOC108990858\|UniProtKB=A0A2I4EM78	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G039340\|UniProtKB=A0A0A0L2L4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G089300\|UniProtKB=A0A251P5P8	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_441655\|UniProtKB=D8RLP4	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_413061\|UniProtKB=D8RN79	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c17_3180\|UniProtKB=A0A7I4B9Y6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c15_4150\|UniProtKB=A0A2K1JBT9	Physcomitrella patens	LDO
PHYPA\|EnsemblGenome=Pp3c15_5270\|UniProtKB=A0A0C4K0P8	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0006s0043\|UniProtKB=A0A2R6XPI9	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0104s0044\|UniProtKB=A0A2R6WDU2	Marchantia polymorpha	LDO
MARPO\|EnsemblGenome=MARPO_0004s0120\|UniProtKB=A0A2R6XRV7	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_005460080\|UniProtKB=A0A1Y1INF5	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_002430080\|UniProtKB=A0A1Y1I6L5	Klebsormidium nitens	O
NITMS\|EnsemblGenome=Nmar_0348\|UniProtKB=A9A460	Nitrosopumilus maritimus	O
KORCO\|EnsemblGenome=Kcr_1522\|UniProtKB=B1L739	Korarchaeum cryptofilum	O
SACS2\|EnsemblGenome=SSO0225\|UniProtKB=Q980R2	Sulfolobus solfataricus	O
PYRAE\|EnsemblGenome=PAE0666\|UniProtKB=Q8ZYQ8	Pyrobaculum aerophilum	O
METAC\|EnsemblGenome=MA_1263\|UniProtKB=Q8TRB7	Methanosarcina acetivorans	O
METJA\|EnsemblGenome=MJ_1042\|UniProtKB=Q58445	Methanocaldococcus jannaschii	O
HALSA\|EnsemblGenome=VNG_2664G\|UniProtKB=P0CX02	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK1082\|UniProtKB=Q5JE33	Thermococcus kodakaraensis	O
CHLAA\|EnsemblGenome=Caur_0873\|UniProtKB=A9WH11	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4655\|UniProtKB=Q8CJT1	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv0668\|UniProtKB=P9WGY7	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_340\|UniProtKB=P47582	mycoplasma genitalium	O
STRR6\|EnsemblGenome=spr1776\|UniProtKB=Q8DNF1	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_00525\|UniProtKB=Q2G0N5	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00786\|UniProtKB=Q8YA96	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01080\|UniProtKB=P37871	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0123\|UniProtKB=Q81J47	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_0459\|UniProtKB=P36252	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_0911\|UniProtKB=Q9RVW0	Deinococcus radiodurans	O
LEPIN\|EnsemblGenome=LA_3419\|UniProtKB=Q8F0S3	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_2733\|UniProtKB=Q8A470	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_314\|UniProtKB=O84316	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB5416\|UniProtKB=Q7URW4	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_1945\|UniProtKB=O67763	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1346\|UniProtKB=B5YFV7	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_0975\|UniProtKB=B8E1C7	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN2035\|UniProtKB=Q8RHI7	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_1198\|UniProtKB=O25806	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB0133\|UniProtKB=Q9K1J1	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2862\|UniProtKB=I7EPD8	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC50674\|UniProtKB=Q89J75	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0232\|UniProtKB=Q83ET0	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0514\|UniProtKB=P43739	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_0225\|UniProtKB=Q8EK73	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0329\|UniProtKB=Q9KV29	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0889\|UniProtKB=Q8PC55	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA4269\|UniProtKB=Q9HWC9	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM4154\|UniProtKB=P0A2R4	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_3109\|UniProtKB=Q8D1H3	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77332\|UniProtKB=P0A8T7	Escherichia coli	O