PANTHER Gene Information

Gene Symbol(s):

LRS1

Organism:

Arabidopsis thaliana

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Gene Name:

AT3g05090_T12H1_5

Gene ID:

2096254

Protein ID:

Q93ZS6

Persistent Id:

PTN000458533

Alternate Ids:

AAL07141(EMBL-CDS)	18397118(GI)
819671(GeneID)	NM_180185(refSeq)
Q93ZS6(Synonym)	locus:2096254(TAIR)
Q93ZS6_ARATH(UniProtKB-ID)	BT000631(EMBL)
AT3G05090(Ensembl)
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PANTHER Classification

PANTHER Family:	WD REPEAT-CONTAINING PROTEIN 48 (PTHR19862)
PANTHER Subfamily:	WD REPEAT-CONTAINING PROTEIN 48 (PTHR19862:SF14)
PANTHER GO-slim Molecular Function:	ubiquitin binding
PANTHER GO-slim Biological Process:	double-strand break repair via homologous recombination
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	ubiquitin binding
GO BP Complete:	double-strand break repair via homologous recombination, lateral root formation
GO CC Complete:	nucleus, cytosol, Cul4-RING E3 ubiquitin ligase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=30914\|UniProtKB=Q8TAF3	Homo sapiens	LDO
MOUSE\|MGI=MGI=1914811\|UniProtKB=Q8BH57	Mus musculus	LDO
RAT\|RGD=1309702\|UniProtKB=A0A8I6AA52	Rattus norvegicus	LDO
BOVIN\|Gene=WDR48\|UniProtKB=Q32PG3	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000003745.6\|UniProtKB=F1MV75	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000011261.5\|UniProtKB=A0A5G2R3A9	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000018492.4\|UniProtKB=A0A9L0SGB7	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000025123.4\|UniProtKB=M3X587	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845030481.1\|UniProtKB=A0A8I3S7M5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000013437.4\|UniProtKB=A0A5F8HFM9	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000009844.3\|UniProtKB=F7AKD8	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010026715\|UniProtKB=Q5F3K4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000009416.4\|UniProtKB=A0A803SMK1	Anolis carolinensis	LDO
XENLA\|Gene=wdr48.S\|UniProtKB=A0A8J1L2R6	Xenopus laevis	O
XENLA\|Gene=wdr48.L\|UniProtKB=A0A8J1KWN8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-976371\|UniProtKB=Q05B17	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011723.2\|UniProtKB=H2M882	Oryzias latipes	LDO
DANRE\|Gene=wdr48b\|UniProtKB=A0A8M2BFQ8	Danio rerio	LDO
DANRE\|ZFIN=ZDB-GENE-030131-6622\|UniProtKB=Q6PFM9	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000009906.1\|UniProtKB=W5MUP8	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000004300.3\|UniProtKB=F6TSV6	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118404033\|UniProtKB=A0A9J7KHG7	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC583324\|UniProtKB=A0A7M7RHA4	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00009441\|UniProtKB=Q20059	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG18038\|UniProtKB=A8XSW2	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304874\|UniProtKB=A0A8R1V7S4	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0033607\|UniProtKB=Q1LZ08	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP001361\|UniProtKB=Q7PXD9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC008107\|UniProtKB=D1ZZU2	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_195062\|UniProtKB=E9GAM8	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW004023\|UniProtKB=B7PIF1	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG184854\|UniProtKB=T1FM32	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g185249\|UniProtKB=A7S3I9	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG22317\|UniProtKB=B3RSV8	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_29733\|UniProtKB=A9VBZ0	Monosiga brevicollis	LDO
YEAST\|SGD=S000005447\|UniProtKB=Q99247	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER035W\|UniProtKB=Q757H8	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000198790\|UniProtKB=A0A1D8PFH9	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_D06435g\|UniProtKB=Q6CA27	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_10017\|UniProtKB=C8VQL1	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_5G11870\|UniProtKB=Q4WVF0	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01569\|UniProtKB=Q1K4X0	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_09584\|UniProtKB=A7EW75	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_06829\|UniProtKB=Q0UN35	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC31A2.14\|UniProtKB=Q09731	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00805\|UniProtKB=B6JWM7	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNN00190\|UniProtKB=Q5K7D9	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_05845\|UniProtKB=A0A0D1DU53	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_15666\|UniProtKB=E3KYZ2	Puccinia graminis	LDO
DICDI\|dictyBase=DDB_G0277533\|UniProtKB=Q54ZP5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_54966\|UniProtKB=F0ZJQ8	Dictyostelium purpureum	LDO
CHLRE\|EnsemblGenome=CHLRE_04g227500v5\|UniProtKB=A0A2K3DUQ2	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_04g229550v5\|UniProtKB=A0A2K3DUX9	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_06g309800v5\|UniProtKB=A0A2K3DRK4	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_06g309650v5\|UniProtKB=A0A2K3DRR2	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_06g265652v5\|UniProtKB=A0A2K3DMZ0	Chlamydomonas reinhardtii	LDO
CHLRE\|EnsemblGenome=CHLRE_01g001300v5\|UniProtKB=A0A2K3E4T5	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_15g641150v5\|UniProtKB=A0A2K3CWU4	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_17g728450v5\|UniProtKB=A0A2K3CQT5	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_16g654950v5\|UniProtKB=A0A2K3CT62	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_13g591300v5\|UniProtKB=A0A2K3D140	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_04g227251v5\|UniProtKB=A0A2K3DUR0	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_02g099055v5\|UniProtKB=A0A2K3E280	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_12g552700v5\|UniProtKB=A0A2K3D618	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_04g219150v5\|UniProtKB=A0A2K3DU39	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_14g633300v5\|UniProtKB=A0A2K3CYW3	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_04g222650v5\|UniProtKB=A0A2K3DUC8	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_02g118700v5\|UniProtKB=A0A2K3E3G9	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_10g421900v5\|UniProtKB=A0A2K3D993	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00030p00083820\|UniProtKB=U5D0U4	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_15G01160\|UniProtKB=A0A0K9PX04	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g30330\|UniProtKB=A0A804IVP0	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma09_g25080\|UniProtKB=A0A804KNG2	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_009446mg\|UniProtKB=K3Y5F8	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3008G047800\|UniProtKB=A0A1B6PBH4	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb407650\|UniProtKB=K7TIX2	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb139400\|UniProtKB=A0A1D6MZK8	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os12g0165000\|UniProtKB=Q2QX93	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g41777v3\|UniProtKB=A0A2K2CTN8	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0457370\|UniProtKB=A0A8I6XVT7	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS5D02G131000\|UniProtKB=A0A3B6MMC6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G122700\|UniProtKB=A0A3B6LJ97	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G122900\|UniProtKB=A0A3B6KG26	Triticum aestivum	LDO
NELNU\|Gene=LOC104585918\|UniProtKB=A0A1U7YN08	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_008584\|UniProtKB=A0A1U7Z091	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110801074\|UniProtKB=A0A9R0J8Y0	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HannXRQ_Chr12g0366721\|UniProtKB=A0A251T156	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr12g0538691\|UniProtKB=A0A9K3HG43	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr16g0722791\|UniProtKB=A0A9K3DMP5	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800400810\|UniProtKB=A0A9R1WXX7	Lactuca sativa	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0622581\|UniProtKB=A0A251SDP2	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C200053260\|UniProtKB=A0A9R1WCJ7	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C900473720\|UniProtKB=A0A9R1UIM1	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a001759mg\|UniProtKB=A0A022RGJ8	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc01g098090.3\|UniProtKB=A0A3Q7ENU8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107831097\|UniProtKB=A0A1S4DLL9	Nicotiana tabacum	O
TOBAC\|Gene=LOC107776162\|UniProtKB=A0A1S3YH01	Nicotiana tabacum	O
TOBAC\|Gene=LOC107799253\|UniProtKB=A0A1S4AMF8	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi14g00389\|UniProtKB=F6HTW0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H04403\|UniProtKB=A0A059B7M5	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00071581001\|UniProtKB=A0A078HSJ2	Brassica napus	O
BRACM\|EnsemblGenome=Bra001136\|UniProtKB=M4CAA7	Brassica campestris	O
BRANA\|Gene_ORFName=DARMORV10_C05P62150.1\|UniProtKB=A0A078HVR7	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A05P42490.1\|UniProtKB=A0A078GRG2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra039464\|UniProtKB=M4FEE3	Brassica campestris	LDO
GOSHI\|Gene=LOC107888639\|UniProtKB=A0A1U8HQJ5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107893215\|UniProtKB=A0A1U8IBH4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107933861\|UniProtKB=A0A1U8M4C5	Gossypium hirsutum	O
GOSHI\|Gene=LOC107899144\|UniProtKB=A0A1U8IQ48	Gossypium hirsutum	O
GOSHI\|Gene=LOC107893602\|UniProtKB=A0A1U8ICU6	Gossypium hirsutum	O
GOSHI\|Gene=LOC107894674\|UniProtKB=A0A1U8IBD0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107920261\|UniProtKB=A0A1U8KSC8	Gossypium hirsutum	O
GOSHI\|Gene=LOC107920282\|UniProtKB=A0A1U8KSF5	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_026436\|UniProtKB=A0A061F3F9	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g046871mg\|UniProtKB=A0A067EE36	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_013G033800\|UniProtKB=A0A3N7FVF5	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_005G046500v3\|UniProtKB=B9MZJ8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_08G126500\|UniProtKB=A0A2C9VFT8	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_09G158100\|UniProtKB=A0A251K7Z2	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1429050\|UniProtKB=B9REV1	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_03G244500\|UniProtKB=K7KGU2	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G241800\|UniProtKB=K7N026	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G241300\|UniProtKB=I1NC55	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G159000\|UniProtKB=K7LJP4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_03G243800\|UniProtKB=A0A0R0KPA1	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g081830\|UniProtKB=A0A072VMJ6	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_7g114370\|UniProtKB=G7L0S0	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr11_01400\|UniProtKB=A0A6P9EW71	Juglans regia	O
JUGRE\|EnsemblGenome=Jr08_22300\|UniProtKB=A0A2I4G3Z3	Juglans regia	O
JUGRE\|EnsemblGenome=Jr08_22290\|UniProtKB=A0A6P9EZN4	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_2G012680\|UniProtKB=A0A0A0LJF0	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G336900\|UniProtKB=M5W3P5	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_139346\|UniProtKB=D8QPW0	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_180574\|UniProtKB=D8SKL4	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c14_23300\|UniProtKB=A0A2K1JIZ5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c1_36050\|UniProtKB=A0A2K1LB42	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c2_9310\|UniProtKB=A0A2K1L0T4	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0016s0038\|UniProtKB=A0A2R6XFT6	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003680110\|UniProtKB=A0A1Y1IF03	Klebsormidium nitens	LDO