PANTHER Gene Information

Gene Symbol(s):

At5g28460

Organism:

Arabidopsis thaliana

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Gene Name:

Pentatricopeptide repeat-containing protein At5g28460

Gene ID:

2146554

Protein ID:

Q9LKU8

Persistent Id:

PTN000612324

Alternate Ids:

Q8LFD9(AltAccession)	AF262038(EMBL)
NP_680234(refSeq)	PP401_ARATH(UniProtKB-ID)
AT5G28460(Ensembl)	9502149(GI)
PP401(Synonym)	AED93801(EMBL-CDS)
locus:2146554(TAIR)	AT5G28460(Ensembl_TRS)
832933(GeneID)	AT5G28460(Ensembl_PRO)
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PANTHER Classification

PANTHER Family:	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED (PTHR47942)
PANTHER Subfamily:	F21B23.6 PROTEIN (PTHR47942:SF64)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	mRNA binding
GO BP Complete:	mRNA processing
GO CC Complete:	cytoplasm, mitochondrion

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
YEAST\|SGD=S000005926\|UniProtKB=Q12089	Saccharomyces cerevisiae	O
ASPFU\|EnsemblGenome=AFUA_2G10790\|UniProtKB=Q4X191	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07871\|UniProtKB=Q7SBT8	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_08777\|UniProtKB=A7ETX0	Sclerotinia sclerotiorum	O
BATDJ\|Gene_ORFName=BATDEDRAFT_86293\|UniProtKB=F4NWH8	Batrachochytrium dendrobatidis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_87151\|UniProtKB=F4NYP3	Batrachochytrium dendrobatidis	O
EREGS\|EnsemblGenome=AGOS_AFR480C\|UniProtKB=Q752U3	Eremothecium gossypii	O
YARLI\|EnsemblGenome=YALI0_F27753g\|UniProtKB=Q6C051	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_05927\|UniProtKB=Q5B0K3	Emericella nidulans	O
NEUCR\|EnsemblGenome=NCU02674\|UniProtKB=Q7SH55	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_11613\|UniProtKB=A7F1Z2	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_04344\|UniProtKB=Q0UV70	Phaeosphaeria nodorum	O
CRYNJ\|EnsemblGenome=CNB05560\|UniProtKB=Q5KLE5	Cryptococcus neoformans	O
PUCGT\|EnsemblGenome=PGTG_12186\|UniProtKB=E3KPJ5	Puccinia graminis	O
LEIMA\|EnsemblGenome=LMJF_32_1210\|UniProtKB=Q4Q5G1	Leishmania major	O
TRYB2\|Gene_ORFName=Tb11.01.6040\|UniProtKB=Q381Z3	Trypanosoma brucei	O
TRYB2\|Gene_ORFName=Tb10.6k15.0120\|UniProtKB=Q389W1	Trypanosoma brucei	O
PARTE\|EnsemblGenome=GSPATT00012925001\|UniProtKB=A0D323	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_bd1788\|UniProtKB=B8LE47	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_23650\|UniProtKB=B8C6A4	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_23887\|UniProtKB=B8C7L1	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_21886\|UniProtKB=B8BYK0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24893\|UniProtKB=B8CCM8	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24505\|UniProtKB=B8CAF4	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_24332\|UniProtKB=B8LBX6	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GW70_PHYRM\|UniProtKB=H3GW70	Phytophthora ramorum	O
PHYRM\|Gene=H3GRA3_PHYRM\|UniProtKB=H3GRA3	Phytophthora ramorum	O
PHYRM\|Gene=H3H407_PHYRM\|UniProtKB=H3H407	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_12g554528v5\|UniProtKB=A0A2K3D746	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_01g050500v5\|UniProtKB=A0A2K3E800	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_16g649800v5\|UniProtKB=A0A2K3CSU9	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00053p00089490\|UniProtKB=W1P568	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_71G00450\|UniProtKB=A0A0K9NQC6	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_71G00490\|UniProtKB=A0A0K9NSK3	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_71G00430\|UniProtKB=A0A0K9NQA2	Zostera marina	LDO
ZOSMR\|Gene_ORFName=ZOSMA_350G00140\|UniProtKB=A0A0K9P8Z6	Zostera marina	O
SETIT\|EnsemblGenome=SETIT_008679mg\|UniProtKB=K3Y394	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3010G102600\|UniProtKB=A0A194YIB3	Sorghum bicolor	LDO
ORYSJ\|EnsemblGenome=Os06g0249500\|UniProtKB=A0A0P0WUY2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g44340v3\|UniProtKB=I1GZA5	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0669060\|UniProtKB=A0A8I6YTS1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G202800\|UniProtKB=A0A3B6TGZ9	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS7A02G199800\|UniProtKB=A0A3B6RC69	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G106500\|UniProtKB=A0A3B6SGV0	Triticum aestivum	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr04g0182861\|UniProtKB=A0A251V116	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002389mg\|UniProtKB=A0A022QXU3	Erythranthe guttata	LDO
TOBAC\|Gene=LOC107810060\|UniProtKB=A0A1S4BN10	Nicotiana tabacum	O
TOBAC\|Gene=LOC107807319\|UniProtKB=A0A1S4BE38	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi15g01649\|UniProtKB=D7UCE3	Vitis vinifera	LDO
BRACM\|EnsemblGenome=Bra003452\|UniProtKB=M4CGW9	Brassica campestris	LDO
GOSHI\|Gene=LOC107943314\|UniProtKB=A0A1U8N402	Gossypium hirsutum	O
GOSHI\|Gene=LOC107923823\|UniProtKB=A0A1U8L4A0	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_005260\|UniProtKB=A0A061DUV4	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g048807mg\|UniProtKB=A0A067H5Y0	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G090400v3\|UniProtKB=A0A2K1XSQ8	Populus trichocarpa	LDO
SOYBN\|EnsemblGenome=GLYMA_16G031800\|UniProtKB=A0A0R0FX59	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g088810\|UniProtKB=A0A072V063	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_8g098755\|UniProtKB=A0A072TW45	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_7G336570\|UniProtKB=A0A0A0K547	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G177500\|UniProtKB=A0A251QHQ9	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_169661\|UniProtKB=D8RAK7	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c2_27580\|UniProtKB=A0A2K1L376	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0003s0152\|UniProtKB=A0A2R6XT21	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000050390\|UniProtKB=A0A1Y1HJZ4	Klebsormidium nitens	O