PANTHER Gene Information

Gene Symbol(s):

RPS13

Organism:

Arabidopsis thaliana

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Gene Name:

Small ribosomal subunit protein uS13m

Gene ID:

2203216

Protein ID:

Q9CA19

Persistent Id:

PTN002247891

Alternate Ids:

32363391(GI)	AC012193(EMBL)
RT13_ARATH(UniProtKB-ID)	NM_106424(refSeq)
locus:2203216(TAIR)	mS13(Synonym)
AT1G77750(Ensembl_TRS)	RPS13(Symbol)
AT1G77750(Ensembl_PRO)	AT1G77750(Ensembl)
AEE36017(EMBL-CDS)	844111(GeneID)
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PANTHER Classification

PANTHER Family:	30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 (PTHR10871)
PANTHER Subfamily:	SMALL RIBOSOMAL SUBUNIT PROTEIN US13M (PTHR10871:SF28)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	small ribosomal subunit mitochondrion cytosol
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	structural constituent of ribosome
GO BP Complete:	translation
GO CC Complete:	mitochondrion, small ribosomal subunit, mitochondrial small ribosomal subunit

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
MONBE\|Gene=rps13\|UniProtKB=Q8HIT6	Monosiga brevicollis	O
YEAST\|SGD=S000005025\|UniProtKB=P53937	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AER422C\|UniProtKB=Q755U6	Eremothecium gossypii	O
CANAL\|CGD=CAL0000183829\|UniProtKB=Q5A357	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_B06578g\|UniProtKB=Q6CFI9	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_04468\|UniProtKB=C8V8H2	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_4G07640\|UniProtKB=Q4WP11	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU09539\|UniProtKB=Q7S2C2	Neurospora crassa	O
PHANO\|EnsemblGenome=SNOG_03960\|UniProtKB=Q0UWA4	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPCC1795.07\|UniProtKB=O59772	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00782\|UniProtKB=B6JWK5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNL05120\|UniProtKB=Q5K8M7	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_10227\|UniProtKB=A0A0D1CE85	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_19325\|UniProtKB=E3L9Q3	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_10132\|UniProtKB=F4NXW7	Batrachochytrium dendrobatidis	O
THAPS\|Gene=rps13\|UniProtKB=A0T0Z2	Thalassiosira pseudonana	O
CHLRE\|EnsemblGenome=CHLRE_16g674350v5\|UniProtKB=A8J3J1	Chlamydomonas reinhardtii	O
CHLRE\|EnsemblGenome=CHLRE_12g493950v5\|UniProtKB=A8JDP6	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00008p00089340\|UniProtKB=W1NIG1	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_80G00170\|UniProtKB=A0A0K9NMD8	Zostera marina	O
MUSAM\|EnsemblGenome=Ma02_g16430\|UniProtKB=A0A804I3H5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g30770\|UniProtKB=A0A804IVU7	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_037776mg\|UniProtKB=K4AFW9	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G122400\|UniProtKB=A0A1B6QIN0	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb054380\|UniProtKB=A0A804M2J6	Zea mays	O
ORYSJ\|EnsemblGenome=Os03g0704000\|UniProtKB=Q75IA5	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g10990v3\|UniProtKB=I1GP27	Brachypodium distachyon	O
WHEAT\|EnsemblGenome=TraesCS7D02G028500\|UniProtKB=A0A3B6TID2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G457800\|UniProtKB=A0A3B6I4D9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G032000\|UniProtKB=A0A3B6RAX2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7A02G032300\|UniProtKB=A0A3B6R782	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G041900\|UniProtKB=A0A3B6IJX2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G457400\|UniProtKB=A0A3B6I6L5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G272100\|UniProtKB=I3NM60	Triticum aestivum	O
NELNU\|Gene=LOC104605811\|UniProtKB=A0A1U8AZQ3	Nelumbo nucifera	O
NELNU\|Gene=LOC104605813\|UniProtKB=A0A1U8AZQ7	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_025941\|UniProtKB=A0A1U7ZG14	Nelumbo nucifera	O
SPIOL\|Gene=LOC110786402\|UniProtKB=A0A9R0JU55	Spinacia oleracea	O
SPIOL\|Gene_ORFName=SOVF_121110\|UniProtKB=P82163	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0004701\|UniProtKB=A0A251VM67	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C100036520\|UniProtKB=A0A9R1WGJ0	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a015166mg\|UniProtKB=A0A022Q8P3	Erythranthe guttata	O
SOLTU\|EnsemblGenome=PGSC0003DMG400004122\|UniProtKB=M0ZY84	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc05g005873.1\|UniProtKB=A0A3Q7GBS3	Solanum lycopersicum	O
TOBAC\|Gene=LOC107823491\|UniProtKB=A0A1S4CWV7	Nicotiana tabacum	O
TOBAC\|Gene=LOC107812601\|UniProtKB=A0A1S4BWG5	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi18g00325\|UniProtKB=E0CRC2	Vitis vinifera	O
BRANA\|Gene_ORFName=DARMORV10_A02P21790.1\|UniProtKB=A0A078DE16	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra015657\|UniProtKB=A0A398AIS9	Brassica campestris	LDO
BRACM\|EnsemblGenome=Bra008332\|UniProtKB=M4CVT5	Brassica campestris	LDO
GOSHI\|Gene=LOC107916638\|UniProtKB=A0A1U8KG45	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_035025\|UniProtKB=A0A061FH28	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g031757mg\|UniProtKB=A0A067DIM6	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_002G088400v3\|UniProtKB=A0A2K2BFS4	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_02G159400\|UniProtKB=A0A2C9WFU9	Manihot esculenta	LDO
SOYBN\|EnsemblGenome=GLYMA_02G078000\|UniProtKB=Q8LPW2	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g081120\|UniProtKB=G7JF11	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr13_26920\|UniProtKB=A0A2I4GPL6	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G381850\|UniProtKB=A0A0A0KMX9	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_1G504900\|UniProtKB=A0A251RIA1	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_167206\|UniProtKB=D8R220	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_140847\|UniProtKB=D8QSU4	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c15_12110\|UniProtKB=A0A2K1JCW8	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c24_11830\|UniProtKB=A0A2K1IGF1	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c15_12140\|UniProtKB=A0A2K1JCX0	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0001s0161\|UniProtKB=A0A2R6XVI1	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_008590050\|UniProtKB=A0A1Y1IUC8	Klebsormidium nitens	O
CHLAA\|EnsemblGenome=Caur_2393\|UniProtKB=A9WH90	Chloroflexus aurantiacus	O
STRCO\|Gene_OrderedLocusName=SCO4727\|UniProtKB=O86773	Streptomyces coelicolor	O
MYCTU\|Gene_OrderedLocusName=Rv3460c\|UniProtKB=P9WH61	Mycobacterium tuberculosis	O
MYCGE\|EnsemblGenome=MG_175\|UniProtKB=P47421	mycoplasma genitalium	O
CLOBH\|Gene_OrderedLocusName=CBO3455\|UniProtKB=A5I7I0	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr0213\|UniProtKB=P66393	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_02487\|UniProtKB=Q2FW30	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAD00686\|UniProtKB=P66383	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_01410\|UniProtKB=P20282	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_0156\|UniProtKB=P62175	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1475\|UniProtKB=Q9X1I5	Thermotoga maritima	O
DEIRA\|EnsemblGenome=DR_2125\|UniProtKB=Q9RSJ9	Deinococcus radiodurans	O
GLOVI\|EnsemblGenome=BAC91515\|UniProtKB=Q7NFF2	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17327\|UniProtKB=P73299	Synechocystis	O
LEPIN\|EnsemblGenome=LA_0762\|UniProtKB=Q9XD12	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_2704\|UniProtKB=Q8A499	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_509\|UniProtKB=P0CE04	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB12623\|UniProtKB=Q7UIC7	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_074\|UniProtKB=O66486	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A1424\|UniProtKB=B5YG25	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1005\|UniProtKB=B8E1F7	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN1286\|UniProtKB=Q8RE41	Fusobacterium nucleatum	O
HELPY\|EnsemblGenome=HP_1296\|UniProtKB=P56020	Helicobacter pylori	O
NEIMB\|EnsemblGenome=NMB0165\|UniProtKB=P66386	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU2834\|UniProtKB=Q749B0	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC50643\|UniProtKB=Q89JA6	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_0260\|UniProtKB=P59753	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0799\|UniProtKB=P44380	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_0253\|UniProtKB=Q8EK48	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_2574\|UniProtKB=Q9KP05	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC0916\|UniProtKB=Q9Z3F0	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA4241\|UniProtKB=Q9HWF7	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM3418\|UniProtKB=Q8ZLM1	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0229\|UniProtKB=Q8ZJ90	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE77993\|UniProtKB=P0A7S9	Escherichia coli	O