PANTHER Gene Information

Gene Symbol(s):

RPD1

Organism:

Arabidopsis thaliana

View Gene in Tree


Tree	Reduced Tree

Gene Name:

Protein ROOT PRIMORDIUM DEFECTIVE 1

Gene ID:

504955534

Protein ID:

Q689D6

Persistent Id:

PTN001266615

Alternate Ids:

Q8GWI6(AltAccession)	NP_680759(refSeq)
26452650(GI)	RPD1_ARATH(UniProtKB-ID)
AL035678(EMBL)	AT4G33495(Ensembl)
AT4G33495(Ensembl_TRS)	BAD42412(EMBL-CDS)
RPD1(Symbol)	RPD1(Synonym)
AT4G33495(Ensembl_PRO)	locus:504955534(TAIR)
829487(GeneID)
Show All

PANTHER Classification

PANTHER Family:	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC (PTHR31476)
PANTHER Subfamily:	PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 (PTHR31476:SF9)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding
GO BP Complete:	negative regulation of cell population proliferation, lateral root morphogenesis
GO CC Complete:	chloroplast, mitochondrion

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
AMBTC\|EnsemblGenome=AMTR_s00069p00092600\|UniProtKB=U5D9Z9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_57G00390\|UniProtKB=A0A0K9NVP7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma11_g06410\|UniProtKB=A0A804L4W8	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_032383mg\|UniProtKB=K4A0J4	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G270800\|UniProtKB=A0A1W0W5Z3	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb319060\|UniProtKB=A0A1D6I973	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os01g0617600\|UniProtKB=A0A0P0V5B6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g35750v3\|UniProtKB=A0A2K2CSJ2	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_3g39570v3\|UniProtKB=I1I8B7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.5HG0497930\|UniProtKB=A0A8I6XS26	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS5B02G315000\|UniProtKB=A0A3B6LQR0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G320500\|UniProtKB=A0A3B6MVJ1	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G314300\|UniProtKB=A0A3B6KKD3	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_017922\|UniProtKB=A0A1U8BBC7	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110782480\|UniProtKB=A0A9R0I474	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0385301\|UniProtKB=A0A251U038	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900478730\|UniProtKB=A0A9R1WLV6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a021421mg\|UniProtKB=A0A022Q8S5	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_17263\|UniProtKB=A0A2G2ZBC1	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400026504\|UniProtKB=M1CII4	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc06g063270.3\|UniProtKB=A0A3Q7GV31	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107809370\|UniProtKB=A0A1S4BKQ8	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107787983\|UniProtKB=A0A1S3ZL70	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi16g00975\|UniProtKB=F6HP54	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_K00235\|UniProtKB=A0A058ZX72	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra011447\|UniProtKB=M4D4P3	Brassica campestris	LDO
GOSHI\|Gene=LOC107906852\|UniProtKB=A0A1U8JLE2	Gossypium hirsutum	O
GOSHI\|Gene=LOC107917531\|UniProtKB=A0A1U8KIS6	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107917508\|UniProtKB=A0A1U8KIS0	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_015115\|UniProtKB=A0A061G0P5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g044314mg\|UniProtKB=A0A067EY15	Citrus sinensis	LDO
POPTR\|Gene_ORFName=POPTR_015G141700\|UniProtKB=A0A3N7G1G3	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_14G028000\|UniProtKB=A0A2C9UI76	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1496680\|UniProtKB=B9R9E5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_16G196600\|UniProtKB=K7MIK6	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_2g067960\|UniProtKB=A0A072V947	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g033595\|UniProtKB=A0A072UIR4	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr10_08340\|UniProtKB=A0A2I4HQV2	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G173460\|UniProtKB=A0A0A0KLD1	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G291500\|UniProtKB=A0A251QRB6	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_428942\|UniProtKB=D8T4I6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_451376\|UniProtKB=D8RQ48	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_422954\|UniProtKB=D8SK33	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_451377\|UniProtKB=D8RZH8	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_34883\|UniProtKB=D8R240	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c8_15190\|UniProtKB=A0A2K1K7C9	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c19_1660\|UniProtKB=A0A2K1IWT2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c9_20510\|UniProtKB=A0A2K1K3Z6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c26_560\|UniProtKB=A0A2K1IBB2	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c19_1620\|UniProtKB=A0A2K1IWT4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c18_21300\|UniProtKB=A0A2K1J1V6	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0022s0123\|UniProtKB=A0A2R6XD41	Marchantia polymorpha	O