PANTHER Gene Information

Gene Symbol(s):

thiC

Organism:

Bradyrhizobium diazoefficiens

View Gene in Tree

Tree

Gene Name:

Phosphomethylpyrimidine synthase

Gene ID:

BAC51924

Protein ID:

Q89FP0

Persistent Id:

PTN002412635

Alternate Ids:

Thiamine biosynthesis protein ThiC {ECO:0000255\|HAMAP-Rule:MF_00089}(Synonym)	47606163(GI)
thiC{ECO:0000255\|HAMAP-Rule:MF_00089}(Symbol)	WP_011089399(refSeq)
4.1.99.17 {ECO:0000255\|HAMAP-Rule:MF_00089}(EC)	64026417(GeneID)
BAC51924(Ensembl_TRS)	BAC51924(Ensembl_PRO)
BA000040(EMBL)	THIC_BRADU(UniProtKB-ID)
BAC51924(Ensembl)	BAC51924(EMBL-CDS)
Show All

PANTHER Classification

PANTHER Family:	THIAMINE BIOSYNTHESIS PROTEIN THIC (PTHR30557)
PANTHER Subfamily:	PHOSPHOMETHYLPYRIMIDINE SYNTHASE, CHLOROPLASTIC (PTHR30557:SF1)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, metal ion binding, lyase activity, 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, carbon-carbon lyase activity
GO BP Complete:	thiamine diphosphate biosynthetic process, thiamine biosynthetic process
GO CC Complete:	cytosol

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
THAPS\|EnsemblGenome=THAPSDRAFT_41733\|UniProtKB=B8C8G5	Thalassiosira pseudonana	LDO
CHLRE\|EnsemblGenome=CHLRE_05g240850v5\|UniProtKB=A8J841	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00010p00259490\|UniProtKB=W1NF63	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_2G00050\|UniProtKB=A0A0K9PA89	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g35590\|UniProtKB=A0A804JP33	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_034631mg\|UniProtKB=K4A6X6	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G138000\|UniProtKB=C5WPN8	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb051950\|UniProtKB=C0PEH3	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0679700\|UniProtKB=Q10F62	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g12550v3\|UniProtKB=I1GPL5	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0334210\|UniProtKB=M0W5F2	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4A02G290400\|UniProtKB=A0A3B6I1H3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4D02G021400\|UniProtKB=A0A3B6JDL9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G023800\|UniProtKB=A0A3B6IKQ7	Triticum aestivum	LDO
NELNU\|Gene=LOC104601214\|UniProtKB=A0A1U8AJQ5	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110793158\|UniProtKB=A0A9R0IQI6	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0567641\|UniProtKB=A0A251SMZ8	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0011581\|UniProtKB=A0A251TN66	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500286690\|UniProtKB=A0A9R1VHY6	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a002684mg\|UniProtKB=A0A022RNA8	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_16227\|UniProtKB=A0A2G2Z8I0	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400004151\|UniProtKB=M0ZYC4	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc06g006080.3\|UniProtKB=A0A3Q7GP23	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107782237\|UniProtKB=A0A1S3Z2I2	Nicotiana tabacum	O
TOBAC\|Gene=LOC107810498\|UniProtKB=A0A1S4BPF8	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi06g01739\|UniProtKB=F6GUU1	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B02273\|UniProtKB=A0A059D506	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A05P15770.1\|UniProtKB=A0A078I3N6	Brassica napus	LDO
BRANA\|Gene_ORFName=DARMORV10_C04P21210.1\|UniProtKB=A0A078IWI0	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra018372\|UniProtKB=M4DPD1	Brassica campestris	LDO
ARATH\|TAIR=locus=2060604\|UniProtKB=O82392	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107886049\|UniProtKB=A0A1U8HPZ1	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107950204\|UniProtKB=A0A1U8NND2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_041663\|UniProtKB=A0A061GZX3	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g0059652mg\|UniProtKB=A0A067FUE0	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_009G043200v3\|UniProtKB=B9HP68	Populus trichocarpa	LDO
POPTR\|EnsemblGenome=POPTR_001G249200v3\|UniProtKB=A0A2K2C387	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_02G121700\|UniProtKB=A0A2C9WD81	Manihot esculenta	LDO
MANES\|EnsemblGenome=MANES_01G164200\|UniProtKB=A0A251LS06	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0611460\|UniProtKB=B9SHY3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_11G176200\|UniProtKB=K7LQS4	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_18G065700\|UniProtKB=I1N019	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g462970\|UniProtKB=A0A072UXM9	Medicago truncatula	LDO
MEDTR\|EnsemblGenome=MTR_3g462950\|UniProtKB=A0A072UWI1	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr14_09460\|UniProtKB=A0A2I4DE51	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G528590\|UniProtKB=A0A0A0LXK6	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_6G060700\|UniProtKB=A0A251NL07	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_418436\|UniProtKB=D8S5P6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_120890\|UniProtKB=D8SMR4	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_152730\|UniProtKB=D8S5P4	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c25_5720\|UniProtKB=A0A2K1IDY0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c16_8630\|UniProtKB=A0A2K1J7Q6	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0078s0008\|UniProtKB=A0A2R6WL44	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003300080\|UniProtKB=A0A1Y1I7Y1	Klebsormidium nitens	LDO
NITMS\|EnsemblGenome=Nmar_0543\|UniProtKB=A9A226	Nitrosopumilus maritimus	LDO
SACS2\|EnsemblGenome=SSO1324\|UniProtKB=Q97YJ8	Sulfolobus solfataricus	O
SACS2\|EnsemblGenome=SSO1941\|UniProtKB=Q97X14	Sulfolobus solfataricus	LDO
PYRAE\|EnsemblGenome=PAE0333\|UniProtKB=Q8ZZC0	Pyrobaculum aerophilum	LDO
METAC\|EnsemblGenome=MA_0261\|UniProtKB=Q8TU14	Methanosarcina acetivorans	O
METAC\|EnsemblGenome=MA_4329\|UniProtKB=Q8TI28	Methanosarcina acetivorans	O
METAC\|EnsemblGenome=MA_1790\|UniProtKB=Q8TPW4	Methanosarcina acetivorans	LDO
METJA\|EnsemblGenome=MJ_1026\|UniProtKB=Q58432	Methanocaldococcus jannaschii	LDO
HALSA\|EnsemblGenome=VNG_0715G\|UniProtKB=Q9HRG2	Halobacterium salinarum	LDO
THEKO\|EnsemblGenome=TK0433\|UniProtKB=Q5JD26	Thermococcus kodakaraensis	LDO
STRCO\|Gene_OrderedLocusName=SCO3928\|UniProtKB=Q9X9U0	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv0423c\|UniProtKB=P9WG79	Mycobacterium tuberculosis	LDO
CLOBH\|Gene_OrderedLocusName=CBO2911\|UniProtKB=A5I5Z5	Clostridium botulinum	LDO
BACSU\|EnsemblGenome=BSU_08790\|UniProtKB=P45740	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_5227\|UniProtKB=Q815D5	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_0788\|UniProtKB=Q9WZP5	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_A0175\|UniProtKB=Q9RYX8	Deinococcus radiodurans	LDO
GLOVI\|EnsemblGenome=BAC89059\|UniProtKB=Q7NLK5	Gloeobacter violaceus	LDO
SYNY3\|EnsemblGenome=BAA10656\|UniProtKB=Q55894	Synechocystis	LDO
LEPIN\|EnsemblGenome=LA_0980\|UniProtKB=Q8F7G5	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_0650\|UniProtKB=Q8AA15	Bacteroides thetaiotaomicron	LDO
RHOBA\|EnsemblGenome=RB7206\|UniProtKB=Q7UP26	Rhodopirellula baltica	LDO
AQUAE\|EnsemblGenome=aq_1204\|UniProtKB=O67259	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A0445\|UniProtKB=B5YJ75	Thermodesulfovibrio yellowstonii	LDO
DICTD\|EnsemblGenome=Dtur_1661\|UniProtKB=B8E359	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN1757\|UniProtKB=Q8RI60	Fusobacterium nucleatum	LDO
NEIMB\|EnsemblGenome=NMB2040\|UniProtKB=Q9JXI0	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU3005\|UniProtKB=P61425	Geobacter sulfurreducens	O
GEOSL\|EnsemblGenome=GSU0604\|UniProtKB=Q74FK3	Geobacter sulfurreducens	LDO
COXBU\|EnsemblGenome=CBU_0330\|UniProtKB=Q83EJ0	Coxiella burnetii	LDO
SHEON\|Gene_OrderedLocusName=SO_2445\|UniProtKB=Q8EED7	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_0061\|UniProtKB=Q9KVS8	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC3319\|UniProtKB=Q8P5L9	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA4973\|UniProtKB=Q9HUJ2	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM4164\|UniProtKB=Q9L9I7	Salmonella typhimurium	LDO
YERPE\|EnsemblGenome=YP_3102\|UniProtKB=Q8ZAQ2	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77325\|UniProtKB=P30136	Escherichia coli	LDO