PANTHER Gene Information

Gene Symbol(s):

LOC118403826

Organism:

Branchiostoma floridae

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Gene Name:

Collagen alpha-4(IV) chain-like

Gene ID:

LOC118403826

Protein ID:

A0A9J7HIB0

Persistent Id:

PTN009075098

Alternate Ids:

XP_035658572(refSeq)	A0A9J7HIB0(Synonym)
A0A9J7HIB0_BRAFL(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	COLLAGEN ALPHA (PTHR24023)
PANTHER Subfamily:	COLLAGEN ALPHA-4(IV) CHAIN-LIKE (PTHR24023:SF1109)
PANTHER GO-slim Molecular Function:	extracellular matrix structural constituent
PANTHER GO-slim Biological Process:	extracellular matrix organization
PANTHER GO-slim Cellular Component:	extracellular space collagen-containing extracellular matrix
PANTHER protein class:	extracellular matrix structural protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	extracellular matrix structural constituent conferring tensile strength, extracellular matrix structural constituent
GO BP Complete:	extracellular matrix organization
GO CC Complete:	basement membrane, extracellular space, collagen trimer, extracellular region

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=2214\|UniProtKB=Q02388	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000014891.7\|UniProtKB=H2QMJ5	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000007118.3\|UniProtKB=G3QW83	Gorilla gorilla gorilla	O
MOUSE\|MGI=MGI=88462\|UniProtKB=Q63870	Mus musculus	O
RAT\|RGD=1311417\|UniProtKB=D3ZE04	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000011355.5\|UniProtKB=F1SKM1	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000040881.2\|UniProtKB=A0A9L0T4M1	Equus caballus	O
LEPOC\|Ensembl=ENSLOCG00000014567.1\|UniProtKB=W5NBC8	lepisosteus oculatus	O
GORGO\|Ensembl=ENSGGOG00000001462.4\|UniProtKB=G3QGJ0	Gorilla gorilla gorilla	O
RAT\|RGD=1565398\|UniProtKB=D3ZUL3	Rattus norvegicus	O
CHICK\|Gene=COL6A1\|UniProtKB=P20785	Gallus gallus	O
LEPOC\|Ensembl=ENSLOCG00000016918.1\|UniProtKB=W5NJW7	lepisosteus oculatus	O
HUMAN\|HGNC=20821\|UniProtKB=Q17RW2	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000052159.1\|UniProtKB=A0A2I3RU50	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000000424.4\|UniProtKB=G3QDU7	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000056386.1\|UniProtKB=A0A5F7Z8Y8	Macaca mulatta	O
MOUSE\|MGI=MGI=1918605\|UniProtKB=Q30D77	Mus musculus	O
RAT\|RGD=1565539\|UniProtKB=F1M748	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000031738.3\|UniProtKB=A0A8W4FDC1	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000023199.4\|UniProtKB=A0A9L0RAM8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000033986.3\|UniProtKB=A0A2I2UVY3	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845022035.1\|UniProtKB=A0A8I3PF15	Canis lupus familiaris	O
ORNAN\|Ensembl=ENSOANG00000047756.1\|UniProtKB=A0A6I8NM81	Ornithorhynchus anatinus	O
XENLA\|Gene=col24a1.L\|UniProtKB=A0A1L8GLN8	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-980334\|UniProtKB=A0A6I8QGT8	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000010431.2\|UniProtKB=H2M3R5	Oryzias latipes	O
LEPOC\|Ensembl=ENSLOCG00000003177.1\|UniProtKB=W5M5Y4	lepisosteus oculatus	O
LEPOC\|Ensembl=ENSLOCG00000005315.1\|UniProtKB=W5MDK5	lepisosteus oculatus	O
XENLA\|Gene=LOC108716915\|UniProtKB=A0A1L8G9G5	Xenopus laevis	O
XENLA\|Gene=LOC108718011\|UniProtKB=A0A1L8G3F9	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000032045\|UniProtKB=A0A6I8PL59	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000029293.1\|UniProtKB=A0A3B3IBZ5	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-130530-763\|UniProtKB=E7EXE7	Danio rerio	O
HUMAN\|HGNC=2192\|UniProtKB=P39059	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000029189.4\|UniProtKB=K7D0K0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000001022.3\|UniProtKB=G3SEJ6	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000011582.4\|UniProtKB=F6PP96	Macaca mulatta	O
MOUSE\|MGI=MGI=88449\|UniProtKB=O35206	Mus musculus	O
RAT\|RGD=1310820\|UniProtKB=A0A0G2JV12	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000010082.6\|UniProtKB=A0A3Q1M0N0	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000005380.5\|UniProtKB=F1SSE8	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000021211.4\|UniProtKB=F6Q947	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000012233.6\|UniProtKB=M3WGK0	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845007464.1\|UniProtKB=A0A8I3N1V6	Canis lupus familiaris	O
LEPOC\|Ensembl=ENSLOCG00000011911.1\|UniProtKB=W5N210	lepisosteus oculatus	O
HUMAN\|HGNC=22989\|UniProtKB=Q8NFW1	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000020613.6\|UniProtKB=H2QWR6	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000010041.3\|UniProtKB=G3R3K3	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000047643.2\|UniProtKB=A0A1D5R409	Macaca mulatta	O
MOUSE\|MGI=MGI=1916950\|UniProtKB=E9Q7P1	Mus musculus	O
RAT\|RGD=1309081\|UniProtKB=F1M897	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000005938.5\|UniProtKB=F1RSI7	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000041368.2\|UniProtKB=A0A9L0TPS7	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000040466.2\|UniProtKB=A0A337SRA6	Felis catus	O
CHICK\|Ensembl=ENSGALG00010008946.1\|UniProtKB=A0A8V0Y3V0	Gallus gallus	O
XENLA\|Gene=LOC108719434\|UniProtKB=A0A1L8G028	Xenopus laevis	O
XENTR\|Gene=col22a1\|UniProtKB=A0A8J1JRS9	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000015661.2\|UniProtKB=H2MLM9	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-050327-86\|UniProtKB=Q58EP8	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000004159.1\|UniProtKB=W5M9C7	lepisosteus oculatus	O
ORYLA\|Ensembl=ENSORLG00000013366.2\|UniProtKB=H2MDV9	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-090827-2\|UniProtKB=M5BFV8	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000008957.1\|UniProtKB=W5MRD0	lepisosteus oculatus	O
LEPOC\|Ensembl=ENSLOCG00000003807.1\|UniProtKB=W5M865	lepisosteus oculatus	O
MOUSE\|MGI=MGI=1309998\|UniProtKB=Q60754	Mus musculus	O
RAT\|RGD=1589662\|UniProtKB=M0R9F7	Rattus norvegicus	O
DANRE\|ZFIN=ZDB-GENE-160503-1\|UniProtKB=A0A060Q6E4	Danio rerio	O
DANRE\|ZFIN=ZDB-GENE-070705-84\|UniProtKB=C0H5W1	Danio rerio	O
CHICK\|Ensembl=ENSGALG00010028890.1\|UniProtKB=A0A8V1ALZ8	Gallus gallus	O
DANRE\|Gene=si=ch211-196i2.1\|UniProtKB=A0A8M3AWR9	Danio rerio	O
HUMAN\|HGNC=2219\|UniProtKB=Q14050	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000013721.6\|UniProtKB=H2QKR5	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000017028.3\|UniProtKB=G3RLH9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000016859.4\|UniProtKB=A0A5F7ZM57	Macaca mulatta	O
MOUSE\|MGI=MGI=894686\|UniProtKB=A2ACT7	Mus musculus	O
RAT\|RGD=1310255\|UniProtKB=D3ZX71	Rattus norvegicus	O
PIG\|Ensembl=ENSSSCG00000040554.3\|UniProtKB=A0A287AD51	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000023357.4\|UniProtKB=A0A9L0S245	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000001332.6\|UniProtKB=M3VWG3	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845018010.1\|UniProtKB=A0A8I3P613	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000016823.4\|UniProtKB=F7FIF6	Monodelphis domestica	O
CHICK\|Ensembl=ENSGALG00010022320.1\|UniProtKB=Q90800	Gallus gallus	O
CHICK\|Gene=COL9A3\|UniProtKB=P32017	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000005213.4\|UniProtKB=G1KE17	Anolis carolinensis	O
XENLA\|Gene=col9a3.L\|UniProtKB=Q6DE50	Xenopus laevis	O
XENLA\|Gene=col9a3.S\|UniProtKB=A0A8J0TZA7	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-997413\|UniProtKB=B1H3F6	Xenopus tropicalis	O
CHICK\|Ensembl=ENSGALG00010020896.1\|UniProtKB=Q9I8D5	Gallus gallus	O
XENLA\|Gene=marco.S\|UniProtKB=A0A8J0TYB8	Xenopus laevis	O
HUMAN\|HGNC=2190\|UniProtKB=Q5TAT6	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000002579.7\|UniProtKB=H2R296	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000005032.3\|UniProtKB=G3QQR9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000005716.4\|UniProtKB=F6TQV4	Macaca mulatta	O
MOUSE\|MGI=MGI=1277201\|UniProtKB=Q9R1N9	Mus musculus	O
RAT\|RGD=1595704\|UniProtKB=A0A0G2K2Q8	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000011741.6\|UniProtKB=F6RND5	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000010256.5\|UniProtKB=A0A5G2RNE8	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000018359.4\|UniProtKB=F6ZAH8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000041886.2\|UniProtKB=A0A5F5XLK2	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845003810.1\|UniProtKB=A0A8I3MJI6	Canis lupus familiaris	O
HUMAN\|HGNC=2193\|UniProtKB=Q07092	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000000464.7\|UniProtKB=K7BGM3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015740.3\|UniProtKB=G3RI89	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000023398.4\|UniProtKB=F7FE47	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1095396\|UniProtKB=Q8BLX7	Mus musculus	LDO
BOVIN\|Ensembl=ENSBTAG00000010050.6\|UniProtKB=G3MXK9	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000003603.5\|UniProtKB=A0A5G2QW73	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000024119.4\|UniProtKB=A0A9L0REK1	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000015669.6\|UniProtKB=M3WN20	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845005746.1\|UniProtKB=A0A8I3MQ67	Canis lupus familiaris	LDO
CHICK\|Ensembl=ENSGALG00010022502.1\|UniProtKB=A0A8V0ZQJ6	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000027434.2\|UniProtKB=H9GU57	Anolis carolinensis	O
CHICK\|Ensembl=ENSGALG00010017250.1\|UniProtKB=A0A8V0Z1M4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000010273.3\|UniProtKB=A0A803T999	Anolis carolinensis	LDO
XENLA\|Gene=LOC121398112\|UniProtKB=A0A8J1LUA9	Xenopus laevis	O
XENTR\|Ensembl=ENSXETG00000036828\|UniProtKB=A0A6I8SG44	Xenopus tropicalis	O
XENLA\|Gene=LOC108709583\|UniProtKB=A0A8J1ME10	Xenopus laevis	O
XENLA\|Gene=col16a1.L\|UniProtKB=A0A8J1MAK3	Xenopus laevis	LDO
XENTR\|Gene=col16a1\|UniProtKB=A0A8J1J6X0	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000006729.2\|UniProtKB=A0A3B3HI08	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000018034.2\|UniProtKB=H2MUX9	Oryzias latipes	LDO
DANRE\|Gene=col19a1\|UniProtKB=A0A8M9Q1B4	Danio rerio	O
DANRE\|Gene=col16a1\|UniProtKB=A0A8M9PNN1	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000001473.1\|UniProtKB=W5M067	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000008423.3\|UniProtKB=F6UEW3	Ciona intestinalis	LDO
STRPU\|EnsemblGenome=LOC762753\|UniProtKB=A0A7M7PM44	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC105445661\|UniProtKB=A0A7M7LWH5	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC575353\|UniProtKB=A0A7M7N1V0	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC576214\|UniProtKB=A0A7M7N489	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC589794\|UniProtKB=A0A7M7PNY6	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00000674\|UniProtKB=O76368	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG01652\|UniProtKB=A8WR59	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00000689\|UniProtKB=Q9N3X9	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00002280\|UniProtKB=P17140	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG16372\|UniProtKB=A8XNK9	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00107315\|UniProtKB=A0A2A6C679	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0260660\|UniProtKB=M9ND55	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP029898\|UniProtKB=A0A903XVV4	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP009599\|UniProtKB=A0A1S4H1L4	Anopheles gambiae	O
ANOGA\|EnsemblGenome=AGAP009201\|UniProtKB=A0A1S4H170	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC014326\|UniProtKB=D6WLB9	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC031632\|UniProtKB=A0A139WAT8	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_307295\|UniProtKB=E9H1N7	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW022619\|UniProtKB=B7Q9Z7	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG191307\|UniProtKB=T1FSV3	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG109453\|UniProtKB=T1EET9	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g80945\|UniProtKB=A7RG67	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g238343\|UniProtKB=A7RHP3	Nematostella vectensis	O
MONBE\|EnsemblGenome=MONBRDRAFT_11132\|UniProtKB=A9V8A7	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_28937\|UniProtKB=A9V9M1	Monosiga brevicollis	O
NITMS\|EnsemblGenome=Nmar_0682\|UniProtKB=A9A489	Nitrosopumilus maritimus	O