PANTHER Gene Information

Gene Symbol(s):

ifa-1

Organism:

Caenorhabditis briggsae

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Gene Name:

Protein CBR-IFA-1

Gene ID:

CBG17384

Protein ID:

A8XQY3

Persistent Id:

PTN000581718

Alternate Ids:

8585993(GeneID)	WBGene00037027(WormBase)
XP_002644000(refSeq)	HE600924(EMBL)
268578035(GI)	A8XQY3_CAEBR(UniProtKB-ID)
A8XQY3(Synonym)	CAP35058(EMBL-CDS)
CBP38960(WormBase_PRO)	CBG17384a(WormBase_TRS)
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PANTHER Classification

PANTHER Family:	LAMIN DM0-RELATED (PTHR45721)
PANTHER Subfamily:	INTERMEDIATE FILAMENT PROTEIN IFA-1 (PTHR45721:SF12)
PANTHER GO-slim Molecular Function:	structural constituent of cytoskeleton
PANTHER GO-slim Biological Process:	heterochromatin formation protein-containing complex localization localization within membrane nuclear envelope organization protein localization to nucleus nuclear migration
PANTHER GO-slim Cellular Component:	nuclear envelope nuclear periphery
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	structural constituent of cytoskeleton
GO BP Complete:	nuclear pore localization, nuclear envelope organization, protein localization to nuclear envelope, cytoskeleton organization, heterochromatin formation, nuclear migration
GO CC Complete:	nuclear envelope, intermediate filament, nuclear lamina

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=6638\|UniProtKB=Q03252	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000010238.4\|UniProtKB=H2QEX0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000003462.3\|UniProtKB=A0A2I2YFV4	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000001192.4\|UniProtKB=A0A5F8A330	Macaca mulatta	O
MOUSE\|MGI=MGI=96796\|UniProtKB=P21619	Mus musculus	O
RAT\|RGD=1596494\|UniProtKB=D3ZRE8	Rattus norvegicus	O
RAT\|RGD=1563803\|UniProtKB=D3ZLC1	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000013624.6\|UniProtKB=F1MJI7	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000026784.4\|UniProtKB=A0A287ADV8	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011017.3\|UniProtKB=A0A3Q2HU54	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000013045.6\|UniProtKB=A0A5F5XEX8	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845011756.1\|UniProtKB=A0A8I3NGI5	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000004824.5\|UniProtKB=F6UM44	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000010017.3\|UniProtKB=F6YXI4	Ornithorhynchus anatinus	O
CHICK\|Gene=LMNB2\|UniProtKB=P14732	Gallus gallus	O
CHICK\|Ensembl=ENSGALG00010028375.1\|UniProtKB=A0A3Q2U596	Gallus gallus	O
XENLA\|Gene=LAML2_XENLA\|UniProtKB=P21910	Xenopus laevis	O
XENLA\|Gene=lmnb2.S\|UniProtKB=Q6GPC2	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-490443\|UniProtKB=A0A6I8S2R6	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000002671.2\|UniProtKB=H2LBQ7	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-990630-13\|UniProtKB=B3DFN3	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000003086.1\|UniProtKB=W5M5I2	lepisosteus oculatus	O
HUMAN\|HGNC=6636\|UniProtKB=P02545	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000001447.7\|UniProtKB=H2Q091	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000000813.3\|UniProtKB=G3QEU9	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000016096.4\|UniProtKB=F6W890	Macaca mulatta	O
MOUSE\|MGI=MGI=96794\|UniProtKB=P48678	Mus musculus	O
RAT\|RGD=620456\|UniProtKB=P48679	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000017574.5\|UniProtKB=F1MYG5	Bos taurus	O
PIG\|Ensembl=ENSSSCG00035036372\|UniProtKB=Q3ZD69	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000006496.5\|UniProtKB=A0A480NRZ3	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011097.4\|UniProtKB=A0A9L0RWC4	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000011776.6\|UniProtKB=M3WFR2	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845010163.1\|UniProtKB=A0A8I3NEK0	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000016946.4\|UniProtKB=F6V6C6	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000012813.3\|UniProtKB=F7A5P3	Ornithorhynchus anatinus	O
CHICK\|Gene=LMNA\|UniProtKB=P13648	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000017030.4\|UniProtKB=A0A803T3H5	Anolis carolinensis	O
XENLA\|Gene=lmna\|UniProtKB=P11048	Xenopus laevis	O
XENLA\|Gene=LOC108700617\|UniProtKB=A0A8J1LLV3	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-920722\|UniProtKB=Q28BY8	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000016113.2\|UniProtKB=H2MN62	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000008984.2\|UniProtKB=H2LYQ0	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-020424-3\|UniProtKB=B3DKC5	Danio rerio	O
ORNAN\|Ensembl=ENSOANG00000020741.3\|UniProtKB=F7ECP2	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010016888.1\|UniProtKB=A0A8V0YZZ4	Gallus gallus	O
XENLA\|Gene=LAML3_XENLA\|UniProtKB=P10999	Xenopus laevis	O
XENLA\|Gene=lmnb3.S\|UniProtKB=A0A8J0UN32	Xenopus laevis	O
XENLA\|Gene=lmnb3.L\|UniProtKB=A0A1L8H0P1	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-920613\|UniProtKB=A4IHY3	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000019004.2\|UniProtKB=A0A3B3HRR0	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-020424-4\|UniProtKB=Q6P0Z0	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000012885.1\|UniProtKB=W5N5G1	lepisosteus oculatus	O
HUMAN\|HGNC=6637\|UniProtKB=P20700	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000046590.1\|UniProtKB=H2QRE7	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000007999.3\|UniProtKB=G3RWL2	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000000823.4\|UniProtKB=I2CV36	Macaca mulatta	O
MOUSE\|MGI=MGI=96795\|UniProtKB=P14733	Mus musculus	O
RAT\|RGD=620522\|UniProtKB=P70615	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000002882.6\|UniProtKB=A7YY47	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000014248.5\|UniProtKB=F1RKM0	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000007942.3\|UniProtKB=F6UCU8	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000003146.6\|UniProtKB=M3VZT0	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845010706.1\|UniProtKB=A0A8I3NBF9	Canis lupus familiaris	O
ORNAN\|Ensembl=ENSOANG00000011225.3\|UniProtKB=F7FBS6	Ornithorhynchus anatinus	O
CHICK\|Gene=LMNB1\|UniProtKB=P14731	Gallus gallus	O
CHICK\|Ensembl=ENSGALG00010012607.1\|UniProtKB=A0A8V0YN43	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000002780.4\|UniProtKB=G1KB81	Anolis carolinensis	O
XENLA\|Gene=lmnb1.L\|UniProtKB=Q8AVZ3	Xenopus laevis	O
XENLA\|Gene=LAML1_XENLA\|UniProtKB=P09010	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-489658\|UniProtKB=Q6P4J9	Xenopus tropicalis	O
DANRE\|ZFIN=ZDB-GENE-020424-2\|UniProtKB=F1QHC4	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000008506.1\|UniProtKB=W5MPP5	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000000897.3\|UniProtKB=F6U1H7	Ciona intestinalis	O
BRAFL\|Gene=LOC118409698\|UniProtKB=A0A9J7KMP2	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC576396\|UniProtKB=A0A7M7P1B8	Strongylocentrotus purpuratus	O
STRPU\|EnsemblGenome=LOC373247\|UniProtKB=Q9TX29	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00002050\|UniProtKB=P90901	Caenorhabditis elegans	LDO
PRIPA\|EnsemblGenome=WBGene00273533\|UniProtKB=A0A2A6B617	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00093410\|UniProtKB=A0A2A6D1W1	Pristionchus pacificus	LDO
HELRO\|EnsemblGenome=HelroG173940\|UniProtKB=T1F7E4	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG90252\|UniProtKB=T1G7N3	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG173304\|UniProtKB=T1F6N5	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG154543\|UniProtKB=T1ELF0	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG92478\|UniProtKB=T1G8H0	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG186040\|UniProtKB=T1FNK9	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG185279\|UniProtKB=T1FML6	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG72466\|UniProtKB=T1G105	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG185776\|UniProtKB=T1FNA0	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g170348\|UniProtKB=A7SGD1	Nematostella vectensis	O
LEIMA\|EnsemblGenome=LMJF_31_0130\|UniProtKB=Q4Q6Q1	Leishmania major	O
GIAIC\|EnsemblGenome=GL50803_115245\|UniProtKB=A8BUP1	Giardia intestinalis	O