PANTHER Gene Information

Gene Symbol(s):

ubf

Organism:

Ciona intestinalis

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Gene Name:

HMG box domain-containing protein

Gene ID:

ENSCING00000011375.2

Protein ID:

F6U831

Persistent Id:

PTN001416139

Alternate Ids:

F6U831_CIOIN(UniProtKB-ID)	699238584(GI)
ENSCING00000011375(Ensembl)	XP_009857508(refSeq)
F6U831(Synonym)	EAAA01001550(EMBL)
ENSCINP00000021757(Ensembl_PRO)	ENSCINT00000022003(Ensembl_TRS)
778787(GeneID)
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PANTHER Classification

PANTHER Family:	UPSTREAM BINDING TRANSCRIPTION FACTOR (PTHR46318)
PANTHER Subfamily:	UPSTREAM BINDING TRANSCRIPTION FACTOR (PTHR46318:SF3)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	DNA-binding transcription factor

Pathway Categories:

General transcription by RNA polymerase I

UBF1

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	DNA binding, RNA polymerase I core promoter sequence-specific DNA binding, RNA polymerase I general transcription initiation factor activity
GO BP Complete:	RNA polymerase I preinitiation complex assembly, transcription by RNA polymerase I, positive regulation of transcription by RNA polymerase I
GO CC Complete:	nucleus, intracellular membrane-bounded organelle

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=35406\|UniProtKB=P0CB48	Homo sapiens	O
HUMAN\|HGNC=14533\|UniProtKB=P0CB47	Homo sapiens	O
MOUSE\|MGI=MGI=3588290\|UniProtKB=Q3USZ2	Mus musculus	O
RAT\|RGD=41128381\|UniProtKB=A0A8I5Y0B7	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000046740.2\|UniProtKB=G3N2A6	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000034921.4\|UniProtKB=F1MP59	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000014929.3\|UniProtKB=F1STP6	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000038588.3\|UniProtKB=A0A286ZYL9	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000045892.1\|UniProtKB=A0A9L0TJ22	Equus caballus	O
HORSE\|Ensembl=ENSECAG00000028200.3\|UniProtKB=A0A3Q2L3X5	Equus caballus	O
HUMAN\|HGNC=12511\|UniProtKB=P17480	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000009269.6\|UniProtKB=K7B7K3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000010964.3\|UniProtKB=A0A2I2YRV4	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000019924.4\|UniProtKB=G7NIX4	Macaca mulatta	LDO
MOUSE\|MGI=MGI=98512\|UniProtKB=P25976	Mus musculus	LDO
RAT\|RGD=3927\|UniProtKB=P25977	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000005067.6\|UniProtKB=F1MCZ7	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000017360.5\|UniProtKB=A0A287BRK7	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000019162.4\|UniProtKB=A0A3Q2H5S6	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000003050.6\|UniProtKB=M3VZM3	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845008774.1\|UniProtKB=A0A8I3RWB0	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000024054.4\|UniProtKB=A0A5F8GFL3	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000039404.1\|UniProtKB=A0A6I8P7T3	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010024910.1\|UniProtKB=A0A8V1A889	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000017186.3\|UniProtKB=G1KTM9	Anolis carolinensis	LDO
XENLA\|Gene=ubtf.L\|UniProtKB=A0A8J0TJ61	Xenopus laevis	O
XENLA\|Gene=ubtf-a\|UniProtKB=P25979	Xenopus laevis	O
XENLA\|Gene=ubtf-b\|UniProtKB=P25980	Xenopus laevis	O
XENLA\|Gene=ubtf.S\|UniProtKB=Q8AVJ8	Xenopus laevis	LDO
XENTR\|Ensembl=ENSXETG00000049140\|UniProtKB=A0A803JT49	Xenopus tropicalis	O
XENTR\|Xenbase=XB-GENE-966565\|UniProtKB=A0A7D9NK92	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000005485.2\|UniProtKB=A0A3B3ICS0	Oryzias latipes	O
ORYLA\|Ensembl=ENSORLG00000002593.3\|UniProtKB=H2LBF9	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030616-252\|UniProtKB=F1QZ83	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000012057.1\|UniProtKB=W5N2H8	lepisosteus oculatus	LDO
ORYLA\|Ensembl=ENSORLG00000028093.1\|UniProtKB=A0A3B3I6W5	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-040426-1159\|UniProtKB=B0S7C3	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000010224.1\|UniProtKB=W5MVX2	lepisosteus oculatus	O
BRAFL\|Gene=LOC118404176\|UniProtKB=A0A9J7KEI3	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC593781\|UniProtKB=A0A7M7N217	Strongylocentrotus purpuratus	LDO
ANOGA\|EnsemblGenome=AGAP008897\|UniProtKB=A0A1S4GZJ9	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC009280\|UniProtKB=D6WS16	Tribolium castaneum	LDO
TRICA\|EnsemblGenome=TC030885\|UniProtKB=A0A139WPA9	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_302707\|UniProtKB=E9HP99	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_314512\|UniProtKB=E9G6E2	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_319765\|UniProtKB=E9GMS1	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_221844\|UniProtKB=E9FZX8	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_114234\|UniProtKB=E9HHH0	Daphnia pulex	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_104634\|UniProtKB=E9GMV1	Daphnia pulex	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_303621\|UniProtKB=E9HRX9	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW013307\|UniProtKB=B7QA74	Ixodes scapularis	LDO
TRIAD\|EnsemblGenome=TriadG58452\|UniProtKB=B3S2C1	Trichoplax adhaerens	LDO