PANTHER Gene Information

Gene Symbol(s):

pdeD

Organism:

Escherichia coli

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Gene Name:

Probable cyclic di-GMP phosphodiesterase PdeD

Gene ID:

BAA15622

Protein ID:

P76261

Persistent Id:

PTN002105436

Alternate Ids:

BAA15622(EMBL-CDS)	802135288(GI)
BAA15622(Ensembl_TRS)	AP009048(EMBL)
pdeD{ECO:0000303\|PubMed:26148715}(Symbol)	PDED(Synonym)
66674296(GeneID)	AAC74885(Ensembl_PRO)
P97188(AltAccession)	PDED_ECOLI(UniProtKB-ID)
EcoCyc:G6996-MON(BioCyc)	WP_001295494(refSeq)
b1815(Ensembl)	3.1.4.52 {ECO:0000250\|UniProtKB:P21514}(EC)
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PANTHER Classification

PANTHER Family:	CYCLIC DI-GMP PHOSPHODIESTERASE PDEF (PTHR33121)
PANTHER Subfamily:	CYCLIC DI-GMP PHOSPHODIESTERASE PDED-RELATED (PTHR33121:SF79)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	phosphodiesterase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	cyclic-guanylate-specific phosphodiesterase activity, hydrolase activity
GO BP Complete:	DNA damage response
GO CC Complete:	cytosol, outer membrane-bounded periplasmic space, plasma membrane

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g224434\|UniProtKB=A7TAA7	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g226100\|UniProtKB=A8DWU2	Nematostella vectensis	O
PHYRM\|Gene=H3GUV7_PHYRM\|UniProtKB=H3GUV7	Phytophthora ramorum	O
RICCO\|Gene_ORFName=RCOM_1941530\|UniProtKB=B9TG19	Ricinus communis	O
RICCO\|Gene_ORFName=RCOM_1889530\|UniProtKB=B9TF86	Ricinus communis	O
RICCO\|Gene_ORFName=RCOM_1829540\|UniProtKB=B9TGJ8	Ricinus communis	O
CLOBH\|Gene_OrderedLocusName=CBO0357\|UniProtKB=A5HYQ1	Clostridium botulinum	O
LISMO\|Gene=Q8Y5Y9_LISMO\|UniProtKB=Q8Y5Y9	Listeria monocytogenes	O
LISMO\|Gene=Q8YAJ4_LISMO\|UniProtKB=Q8YAJ4	Listeria monocytogenes	O
BACCR\|EnsemblGenome=BC_0547\|UniProtKB=Q81I70	Bacillus cereus	O
BACCR\|EnsemblGenome=BC_0628\|UniProtKB=Q81HZ8	Bacillus cereus	O
DEIRA\|EnsemblGenome=DR_2299\|UniProtKB=Q9RS28	Deinococcus radiodurans	O
SYNY3\|Gene=P72971_SYNY3\|UniProtKB=P72971	Synechocystis	O
SYNY3\|Gene=Q6YRP4_SYNY3\|UniProtKB=Q6YRP4	Synechocystis	O
SYNY3\|Gene=P72746_SYNY3\|UniProtKB=P72746	Synechocystis	O
SYNY3\|EnsemblGenome=BAA18187\|UniProtKB=P74101	Synechocystis	O
SYNY3\|Gene=P72747_SYNY3\|UniProtKB=P72747	Synechocystis	O
SYNY3\|Gene=P72748_SYNY3\|UniProtKB=P72748	Synechocystis	O
SYNY3\|Gene=Q55427_SYNY3\|UniProtKB=Q55427	Synechocystis	O
SYNY3\|Gene=P74293_SYNY3\|UniProtKB=P74293	Synechocystis	O
SYNY3\|Gene=Q79EE5_SYNY3\|UniProtKB=Q79EE5	Synechocystis	O
SYNY3\|EnsemblGenome=BAA10536\|UniProtKB=Q55434	Synechocystis	O
LEPIN\|EnsemblGenome=LB_261\|UniProtKB=Q8EXF2	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LB_235\|UniProtKB=Q8EXH7	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LA_1185\|UniProtKB=Q8F6W5	Leptospira interrogans	O
LEPIN\|EnsemblGenome=LA_3909\|UniProtKB=Q8EZE5	Leptospira interrogans	O
AQUAE\|EnsemblGenome=aq_083\|UniProtKB=O66495	Aquifex aeolicus	O
AQUAE\|EnsemblGenome=aq_1442\|UniProtKB=O67430	Aquifex aeolicus	O
AQUAE\|EnsemblGenome=aq_367\|UniProtKB=O66691	Aquifex aeolicus	O
AQUAE\|EnsemblGenome=aq_027\|UniProtKB=O66446	Aquifex aeolicus	O
AQUAE\|EnsemblGenome=aq_341\|UniProtKB=O66672	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A0172\|UniProtKB=B5YHV7	Thermodesulfovibrio yellowstonii	O
BRADU\|Gene=Q89DG2_BRADU\|UniProtKB=Q89DG2	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89VU4_BRADU\|UniProtKB=Q89VU4	Bradyrhizobium diazoefficiens	O
BRADU\|Gene=Q89U68_BRADU\|UniProtKB=Q89U68	Bradyrhizobium diazoefficiens	LDO
SHEON\|Gene_OrderedLocusName=SO_2507\|UniProtKB=Q8EE82	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_4323\|UniProtKB=Q8E9G0	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_2539\|UniProtKB=Q8EE51	Shewanella oneidensis	LDO
SHEON\|Gene_OrderedLocusName=SO_3821\|UniProtKB=Q8EAS2	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_4734\|UniProtKB=Q8E8D1	Shewanella oneidensis	O
SHEON\|Gene_OrderedLocusName=SO_3084\|UniProtKB=Q8ECQ1	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_1934\|UniProtKB=Q9KQR4	Vibrio cholerae	O
VIBCH\|EnsemblGenome=VC_0130\|UniProtKB=Q9KVL2	Vibrio cholerae	O
VIBCH\|EnsemblGenome=VC_A0080\|UniProtKB=Q9KN85	Vibrio cholerae	LDO
VIBCH\|EnsemblGenome=VC_1086\|UniProtKB=Q9KT19	Vibrio cholerae	O
VIBCH\|EnsemblGenome=VC_1710\|UniProtKB=Q9KRD2	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC2703\|UniProtKB=Q8P7A8	Xanthomonas campestris	O
XANCP\|EnsemblGenome=XCC3523\|UniProtKB=Q8P525	Xanthomonas campestris	O
XANCP\|EnsemblGenome=XCC3877\|UniProtKB=Q8P439	Xanthomonas campestris	O
XANCP\|EnsemblGenome=XCC2291\|UniProtKB=Q8P8F1	Xanthomonas campestris	O
XANCP\|EnsemblGenome=XCC1911\|UniProtKB=Q8P9F4	Xanthomonas campestris	LDO
XANCP\|EnsemblGenome=XCC2274\|UniProtKB=Q8P8G7	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA2200\|UniProtKB=Q9I1R7	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA3311\|UniProtKB=Q9HYT3	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA2818\|UniProtKB=Q9I025	Pseudomonas aeruginosa	O
PSEAE\|EnsemblGenome=PA5442\|UniProtKB=Q9HTC4	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM1827\|UniProtKB=Q8ZP06	Salmonella typhimurium	LDO