PANTHER Gene Information

Gene Symbol(s):

LOC109012023

Organism:

Juglans regia

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Tree

Gene Name:

DNA mismatch repair protein MSH2

Gene ID:

Jr06_13790

Protein ID:

A0A6P9EF94

Persistent Id:

PTN007502988

Alternate Ids:

A0A6P9EF94_JUGRE(UniProtKB-ID)	KAF5468977(EMBL-CDS)
Jr06_13790(Ensembl)	XM_035691047(refSeq)
cds.Jr06_13790_p1(Ensembl_PRO)	LIHL02000006(EMBL)
A0A6P9EF94(Synonym)	Jr06_13790_p1(Ensembl_TRS)
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PANTHER Classification

PANTHER Family:	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER (PTHR11361)
PANTHER Subfamily:	DNA MISMATCH REPAIR PROTEIN MSH2 (PTHR11361:SF35)
PANTHER GO-slim Molecular Function:	double-stranded DNA binding
PANTHER GO-slim Biological Process:	mitotic recombination mismatch repair
PANTHER GO-slim Cellular Component:	nuclear protein-containing complex
PANTHER protein class:	DNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	DNA binding, ATP binding, ATP-dependent DNA damage sensor activity, mismatched DNA binding
GO BP Complete:	DNA repair, mismatch repair, mitotic recombination
GO CC Complete:	nucleus, MutSalpha complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=7325\|UniProtKB=P43246	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000050712.1\|UniProtKB=A0A2I3RPY2	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000007088.3\|UniProtKB=G3QW00	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000000974.4\|UniProtKB=F6ZXY5	Macaca mulatta	LDO
MOUSE\|MGI=MGI=101816\|UniProtKB=P43247	Mus musculus	LDO
RAT\|RGD=620786\|UniProtKB=P54275	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000002742\|UniProtKB=Q3MHE4	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000008428.5\|UniProtKB=F1SQH4	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000010315.4\|UniProtKB=A0A9L0SDG0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000013448.6\|UniProtKB=M3WIV8	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845005364.1\|UniProtKB=A0A8I3MVG3	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000002765.3\|UniProtKB=F6YW13	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000001098.3\|UniProtKB=F7DPM7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000013431.4\|UniProtKB=F7FIJ9	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010017712.1\|UniProtKB=A0A8V0Z2L4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000013917.4\|UniProtKB=G1KPF5	Anolis carolinensis	LDO
XENLA\|Gene=msh2.L\|UniProtKB=A0A1L8G6D6	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-977518\|UniProtKB=A0A8J0QMV2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000010268.2\|UniProtKB=H2M372	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040426-2932\|UniProtKB=Q803R6	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000016301.1\|UniProtKB=W5NHL4	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000006286.3\|UniProtKB=F6UCG0	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118422865\|UniProtKB=A0A9J7LP80	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC589363\|UniProtKB=A0A7M7PI70	Strongylocentrotus purpuratus	LDO
DROME\|FlyBase=FBgn0015546\|UniProtKB=P43248	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP010282\|UniProtKB=A0A1S4H3L1	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC002071\|UniProtKB=D7EIT9	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_325677\|UniProtKB=E9H5Q5	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG190918\|UniProtKB=T1FSF1	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g188431\|UniProtKB=A7SD83	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG56718\|UniProtKB=B3RWE3	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_34327\|UniProtKB=A9VAZ2	Monosiga brevicollis	LDO
YEAST\|SGD=S000005450\|UniProtKB=P25847	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFR603C\|UniProtKB=Q752H0	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000196306\|UniProtKB=Q5A102	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F00154g\|UniProtKB=Q6C3F6	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_10621\|UniProtKB=C8V8L9	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G09850\|UniProtKB=Q4WXK7	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU02230\|UniProtKB=O13396	Neurospora crassa	LDO
PHANO\|EnsemblGenome=SNOG_09508\|UniProtKB=Q0UFF6	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC19G7.01c\|UniProtKB=O74773	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_02226\|UniProtKB=B6K1W3	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNA07480\|UniProtKB=Q5KN74	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_03025\|UniProtKB=A0A0D1DZP4	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_02693\|UniProtKB=E3JW27	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_21067\|UniProtKB=F4PE73	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_123830\|UniProtKB=B1N4L6	Entamoeba histolytica	O
ENTH1\|EnsemblGenome=CL6EHI_172750\|UniProtKB=C4M9J9	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0275809\|UniProtKB=Q553L4	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_50444\|UniProtKB=F0ZYF7	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_300740\|UniProtKB=A2EP54	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0706700\|UniProtKB=C0H4L8	Plasmodium falciparum	O
PLAF7\|EnsemblGenome=PF3D7_1427500\|UniProtKB=Q8ILI9	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00000151001\|UniProtKB=Q6BFM8	Paramecium tetraurelia	LDO
PHYRM\|Gene=H3GTV2_PHYRM\|UniProtKB=H3GTV2	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_01g003463v5\|UniProtKB=A0A2K3E4V1	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00007p00236950\|UniProtKB=W1PBV8	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_180G00240\|UniProtKB=A0A0K9PQT7	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma06_g15000\|UniProtKB=A0A804JGE4	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_021117mg\|UniProtKB=K3Z3J9	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3002G362200\|UniProtKB=C5XD67	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb326520\|UniProtKB=Q9XGC9	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os05g0274200\|UniProtKB=B9FNL5	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g15260v3\|UniProtKB=A0A0Q3GTU8	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0033310\|UniProtKB=F2EIF8	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS1A02G135100\|UniProtKB=A0A3B5XX82	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1B02G149700\|UniProtKB=A0A3B5YUL1	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS1D02G131600\|UniProtKB=A0A3B5ZRD2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_010535\|UniProtKB=A0A1U8ACS8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110789489\|UniProtKB=A0A9R0IIT6	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr05g0223601\|UniProtKB=A0A251UT21	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C500237980\|UniProtKB=A0A9R1XCQ1	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000954mg\|UniProtKB=A0A022PRQ7	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_17612\|UniProtKB=A0A2G2ZC30	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400004071\|UniProtKB=M0ZY09	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc06g069230.3\|UniProtKB=A0A3Q7H0I8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107825761\|UniProtKB=A0A1S4D417	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi17g00373\|UniProtKB=D7SIV1	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_B00700\|UniProtKB=A0A059CZP2	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C03P49490.1\|UniProtKB=A0A078ITW7	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra001709\|UniProtKB=M4CBX9	Brassica campestris	LDO
ARATH\|TAIR=locus=2095097\|UniProtKB=O24617	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107897679\|UniProtKB=A0A1U8IKP3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107888755\|UniProtKB=A0A1U8HQX2	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_012253\|UniProtKB=A0A061FV10	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g002306mg\|UniProtKB=A0A067FAT5	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_012G060000v3\|UniProtKB=B9I2Q3	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_01G020600\|UniProtKB=A0A2C9WH06	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1617850\|UniProtKB=B9RE38	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_17G121400\|UniProtKB=I1MUG2	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g111945\|UniProtKB=A0A072V1T7	Medicago truncatula	LDO
CUCSA\|EnsemblGenome=Csa_1G020900\|UniProtKB=A0A0A0LS02	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G217300\|UniProtKB=M5W984	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_407609\|UniProtKB=D8R658	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_85179\|UniProtKB=D8R655	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_268576\|UniProtKB=D8SGC2	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c22_850\|UniProtKB=A0A2K1ILS8	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0120s0004\|UniProtKB=A0A2R6WA44	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_006260050\|UniProtKB=A0A1Y1ILK0	Klebsormidium nitens	LDO
METAC\|EnsemblGenome=MA_0080\|UniProtKB=Q8TUI7	Methanosarcina acetivorans	O
HALSA\|EnsemblGenome=VNG_2270G\|UniProtKB=Q9HN35	Halobacterium salinarum	O
THEKO\|EnsemblGenome=TK0682\|UniProtKB=Q5JEZ3	Thermococcus kodakaraensis	O
METAC\|EnsemblGenome=MA_0523\|UniProtKB=Q8TTB4	Methanosarcina acetivorans	O
HALSA\|EnsemblGenome=VNG_0163G\|UniProtKB=Q9HSM2	Halobacterium salinarum	O
HALSA\|EnsemblGenome=VNG_0172G\|UniProtKB=Q9HSL6	Halobacterium salinarum	O
CLOBH\|Gene_OrderedLocusName=CBO1986\|UniProtKB=A5I3B1	Clostridium botulinum	O
STAA8\|EnsemblGenome=SAOUHSC_02276\|UniProtKB=Q2FWL3	Staphylococcus aureus	O
CLOBH\|Gene_OrderedLocusName=CBO1507\|UniProtKB=A5I1Y5	Clostridium botulinum	O
GLOVI\|Gene=Q7NE77_GLOVI\|UniProtKB=Q7NE77	Gloeobacter violaceus	O
LEPIN\|EnsemblGenome=LA_4236\|UniProtKB=Q8EYH8	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_2697\|UniProtKB=Q8A4A6	Bacteroides thetaiotaomicron	O
RHOBA\|EnsemblGenome=RB9979\|UniProtKB=Q7UKS4	Rhodopirellula baltica	O
CHLAA\|EnsemblGenome=Caur_0339\|UniProtKB=A9WD21	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_0340\|UniProtKB=A9WD22	Chloroflexus aurantiacus	O
CHLAA\|EnsemblGenome=Caur_2954\|UniProtKB=A9WFZ9	Chloroflexus aurantiacus	O
CLOBH\|Gene_OrderedLocusName=CBO1800\|UniProtKB=A5I2S2	Clostridium botulinum	O
STRR6\|EnsemblGenome=spr1888\|UniProtKB=P0A3R4	Streptococcus pneumoniae	O
STAA8\|EnsemblGenome=SAOUHSC_01272\|UniProtKB=Q2FYZ9	Staphylococcus aureus	O
LISMO\|EnsemblGenome=CAC99481\|UniProtKB=Q8Y789	Listeria monocytogenes	O
BACSU\|EnsemblGenome=BSU_17040\|UniProtKB=P49849	Bacillus subtilis	O
BACCR\|EnsemblGenome=BC_3769\|UniProtKB=Q81A25	Bacillus cereus	O
THEMA\|EnsemblGenome=TM_1719\|UniProtKB=P74926	Thermotoga maritima	O
GLOVI\|EnsemblGenome=BAC88974\|UniProtKB=Q7NLT8	Gloeobacter violaceus	O
SYNY3\|EnsemblGenome=BAA17821\|UniProtKB=P73769	Synechocystis	O
LEPIN\|EnsemblGenome=LA_2146\|UniProtKB=Q8F496	Leptospira interrogans	O
BACTN\|EnsemblGenome=BT_3121\|UniProtKB=Q8A334	Bacteroides thetaiotaomicron	O
CHLTR\|EnsemblGenome=CT_792\|UniProtKB=O84797	Chlamydia trachomatis	O
RHOBA\|EnsemblGenome=RB7237\|UniProtKB=Q7UP05	Rhodopirellula baltica	O
AQUAE\|EnsemblGenome=aq_308\|UniProtKB=O66652	Aquifex aeolicus	O
THEYD\|EnsemblGenome=THEYE_A0706\|UniProtKB=B5YJY3	Thermodesulfovibrio yellowstonii	O
DICTD\|EnsemblGenome=Dtur_1077\|UniProtKB=B8E279	Dictyoglomus turgidum	O
FUSNN\|EnsemblGenome=FN0693\|UniProtKB=Q8RFK2	Fusobacterium nucleatum	O
NEIMB\|EnsemblGenome=NMB2160\|UniProtKB=Q9JX94	Neisseria meningitidis serogroup b	O
GEOSL\|EnsemblGenome=GSU1822\|UniProtKB=P61667	Geobacter sulfurreducens	O
BRADU\|EnsemblGenome=BAC46189\|UniProtKB=Q89VX1	Bradyrhizobium diazoefficiens	O
COXBU\|EnsemblGenome=CBU_1056\|UniProtKB=Q83CQ2	Coxiella burnetii	O
HAEIN\|EnsemblGenome=HI_0707\|UniProtKB=P44834	Haemophilus influenzae	O
SHEON\|Gene_OrderedLocusName=SO_3431\|UniProtKB=Q8EBR9	Shewanella oneidensis	O
VIBCH\|EnsemblGenome=VC_0535\|UniProtKB=Q9KUI6	Vibrio cholerae	O
XANCP\|EnsemblGenome=XCC1207\|UniProtKB=Q8PBB5	Xanthomonas campestris	O
PSEAE\|EnsemblGenome=PA3620\|UniProtKB=Q9HY08	Pseudomonas aeruginosa	O
SALTY\|EnsemblGenome=STM2909\|UniProtKB=P0A1Y0	Salmonella typhimurium	O
YERPE\|EnsemblGenome=YP_0333\|UniProtKB=Q8ZBQ3	Yersinia pestis	O
ECOLI\|EnsemblGenome=BAE76810\|UniProtKB=P23909	Escherichia coli	O