PANTHER Gene Information

Gene Symbol(s):

25496960

Organism:

Medicago truncatula

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Gene Name:

RNA-dependent RNA polymerase

Gene ID:

MTR_6g088660

Protein ID:

A0A072UCK4

Persistent Id:

PTN004603873

Alternate Ids:

PSQE01000006(EMBL)	MTR_6g088660(Ensembl)
A0A072UCK4(Synonym)	RHN53015(EMBL-CDS)
A0A072UCK4_MEDTR(UniProtKB-ID)	25496960(GeneID)
657383490(GI)	XM_013597709(refSeq)
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PANTHER Classification

PANTHER Family:	RNA-DEPENDENT RNA POLYMERASE (PTHR23079)
PANTHER Subfamily:	RNA-DIRECTED RNA POLYMERASE (PTHR23079:SF55)
PANTHER GO-slim Molecular Function:	5'-3' RNA polymerase activity
PANTHER GO-slim Biological Process:	siRNA processing
PANTHER GO-slim Cellular Component:	nuclear protein-containing complex RNA polymerase complex
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, RNA-dependent RNA polymerase activity
GO BP Complete:	RNA-templated transcription, regulatory ncRNA-mediated gene silencing, siRNA processing
GO CC Complete:	nuclear RNA-directed RNA polymerase complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BRAFL\|Gene=LOC118427356\|UniProtKB=A0A9J7M486	Branchiostoma floridae	LDO
BRAFL\|Gene=LOC118420943\|UniProtKB=A0A9J7MXQ8	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428502\|UniProtKB=A0A9J7M4A9	Branchiostoma floridae	O
BRAFL\|Gene=LOC118429714\|UniProtKB=A0A9J7M7H1	Branchiostoma floridae	O
BRAFL\|Gene=LOC118428503\|UniProtKB=A0A9J7M4B0	Branchiostoma floridae	O
CAEEL\|WormBase=WBGene00004510\|UniProtKB=G5EE53	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG00730\|UniProtKB=A8WN72	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304839\|UniProtKB=A0A8R1V5S9	Pristionchus pacificus	LDO
CAEEL\|WormBase=WBGene00004509\|UniProtKB=G5EFA8	Caenorhabditis elegans	O
CAEEL\|WormBase=WBGene00004508\|UniProtKB=G5ECM1	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG19448\|UniProtKB=A8XVP2	Caenorhabditis briggsae	O
CAEEL\|WormBase=WBGene00001214\|UniProtKB=G5EBQ3	Caenorhabditis elegans	O
CAEBR\|Gene_ORFName=CBG00321\|UniProtKB=A8WMP9	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00098113\|UniProtKB=A0A2A6BLL4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00274061\|UniProtKB=A0A2A6BLU4	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00283817\|UniProtKB=A0A2A6CUJ9	Pristionchus pacificus	O
PRIPA\|EnsemblGenome=WBGene00271994\|UniProtKB=A0A2A6BNW3	Pristionchus pacificus	O
IXOSC\|EnsemblGenome=ISCW001005\|UniProtKB=B7P6P3	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008905\|UniProtKB=B7Q238	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW008904\|UniProtKB=B7Q237	Ixodes scapularis	LDO
ASPFU\|EnsemblGenome=AFUA_5G09430\|UniProtKB=Q4WUR8	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU07534\|UniProtKB=Q1K6C4	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_03377\|UniProtKB=A7EDI7	Sclerotinia sclerotiorum	O
EMENI\|EnsemblGenome=ANIA_02717\|UniProtKB=Q5B9R3	Emericella nidulans	O
NEUCR\|EnsemblGenome=NCU08435\|UniProtKB=Q1K8P0	Neurospora crassa	O
SCLS1\|Gene_ORFName=SS1G_09915\|UniProtKB=A7EX56	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_15784\|UniProtKB=Q0TXM0	Phaeosphaeria nodorum	O
EMENI\|EnsemblGenome=ANIA_04790\|UniProtKB=C8VAM8	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G06790\|UniProtKB=Q4WWR4	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU02178\|UniProtKB=Q1K907	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_13161\|UniProtKB=A7F6D2	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_01986\|UniProtKB=Q0V1X8	Phaeosphaeria nodorum	O
PHANO\|EnsemblGenome=SNOG_14810\|UniProtKB=Q0TZW2	Phaeosphaeria nodorum	O
PHANO\|Gene_ORFName=SNOG_00237\|UniProtKB=Q0V6X7	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC6F12.09\|UniProtKB=O14227	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_03356\|UniProtKB=B6K409	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNG01230\|UniProtKB=Q5KEA1	Cryptococcus neoformans	LDO
PUCGT\|EnsemblGenome=PGTG_17766\|UniProtKB=E3L5E1	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_20838\|UniProtKB=H6QPF7	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_02834\|UniProtKB=E3JWG8	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_05092\|UniProtKB=E3K6D6	Puccinia graminis	LDO
PUCGT\|EnsemblGenome=PGTG_09533\|UniProtKB=E3KHP5	Puccinia graminis	O
ENTH1\|EnsemblGenome=CL6EHI_139420\|UniProtKB=C4M6W7	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0280963\|UniProtKB=Q54UI6	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_149105\|UniProtKB=F0ZCV1	Dictyostelium purpureum	LDO
DICDI\|dictyBase=DDB_G0289659\|UniProtKB=Q54H25	Dictyostelium discoideum	O
DICDI\|dictyBase=DDB_G0291249\|UniProtKB=Q54EH7	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_54684\|UniProtKB=F0ZI81	Dictyostelium purpureum	O
GIAIC\|EnsemblGenome=GL50803_102515\|UniProtKB=E2RTV4	Giardia intestinalis	LDO
PARTE\|EnsemblGenome=GSPATT00018564001\|UniProtKB=A0DMU3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00006401001\|UniProtKB=Q3SE69	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00024768001\|UniProtKB=Q3SE67	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00036857001\|UniProtKB=A0CBA7	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_22277\|UniProtKB=B8BZF0	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_5028\|UniProtKB=B8C1R8	Thalassiosira pseudonana	LDO
AMBTC\|EnsemblGenome=AMTR_s00056p00110240\|UniProtKB=U5D169	Amborella trichopoda	LDO
MUSAM\|EnsemblGenome=Ma10_g00630\|UniProtKB=A0A804KR42	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_000292mg\|UniProtKB=K3XEH5	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G016700\|UniProtKB=A0A1Z5RBK3	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3003G029800\|UniProtKB=C5XLU8	Sorghum bicolor	LDO
ORYSJ\|Gene_OrderedLocusName=LOC_Os01g10140\|UniProtKB=Q5QMN4	Oryza sativa	O
ORYSJ\|Gene_OrderedLocusName=LOC_Os01g10130\|UniProtKB=Q5QMN5	Oryza sativa	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0244380\|UniProtKB=A0A8I6WXV7	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3B02G160700\|UniProtKB=A0A3B6FIH7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G311500\|UniProtKB=A0A3B6ENG7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G143000\|UniProtKB=A0A3B6GQK9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G278900\|UniProtKB=A0A3B6SJR4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G160900\|UniProtKB=A0A3B6FMC2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G311300\|UniProtKB=A0A3B6EJF2	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_002842\|UniProtKB=A0A1U8Q2W0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110779950\|UniProtKB=A0A9R0HZP9	Spinacia oleracea	O
SPIOL\|Gene=LOC110788258\|UniProtKB=A0A9R0IFV7	Spinacia oleracea	O
SPIOL\|Gene=LOC110788261\|UniProtKB=A0A9R0IG82	Spinacia oleracea	O
SPIOL\|Gene=LOC110788260\|UniProtKB=A0A9R0JVG1	Spinacia oleracea	LDO
SPIOL\|Gene=LOC110788257\|UniProtKB=A0A9R0IH86	Spinacia oleracea	O
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0739571\|UniProtKB=A0A251RY30	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C800427290\|UniProtKB=A0A9R1UVA9	Lactuca sativa	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr10g0464941\|UniProtKB=A0A251RWY7	Helianthus annuus	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr10g0464911\|UniProtKB=A0A9K3I0X7	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C500281780\|UniProtKB=A0A9R1VP90	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a001145mg\|UniProtKB=A0A022QPT4	Erythranthe guttata	LDO
SOLLC\|EnsemblGenome=Solyc12g008420.2\|UniProtKB=A0A3Q7J3B9	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107774542\|UniProtKB=A0A1S3YBJ3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107796049\|UniProtKB=A0A1S4AC53	Nicotiana tabacum	LDO
CAPAN\|EnsemblGenome=T459_21399\|UniProtKB=A0A2G2YWJ9	Capsicum annuum	O
SOLLC\|EnsemblGenome=Solyc06g051190.2\|UniProtKB=A0A3Q7GVL9	Solanum lycopersicum	O
TOBAC\|Gene=LOC107778920\|UniProtKB=A0A1S3YRQ6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107828996\|UniProtKB=A0A1S4DEK3	Nicotiana tabacum	O
VITVI\|EnsemblGenome=Vitvi11g00273\|UniProtKB=D7TBH5	Vitis vinifera	LDO
BRANA\|Gene_ORFName=DARMORV10_A10P17220.1\|UniProtKB=A0A078GYQ0	Brassica napus	O
BRACM\|EnsemblGenome=Bra002514\|UniProtKB=M4CE83	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00078343001\|UniProtKB=A0A078FL86	Brassica napus	O
BRACM\|EnsemblGenome=Bra031107\|UniProtKB=M4EQN4	Brassica campestris	O
ARATH\|TAIR=locus=2052030\|UniProtKB=O82189	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2052040\|UniProtKB=O82190	Arabidopsis thaliana	O
BRANA\|Gene_ORFName=GSBRNA2T00059458001\|UniProtKB=A0A078HBY4	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00059455001\|UniProtKB=A0A078HDL3	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00059451001\|UniProtKB=A0A078HGD6	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra039030\|UniProtKB=M4FD60	Brassica campestris	LDO
ARATH\|TAIR=locus=2052020\|UniProtKB=O82188	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107932268\|UniProtKB=A0A1U8LYT1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107940156\|UniProtKB=A0A1U8MQE9	Gossypium hirsutum	LDO
CITSI\|Gene_ORFName=CISIN_1g001771mg\|UniProtKB=A0A067FTJ1	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_007G081300v3\|UniProtKB=A0A2K1ZR45	Populus trichocarpa	O
POPTR\|Gene_ORFName=POPTR_006G164400\|UniProtKB=A0A3N7FA73	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_16G110000\|UniProtKB=A0A2C9UAR2	Manihot esculenta	LDO
SOYBN\|EnsemblGenome=GLYMA_01G008700\|UniProtKB=K7K152	Glycine max	LDO
JUGRE\|EnsemblGenome=Jr01_27830\|UniProtKB=A0A2I4E8G8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_1G574860\|UniProtKB=A0A0A0LYP8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G221200\|UniProtKB=A0A251NF96	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_413790\|UniProtKB=D8RQ81	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_431698\|UniProtKB=D8TDH3	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c5_20740\|UniProtKB=A0A2K1KKF6	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c6_8520\|UniProtKB=A0A2K1KEU8	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0048s0033\|UniProtKB=A0A2R6WYH4	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000520030\|UniProtKB=A0A1Y1HNV7	Klebsormidium nitens	LDO