PANTHER Gene Information

Gene Symbol(s):

LOC_Os03g29470

Organism:

Oryza sativa

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Gene Name:

Os03g0408500 protein

Gene ID:

Os03g0408500

Protein ID:

Q10JT5

Persistent Id:

PTN000249410

Alternate Ids:

1002247564(GI)	DP000009(EMBL)
Q10JT5(Synonym)	4333084(GeneID)
Os03g0408500(Ensembl)	ABF96541(EMBL-CDS)
XP_015627953(refSeq)	Q10JT5_ORYSJ(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR (PTHR48068)
PANTHER Subfamily:	TATA-BOX BINDING PROTEIN ASSOCIATED FACTOR 9 (PTHR48068:SF4)
PANTHER GO-slim Molecular Function:	transcription coactivator activity
PANTHER GO-slim Biological Process:	RNA polymerase II preinitiation complex assembly
PANTHER GO-slim Cellular Component:	SAGA complex transcription factor TFIID complex
PANTHER protein class:

Pathway Categories:

General transcription regulation

TBP-associated factors

Transcription regulation by bZIP transcription factor

TBP-associated factors

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	translation initiation factor activity, transcription coactivator activity, protein heterodimerization activity, RNA polymerase II general transcription initiation factor activity
GO BP Complete:	RNA polymerase II preinitiation complex assembly, positive regulation of DNA-templated transcription, DNA-templated transcription initiation, translational initiation
GO CC Complete:	nucleus, transcription factor TFIID complex, SAGA complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000047793.1\|UniProtKB=A0A2I3SGW3	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000041098.1\|UniProtKB=A0A2I2Z2P7	Gorilla gorilla gorilla	O
HUMAN\|HGNC=17306\|UniProtKB=Q9HBM6	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000022053.3\|UniProtKB=H2R4N5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000002470.3\|UniProtKB=G3QJ49	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000012875.4\|UniProtKB=F6SFX7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=3039562\|UniProtKB=Q6NZA9	Mus musculus	LDO
RAT\|RGD=621116\|UniProtKB=Q62880	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000000895.6\|UniProtKB=G3MWV4	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005010431.1\|UniProtKB=I3LFP6	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000010189.4\|UniProtKB=A0A3Q2LLD6	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000025493.4\|UniProtKB=M3XBV4	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845020868.1\|UniProtKB=A0A8I3P616	Canis lupus familiaris	LDO
PANTR\|Ensembl=ENSPTRG00000052821.1\|UniProtKB=A0A2I3TFQ0	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000025255.2\|UniProtKB=A0A2I2ZU96	Gorilla gorilla gorilla	O
HUMAN\|HGNC=11542\|UniProtKB=Q16594	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000052212.1\|UniProtKB=A0A2I3T3P3	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000004126.3\|UniProtKB=G3QND7	Gorilla gorilla gorilla	LDO
MOUSE\|MGI=MGI=1888697\|UniProtKB=Q8VI33	Mus musculus	LDO
RAT\|RGD=727861\|UniProtKB=Q5BKE0	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000027980\|UniProtKB=Q17QQ4	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000038615.3\|UniProtKB=A0A287AFL9	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000056130.1\|UniProtKB=A0A9L0TU70	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000031227.4\|UniProtKB=A0A5F5XKK0	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845005544.1\|UniProtKB=A0A8I3NBW8	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845016663.1\|UniProtKB=A0A8I3RZF2	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845012450.1\|UniProtKB=A0A8I3RX25	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000041581.1\|UniProtKB=A0A5F8HLA6	Monodelphis domestica	O
MONDO\|Ensembl=ENSMODG00000004077.3\|UniProtKB=F6VW37	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000042180.1\|UniProtKB=A0A6I8PLW2	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010017780.1\|UniProtKB=A0A8V0ZAG4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000004688.4\|UniProtKB=A0A803TK00	Anolis carolinensis	LDO
XENLA\|Gene=taf9b.L\|UniProtKB=Q641A8	Xenopus laevis	O
XENLA\|Gene=taf9b.S\|UniProtKB=Q05AU0	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-973353\|UniProtKB=F6UGW7	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000013076.2\|UniProtKB=H2MCU9	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-204\|UniProtKB=F1QDT4	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000013708.1\|UniProtKB=W5N8E1	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000013825.2\|UniProtKB=F6QLU5	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118416684\|UniProtKB=A0A9J7L802	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC581784\|UniProtKB=A0A7M7NJ43	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00006391\|UniProtKB=O45784	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00037702\|UniProtKB=A8XS90	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00097815\|UniProtKB=A0A2A6CEJ0	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0000617\|UniProtKB=Q27272	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003094\|UniProtKB=Q7QBM3	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC004292\|UniProtKB=D7EL47	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_303843\|UniProtKB=E9GIC2	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW002952\|UniProtKB=B7PCK9	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW012450\|UniProtKB=B7QAZ8	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG175703\|UniProtKB=T1F9J6	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g90512\|UniProtKB=A7RR68	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG7341\|UniProtKB=B3RUC6	Trichoplax adhaerens	LDO
YEAST\|SGD=S000004849\|UniProtKB=Q05027	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AFR527W\|UniProtKB=Q752P6	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000191045\|UniProtKB=A0A1D8PNT2	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E23133g\|UniProtKB=Q6C4W7	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_00794\|UniProtKB=Q5BF86	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_1G14600\|UniProtKB=Q4WRZ1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU03138\|UniProtKB=Q7SDV2	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_12270\|UniProtKB=A7F2X2	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_14252\|UniProtKB=Q0U291	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC12G12.05c\|UniProtKB=Q09869	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_01475\|UniProtKB=B6JY17	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNK01010\|UniProtKB=Q5K9R7	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06387\|UniProtKB=A0A0D1DNQ9	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_13615\|UniProtKB=E3KT01	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_02205\|UniProtKB=E3JXG9	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_7075\|UniProtKB=F4P4F0	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=EHI_095080\|UniProtKB=C4M4S1	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0272360\|UniProtKB=Q55A39	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_11902\|UniProtKB=F0ZC88	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_149520\|UniProtKB=A2ELL9	Trichomonas vaginalis	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_21165\|UniProtKB=B8BTN6	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3HBI0_PHYRM\|UniProtKB=H3HBI0	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_07g353350v5\|UniProtKB=A8JFR8	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00024p00240490\|UniProtKB=W1PUB7	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_477G00170\|UniProtKB=A0A0K9P232	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_34G00180\|UniProtKB=A0A0K9P927	Zostera marina	LDO
ZOSMR\|Gene_ORFName=ZOSMA_69G00780\|UniProtKB=A0A0K9NTU7	Zostera marina	O
MUSAM\|EnsemblGenome=Ma10_g25820\|UniProtKB=A0A804L0E2	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma07_g11190\|UniProtKB=A0A804JUL9	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_037367mg\|UniProtKB=K4AER0	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G341500\|UniProtKB=C5WWP0	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb392970\|UniProtKB=B6TMH7	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb019630\|UniProtKB=B4FAS0	Zea mays	LDO
BRADI\|EnsemblGenome=BRADI_1g60150v3\|UniProtKB=I1H4N9	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_4g28410v3\|UniProtKB=I1IPH4	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0125890\|UniProtKB=A0A8I6WYT9	Hordeum vulgare subsp. vulgare	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0316280\|UniProtKB=F2CXI7	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS3B02G516000\|UniProtKB=A0A3B6FZZ7	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G468500\|UniProtKB=A0A3B6H5J0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G472800\|UniProtKB=A0A3B6ER22	Triticum aestivum	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0297940\|UniProtKB=F2EJL9	Hordeum vulgare subsp. vulgare	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.3HG0298020\|UniProtKB=F2EEY8	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS3A02G387000\|UniProtKB=A0A3B6ERA0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G421800\|UniProtKB=A0A077S5E8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G445300\|UniProtKB=A0A3B6FUG2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G382100\|UniProtKB=A0A3B6GXW8	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G386900\|UniProtKB=A0A3B6EPB5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G406000\|UniProtKB=A0A3B6H3J2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G386800\|UniProtKB=A0A3B6EM86	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G382300\|UniProtKB=A0A3B6GZ32	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G421900\|UniProtKB=A0A3B6FXL5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3D02G382200\|UniProtKB=A0A3B6H2A9	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G422000\|UniProtKB=A0A077S629	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G421700\|UniProtKB=A0A3B6FT76	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3A02G387200\|UniProtKB=A0A3B6ELU4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G421600\|UniProtKB=A0A3B6FU83	Triticum aestivum	O
NELNU\|Gene=LOC104594523\|UniProtKB=A0A1U7ZX57	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110796719\|UniProtKB=A0A9R0K3V5	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0641311\|UniProtKB=A0A251SGY5	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0781371\|UniProtKB=A0A9K3GSE6	Helianthus annuus	O
HELAN\|Gene_ORFName=HanXRQr2_Chr09g0394821\|UniProtKB=A0A9K3I707	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400187180\|UniProtKB=A0A9R1XKK2	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014632mg\|UniProtKB=A0A022PY97	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_13890\|UniProtKB=A0A1U8GVQ5	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400011493\|UniProtKB=M1ATJ3	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc04g010090.3\|UniProtKB=A0A3Q7FZ83	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107831428\|UniProtKB=A0A1S4DNE2	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107810036\|UniProtKB=A0A1S4BMX8	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi09g00094\|UniProtKB=D7TZS0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_H02488\|UniProtKB=A0A059B0G9	Eucalyptus grandis	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_J01267\|UniProtKB=A0A059ADB4	Eucalyptus grandis	O
EUCGR\|EnsemblGenome=EUGRSUZ_G03389\|UniProtKB=A0A059BJA3	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C06P15670.1\|UniProtKB=A0A078GLM4	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00053732001\|UniProtKB=A0A078H5G1	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_C03P92020.1\|UniProtKB=A0A078J326	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra030901\|UniProtKB=A0A397YE35	Brassica campestris	LDO
ARATH\|TAIR=locus=2014350\|UniProtKB=Q9SYH2	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107897431\|UniProtKB=A0A1U8IJT5	Gossypium hirsutum	LDO
GOSHI\|Gene=LOC107913866\|UniProtKB=A0A1U8K6B8	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_029140\|UniProtKB=A0A061GJL0	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g030559mg\|UniProtKB=A0A067FCF8	Citrus sinensis	O
CITSI\|Gene_ORFName=CISIN_1g028993mg\|UniProtKB=A0A067EQ58	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_001G168300v3\|UniProtKB=B9GKT8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_04G145400\|UniProtKB=A0A2C9W4Q6	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_11G019600\|UniProtKB=A0A2C9UX71	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0652310\|UniProtKB=B9S5Q3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_02G277500\|UniProtKB=I1JIU9	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_17G037200\|UniProtKB=C6SYR1	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_07G236200\|UniProtKB=C6T507	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_4g123000\|UniProtKB=A0A072V2Q4	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_6g027990\|UniProtKB=A0A072U741	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_3g015130\|UniProtKB=G7IVW0	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr12_17170\|UniProtKB=A0A2I4HX27	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr07_27480\|UniProtKB=A0A2I4FTU8	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_7G449470\|UniProtKB=A0A0A0KAU5	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G039800\|UniProtKB=M5WR37	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_58985\|UniProtKB=D8R9T7	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c19_19770\|UniProtKB=A0A2K1IZ21	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0152s0015\|UniProtKB=A0A2R6W4W3	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000550290\|UniProtKB=A0A1Y1HTJ5	Klebsormidium nitens	LDO