PANTHER Gene Information

Gene Symbol(s):

PHYPA_017417

Organism:

Physcomitrella patens

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Tree

Gene Name:

Plastid ribosomal protein L4 large ribosomal subunit

Gene ID:

Pp3c13_15330

Protein ID:

A9T3B9

Persistent Id:

PTN000844135

Alternate Ids:

ABEU02000013(EMBL)	A9T3B9(Synonym)
Pp3c13_15330(Ensembl)	PNR42587(EMBL-CDS)
XP_001773052(refSeq)	168041144(GI)
A9T3B9_PHYPA(UniProtKB-ID)
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PANTHER Classification

PANTHER Family:	50S RIBOSOMAL PROTEIN L4 (PTHR10746)
PANTHER Subfamily:	LARGE RIBOSOMAL SUBUNIT PROTEIN UL4M (PTHR10746:SF6)
PANTHER GO-slim Molecular Function:	structural constituent of ribosome
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	structural constituent of ribosome, mRNA binding
GO BP Complete:	translation
GO CC Complete:	ribosome, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=14276\|UniProtKB=Q9BYD3	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000010462.6\|UniProtKB=A0A2I3TDT9	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000036529.1\|UniProtKB=A0A2I2ZXB9	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000001219.4\|UniProtKB=A0A5F7ZRV7	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2137210\|UniProtKB=Q9DCU6	Mus musculus	LDO
RAT\|RGD=1311777\|UniProtKB=D4A131	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000001419\|UniProtKB=Q32PI6	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000013656.5\|UniProtKB=A0A287B2W3	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000017013.4\|UniProtKB=F6WYA2	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000043071.2\|UniProtKB=A0A5F5XL71	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845028082.1\|UniProtKB=A0A8I3QHV4	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000005476.4\|UniProtKB=F7CG27	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000045427.1\|UniProtKB=A0A6I8N5N7	Ornithorhynchus anatinus	LDO
ANOCA\|Ensembl=ENSACAG00000008232.4\|UniProtKB=H9GDL9	Anolis carolinensis	LDO
XENLA\|Gene=mrpl4.L\|UniProtKB=A9JS31	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1001754\|UniProtKB=A0A8J0SBD9	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000000085.2\|UniProtKB=H2L302	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-050522-388\|UniProtKB=Q503X2	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000016632.1\|UniProtKB=W5NIT6	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000003144.3\|UniProtKB=F6R725	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118413293\|UniProtKB=A0A9J7KZB5	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC588169\|UniProtKB=A0A7M7PQ82	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00020717\|UniProtKB=O17005	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00024747\|UniProtKB=A8WQH6	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0001995\|UniProtKB=Q9V3D0	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP007937\|UniProtKB=A0A1S4GWR2	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC011518\|UniProtKB=D6W6E1	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_52198\|UniProtKB=E9GLC0	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW020778\|UniProtKB=B7PXQ8	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW016414\|UniProtKB=B7P338	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG101733\|UniProtKB=T1ED65	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g238704\|UniProtKB=A7RJ96	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG27010\|UniProtKB=B3S0W8	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_6699\|UniProtKB=A9UV13	Monosiga brevicollis	LDO
YEAST\|SGD=S000004487\|UniProtKB=P51998	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AER316C\|UniProtKB=Q756E9	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000188564\|UniProtKB=A0A1D8PQQ9	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E20493g\|UniProtKB=Q6C573	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_06843\|UniProtKB=C8V2I4	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_5G12800\|UniProtKB=Q4WVP1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU01474\|UniProtKB=V5IPE9	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_03249\|UniProtKB=A7ED59	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_16116\|UniProtKB=Q0TWI7	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPBC2D10.08c\|UniProtKB=O74801	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_03649\|UniProtKB=B6K4T6	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNB02740\|UniProtKB=Q5KM69	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_00435\|UniProtKB=A0A0D1D0T3	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_01180\|UniProtKB=E3JUX4	Puccinia graminis	LDO
DICDI\|dictyBase=DDB_G0283275\|UniProtKB=Q54RB5	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_149944\|UniProtKB=F0ZF24	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_11_1360\|UniProtKB=Q4QGU6	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb11.02.3810\|UniProtKB=Q385G8	Trypanosoma brucei	LDO
PLAF7\|Gene_ORFName=PF3D7_API01300\|UniProtKB=Q25805	Plasmodium falciparum	O
PLAF7\|EnsemblGenome=PF3D7_0822000\|UniProtKB=Q8IB54	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00019907001\|UniProtKB=A0DT47	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00009437001\|UniProtKB=A0CQM2	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_261661\|UniProtKB=B8BX09	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GHB9_PHYRM\|UniProtKB=H3GHB9	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g520400v5\|UniProtKB=A0A2K3D422	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00101p00151570\|UniProtKB=W1NWR6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_15G00140\|UniProtKB=A0A0K9PWS5	Zostera marina	O
ZOSMR\|Gene_ORFName=ZOSMA_179G00080\|UniProtKB=A0A0K9PTL8	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g20980\|UniProtKB=A0A804JY16	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_023304mg\|UniProtKB=K3Z9T3	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_026705mg\|UniProtKB=K3ZJF2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3006G056600\|UniProtKB=C5YEX6	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3001G050700\|UniProtKB=A0A1Z5S4F1	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb061360\|UniProtKB=A0A1D6L861	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os11g0585700\|UniProtKB=Q2R1Z9	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_4g15150v3\|UniProtKB=I1IKT8	Brachypodium distachyon	LDO
WHEAT\|EnsemblGenome=TraesCSU02G122900\|UniProtKB=A0A3B6U6K2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G074600\|UniProtKB=A0A3B6NJ20	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5D02G246400\|UniProtKB=A0A3B6MT29	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5A02G239300\|UniProtKB=A0A3B6KGX6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS5B02G237900\|UniProtKB=A0A3B6LN11	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G099200\|UniProtKB=A0A3B6PIN9	Triticum aestivum	LDO
NELNU\|Gene=LOC104594085\|UniProtKB=A0A1U7ZLC0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110779002\|UniProtKB=A0A9R0HYJ6	Spinacia oleracea	LDO
SPIOL\|Gene=LOC110803586\|UniProtKB=A0A9R0KBU7	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0757061\|UniProtKB=A0A251VQM8	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400177320\|UniProtKB=A0A9R1XK93	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a014658mg\|UniProtKB=A0A022QRL1	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a010625mg\|UniProtKB=A0A022Q8W6	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a010848mg\|UniProtKB=A0A022R9B8	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_30835\|UniProtKB=A0A2G2Y9J5	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400015407\|UniProtKB=M1B8V4	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc12g088730.2\|UniProtKB=A0A3Q7JXX8	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107794981\|UniProtKB=A0A1S4A8Q6	Nicotiana tabacum	O
TOBAC\|Gene=LOC107762007\|UniProtKB=A0A1S3X7E1	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi10g00123\|UniProtKB=D7TR72	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_G00454\|UniProtKB=A0A059BB18	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_A07P00590.1\|UniProtKB=A0A078H3K6	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00078339001\|UniProtKB=A0A078FLM2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra031109\|UniProtKB=M4EQN6	Brassica campestris	LDO
ARATH\|TAIR=locus=2061659\|UniProtKB=Q8VY61	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107905905\|UniProtKB=A0A1U8JD09	Gossypium hirsutum	O
GOSHI\|Gene=LOC107958294\|UniProtKB=A0A1U8PH21	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_030301\|UniProtKB=A0A061GHC5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g021591mg\|UniProtKB=A0A067GSQ6	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_004G004800v3\|UniProtKB=A0A2K2AN27	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_16G003100\|UniProtKB=A0A2C9U8E5	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_0903300\|UniProtKB=B9RXF3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_09G007300\|UniProtKB=I1KZW0	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_15G111700\|UniProtKB=K7MAT5	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_3g107920\|UniProtKB=G7JBP6	Medicago truncatula	LDO
JUGRE\|Gene=LOC109008560\|UniProtKB=A0A6P9E9W7	Juglans regia	O
JUGRE\|EnsemblGenome=Jr04_13710\|UniProtKB=A0A2I4DMB4	Juglans regia	O
JUGRE\|EnsemblGenome=Jr03_11790\|UniProtKB=A0A2I4GK19	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G513440\|UniProtKB=A0A0A0KH99	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_4G015300\|UniProtKB=A0A251PE58	Prunus persica	O
PRUPE\|EnsemblGenome=PRUPE_2G035900\|UniProtKB=A0A251QAI4	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_227946\|UniProtKB=D8RG41	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_181558\|UniProtKB=D8SPI6	Selaginella moellendorffii	LDO
MARPO\|EnsemblGenome=MARPO_0162s0019\|UniProtKB=A0A2R6W3T1	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_008520020\|UniProtKB=A0A1Y1ISM7	Klebsormidium nitens	LDO
CHLAA\|EnsemblGenome=Caur_2370\|UniProtKB=A9WH67	Chloroflexus aurantiacus	LDO
STRCO\|Gene_OrderedLocusName=SCO4703\|UniProtKB=Q9L0D9	Streptomyces coelicolor	LDO
MYCTU\|Gene_OrderedLocusName=Rv0702\|UniProtKB=P9WH85	Mycobacterium tuberculosis	LDO
MYCGE\|EnsemblGenome=MG_152\|UniProtKB=P47398	mycoplasma genitalium	LDO
CLOBH\|Gene_OrderedLocusName=CBO3479\|UniProtKB=A5I7K5	Clostridium botulinum	LDO
STRR6\|EnsemblGenome=spr0189\|UniProtKB=Q8CWV7	Streptococcus pneumoniae	LDO
STAA8\|EnsemblGenome=SAOUHSC_02511\|UniProtKB=Q2FW07	Staphylococcus aureus	LDO
LISMO\|EnsemblGenome=CAD00709\|UniProtKB=P61055	Listeria monocytogenes	LDO
BACSU\|EnsemblGenome=BSU_01170\|UniProtKB=P42921	Bacillus subtilis	LDO
BACCR\|EnsemblGenome=BC_0132\|UniProtKB=Q81J41	Bacillus cereus	LDO
THEMA\|EnsemblGenome=TM_1499\|UniProtKB=P38516	Thermotoga maritima	LDO
DEIRA\|EnsemblGenome=DR_0312\|UniProtKB=Q9RXK1	Deinococcus radiodurans	LDO
LEPIN\|EnsemblGenome=LA_0740\|UniProtKB=Q9XD35	Leptospira interrogans	LDO
BACTN\|EnsemblGenome=BT_2726\|UniProtKB=Q8A477	Bacteroides thetaiotaomicron	LDO
CHLTR\|EnsemblGenome=CT_527\|UniProtKB=O84532	Chlamydia trachomatis	LDO
RHOBA\|EnsemblGenome=RB7834\|UniProtKB=Q7UN19	Rhodopirellula baltica	LDO
AQUAE\|EnsemblGenome=aq_011\|UniProtKB=O66432	Aquifex aeolicus	LDO
THEYD\|EnsemblGenome=THEYE_A1445\|UniProtKB=B5YG46	Thermodesulfovibrio yellowstonii	LDO
DICTD\|EnsemblGenome=Dtur_0982\|UniProtKB=B8E1D4	Dictyoglomus turgidum	LDO
FUSNN\|EnsemblGenome=FN1644\|UniProtKB=Q8RIF6	Fusobacterium nucleatum	LDO
HELPY\|EnsemblGenome=HP_1318\|UniProtKB=P56032	Helicobacter pylori	LDO
NEIMB\|EnsemblGenome=NMB0143\|UniProtKB=P61057	Neisseria meningitidis serogroup b	LDO
GEOSL\|EnsemblGenome=GSU2856\|UniProtKB=P61063	Geobacter sulfurreducens	LDO
BRADU\|EnsemblGenome=BAC50664\|UniProtKB=Q89J85	Bradyrhizobium diazoefficiens	LDO
COXBU\|EnsemblGenome=CBU_0239\|UniProtKB=Q83ES3	Coxiella burnetii	LDO
HAEIN\|EnsemblGenome=HI_0778\|UniProtKB=P44345	Haemophilus influenzae	LDO
SHEON\|Gene_OrderedLocusName=SO_0232\|UniProtKB=Q8EK67	Shewanella oneidensis	LDO
VIBCH\|EnsemblGenome=VC_2595\|UniProtKB=Q9KNY5	Vibrio cholerae	LDO
XANCP\|EnsemblGenome=XCC0896\|UniProtKB=Q8PC48	Xanthomonas campestris	LDO
PSEAE\|EnsemblGenome=PA4262\|UniProtKB=Q9HWD6	Pseudomonas aeruginosa	LDO
SALTY\|EnsemblGenome=STM3439\|UniProtKB=P60726	Salmonella typhimurium	LDO
YERPE\|EnsemblGenome=YP_0208\|UniProtKB=P60730	Yersinia pestis	LDO
ECOLI\|EnsemblGenome=BAE77972\|UniProtKB=P60723	Escherichia coli	LDO