PANTHER Gene Information

Gene Symbol(s):

TRIM4

Organism:

Sus scrofa

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Gene Name:

E3 ubiquitin-protein ligase TRIM4 isoform beta

Gene ID:

ENSSSCG00000007637.5

Protein ID:

F1RNQ5

Persistent Id:

PTN001535800

Alternate Ids:

311250965(GI)	XP_003124381(refSeq)
100525393(GeneID)	ENSSSCG00000007637(Ensembl)
ENSSSCT00000008377(Ensembl_TRS)	ENSSSCP00000008158(Ensembl_PRO)
HDA90852(EMBL-CDS)	F1RNQ5(Synonym)
F1RNQ5_PIG(UniProtKB-ID)	DQIR01135376(EMBL)
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PANTHER Classification

PANTHER Family:	E3 UBIQUITIN-PROTEIN LIGASE TRIM (PTHR24103)
PANTHER Subfamily:	E3 UBIQUITIN-PROTEIN LIGASE TRIM4 (PTHR24103:SF670)
PANTHER GO-slim Molecular Function:	ubiquitin protein ligase activity
PANTHER GO-slim Biological Process:	protein ubiquitination innate immune response regulation of gene expression
PANTHER GO-slim Cellular Component:	cytoplasm
PANTHER protein class:	ubiquitin-protein ligase

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	zinc ion binding, identical protein binding, ubiquitin protein ligase activity
GO BP Complete:	innate immune response, regulation of gene expression
GO CC Complete:	cytoplasm, cytosol, plasma membrane

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Immune System, Antigen processing: Ubiquitination & Proteasome degradation, Class I MHC mediated antigen processing & presentation, Adaptive Immune System

Orthologs

ID	Organism	Type
HUMAN\|HGNC=16275\|UniProtKB=Q9C037	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000047991.1\|UniProtKB=A0A2I3SNK6	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000044005.1\|UniProtKB=A0A2I2YUD1	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000022502.4\|UniProtKB=A0A1D5QX36	Macaca mulatta	LDO
BOVIN\|Ensembl=ENSBTAG00000050135.1\|UniProtKB=A0A3Q1LVT3	Bos taurus	LDO
HORSE\|Ensembl=ENSECAG00000014342.4\|UniProtKB=A0A3Q2H7Z0	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000025749.4\|UniProtKB=M3WX47	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845024553.1\|UniProtKB=A0A8I3PRY7	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845002953.1\|UniProtKB=A0A8I3MPJ4	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000039692.1\|UniProtKB=A0A5F8GSI3	Monodelphis domestica	O
CHICK\|Ensembl=ENSGALG00010029560.1\|UniProtKB=A0A8V1AP69	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000025926.3\|UniProtKB=G1KUV1	Anolis carolinensis	O
ANOCA\|Ensembl=ENSACAG00000014928.4\|UniProtKB=H9GLQ3	Anolis carolinensis	O
ANOCA\|Ensembl=ENSACAG00000017237.3\|UniProtKB=H9GP47	Anolis carolinensis	O
ANOCA\|Ensembl=ENSACAG00000011368.4\|UniProtKB=G1KL65	Anolis carolinensis	O
ORYLA\|Ensembl=ENSORLG00000007167.2\|UniProtKB=H2LSC7	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-060825-228\|UniProtKB=F1Q977	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000009030.1\|UniProtKB=W5MRJ6	lepisosteus oculatus	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_107250\|UniProtKB=C3ZKR2	Branchiostoma floridae	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_118421\|UniProtKB=C3ZGA6	Branchiostoma floridae	O
BRAFL\|Gene=LOC118417355\|UniProtKB=A0A9J7MTS3	Branchiostoma floridae	O
BRAFL\|Gene=LOC118423726\|UniProtKB=A0A9J7LSV8	Branchiostoma floridae	O
BRAFL\|Gene=LOC118417354\|UniProtKB=A0A9J7MU30	Branchiostoma floridae	O
BRAFL\|Gene=LOC118429289\|UniProtKB=A0A9J7M7K9	Branchiostoma floridae	O
BRAFL\|Gene=LOC118426733\|UniProtKB=A0A9J7M0M9	Branchiostoma floridae	O
CAEEL\|WormBase=WBGene00021640\|UniProtKB=Q9N3T6	Caenorhabditis elegans	O
HELRO\|EnsemblGenome=HelroG193539\|UniProtKB=T1FV38	helobdella robusta	O
DICPU\|EnsemblGenome=DICPUDRAFT_96644\|UniProtKB=F0ZA65	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_36_1550\|UniProtKB=Q4Q1S1	Leishmania major	O
PARTE\|EnsemblGenome=GSPATT00006650001\|UniProtKB=A0C977	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00019138001\|UniProtKB=A0DPI9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00002189001\|UniProtKB=A0DG93	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00005047001\|UniProtKB=A0BP31	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00004438001\|UniProtKB=A0BCS7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00027177001\|UniProtKB=A0EHR0	Paramecium tetraurelia	O