PANTHER Gene Information

Gene Symbol(s):

C1H9orf78

Organism:

Sus scrofa

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Gene Name:

Chromosome 1 C9orf78 homolog

Gene ID:

ENSSSCG00005004430.1

Protein ID:

F1RQE0

Persistent Id:

PTN001412910

Alternate Ids:

DQIR01067067(EMBL)	HDA68565(EMBL-CDS)
100518947(GeneID)	ENSSSCP00005003811(Ensembl_PRO)
XM_003122220(refSeq)	311246626(GI)
ENSSSCT00000024953(Ensembl_TRS)	F1RQE0_PIG(UniProtKB-ID)
ENSSSCG00000030426(Ensembl)	F1RQE0(Synonym)
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PANTHER Classification

PANTHER Family:	TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER (PTHR13486)
PANTHER Subfamily:	SPLICING FACTOR C9ORF78 (PTHR13486:SF2)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	spliceosomal complex
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	U5 snRNA binding
GO BP Complete:	mRNA cis splicing, via spliceosome, regulation of homologous chromosome segregation, mRNA splicing, via spliceosome
GO CC Complete:	spliceosomal complex, cytosol, chromosome, centromeric region, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Processing of Capped Intron-Containing Pre-mRNA, mRNA Splicing, Metabolism of RNA, mRNA Splicing - Major Pathway

Orthologs

ID	Organism	Type
HUMAN\|HGNC=24932\|UniProtKB=Q9NZ63	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000021465.7\|UniProtKB=H2QY12	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000013358.3\|UniProtKB=G3RC13	Gorilla gorilla gorilla	LDO
MOUSE\|MGI=MGI=2385132\|UniProtKB=Q3TQI7	Mus musculus	LDO
RAT\|RGD=1305178\|UniProtKB=A0A096MJX5	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000020307.5\|UniProtKB=Q1JQC8	Bos taurus	LDO
HORSE\|Ensembl=ENSECAG00000018958.4\|UniProtKB=F7B164	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000004761.6\|UniProtKB=M3W2T1	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845009927.1\|UniProtKB=A0A8I3RVI2	Canis lupus familiaris	O
CANLF\|Ensembl=ENSCAFG00845023258.1\|UniProtKB=A0A8I3PEF5	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000006832.3\|UniProtKB=F6PG42	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000037333.1\|UniProtKB=A0A6I8NC17	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010028498.1\|UniProtKB=F1P4D4	Gallus gallus	LDO
XENLA\|Gene=c9orf78.L\|UniProtKB=Q640Y5	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5877135\|UniProtKB=F6WZL2	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011338.2\|UniProtKB=H2M6V3	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-041010-15\|UniProtKB=Q5XJ46	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000000616.1\|UniProtKB=W5M8W8	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000009616.3\|UniProtKB=F7ACY4	Ciona intestinalis	LDO
BRAFL\|Gene_ORFName=BRAFLDRAFT_63995\|UniProtKB=C3ZCM5	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC752208\|UniProtKB=A0A7M7PRD7	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00011969\|UniProtKB=Q9XVH9	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00023714\|UniProtKB=A8WMN4	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00304613\|UniProtKB=A0A8R1V2N1	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0035254\|UniProtKB=Q9W0A9	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP006620\|UniProtKB=Q7Q562	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC003173\|UniProtKB=D6WEK7	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_305639\|UniProtKB=E9FWZ6	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW001649\|UniProtKB=B7P7C6	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG186177\|UniProtKB=T1FNR9	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g160725\|UniProtKB=A7RMW7	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG50676\|UniProtKB=B3S591	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_25044\|UniProtKB=A9UXL7	Monosiga brevicollis	LDO
EMENI\|EnsemblGenome=ANIA_07442\|UniProtKB=C8VBB6	Emericella nidulans	LDO
NEUCR\|EnsemblGenome=NCU02731\|UniProtKB=Q7SGB8	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_12863\|UniProtKB=A7F5I5	Sclerotinia sclerotiorum	LDO
SCHPO\|PomBase=SPAC1D4.01\|UniProtKB=Q10148	Schizosaccharomyces pombe	LDO
CRYNJ\|EnsemblGenome=CNB03570\|UniProtKB=Q5KLY9	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06477\|UniProtKB=A0A0D1BWV1	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_10545\|UniProtKB=E3KIP2	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_26637\|UniProtKB=F4P7U6	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0268774\|UniProtKB=Q55ER9	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_156758\|UniProtKB=F0ZXC9	Dictyostelium purpureum	LDO
PLAF7\|EnsemblGenome=PF3D7_1468200\|UniProtKB=Q8IKF5	Plasmodium falciparum	LDO
CHLRE\|EnsemblGenome=CHLRE_10g423350v5\|UniProtKB=A8ICG2	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00045p00207500\|UniProtKB=W1P5I2	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_12G00270\|UniProtKB=A0A0K9PZ48	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma07_g17630\|UniProtKB=A0A804JWU8	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_036407mg\|UniProtKB=K4AC00	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G358500\|UniProtKB=C5WYN7	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb018120\|UniProtKB=B4FSC7	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0374100\|UniProtKB=Q7Y163	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g61360v3\|UniProtKB=I1H536	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.6HG0631910\|UniProtKB=F2DRT5	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS6A02G407300\|UniProtKB=A0A3B6NX60	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G452500\|UniProtKB=A0A3B6PT20	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G452700\|UniProtKB=A0A3B6PUB6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G407200\|UniProtKB=A0A3B6NVL6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G391200\|UniProtKB=A0A3B6QLD4	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_003238\|UniProtKB=A0A1U7ZNQ0	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110782661\|UniProtKB=A0A9R0JPP9	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr09g0397951\|UniProtKB=A0A251U0G8	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr01g0029361\|UniProtKB=A0A251VPQ7	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C100031400\|UniProtKB=A0A9R1WRY9	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a011516mg\|UniProtKB=A0A022S3Q0	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_02650\|UniProtKB=A0A1U8DWJ4	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400000840\|UniProtKB=M0ZJS3	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc01g068580.3\|UniProtKB=A0A3Q7F0G5	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107810621\|UniProtKB=A0A1S4BPV9	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107778924\|UniProtKB=A0A1S3YRR1	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi07g02248\|UniProtKB=F6HZE7	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A00989\|UniProtKB=A0A059DDG2	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C05P01100.1\|UniProtKB=A0A078FLB2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra033313\|UniProtKB=A0A397XPU8	Brassica campestris	LDO
ARATH\|TAIR=locus=2204888\|UniProtKB=F4HVZ5	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107912287\|UniProtKB=A0A1U8K5H8	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_004978\|UniProtKB=A0A061DZN7	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g023468mg\|UniProtKB=A0A067H423	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G110200v3\|UniProtKB=B9I987	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_14G164500\|UniProtKB=A0A2C9UM93	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1297580\|UniProtKB=B9S044	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_10G140000\|UniProtKB=C6TJK7	Glycine max	LDO
SOYBN\|EnsemblGenome=GLYMA_02G006400\|UniProtKB=I1JB93	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_1g085470\|UniProtKB=A0A072VMT1	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr11_17410\|UniProtKB=A0A2I4GGU5	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_5G129300\|UniProtKB=A0A0A0KLP5	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_3G000500\|UniProtKB=M5XB50	Prunus persica	LDO
PHYPA\|EnsemblGenome=Pp3c5_5390\|UniProtKB=A0A2K1KIK5	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c6_17910\|UniProtKB=A9RK59	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0012s0210\|UniProtKB=A0A2R6XJN5	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_003260110\|UniProtKB=A0A1Y1IFZ6	Klebsormidium nitens	LDO