PANTHER Gene Information

Gene Symbol(s):

POPTR_001G131000

Organism:

Populus trichocarpa

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Gene Name:

60S ribosomal protein L13

Gene ID:

POPTR_001G131000v3

Protein ID:

B9MUD1

Persistent Id:

PTN001711940

Alternate Ids:

PNT54258(EMBL-CDS)	POPTR_001G131000v3(Ensembl)
B9MUD1(Synonym)	CM009290(EMBL)
B9MUD1_POPTR(UniProtKB-ID)	18094068(GeneID)
566146555(GI)	XM_006368228(refSeq)
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PANTHER Classification

PANTHER Family:	60S RIBOSOMAL PROTEIN L13 (PTHR11722)
PANTHER Subfamily:	60S RIBOSOMAL PROTEIN L13-3-LIKE (PTHR11722:SF21)
PANTHER GO-slim Molecular Function:	RNA binding structural constituent of ribosome
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:	cytosolic large ribosomal subunit
PANTHER protein class:	ribosomal protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	RNA binding, structural constituent of ribosome
GO BP Complete:	translation
GO CC Complete:	cytosolic large ribosomal subunit, ribosome, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
PANTR\|Ensembl=ENSPTRG00000047911.1\|UniProtKB=A0A2I3SBA7	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000026762.2\|UniProtKB=G3SJ01	Gorilla gorilla gorilla	O
HUMAN\|HGNC=10303\|UniProtKB=P26373	Homo sapiens	O
PANTR\|Ensembl=ENSPTRG00000041770.2\|UniProtKB=A0A2I3T8C2	Pan troglodytes	O
PANTR\|Ensembl=ENSPTRG00000008480.6\|UniProtKB=A0A2J8J0C9	Pan troglodytes	O
GORGO\|Ensembl=ENSGGOG00000025427.2\|UniProtKB=G3RUF5	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000017928.4\|UniProtKB=F7ES75	Macaca mulatta	O
MOUSE\|MGI=MGI=105922\|UniProtKB=P47963	Mus musculus	O
RAT\|RGD=2320504\|UniProtKB=F1M2E9	Rattus norvegicus	O
RAT\|RGD=150342712\|UniProtKB=A0A8I5ZNK4	Rattus norvegicus	O
RAT\|RGD=150342471\|UniProtKB=A0A8I6A3N6	Rattus norvegicus	O
RAT\|RGD=15003735\|UniProtKB=D3ZD02	Rattus norvegicus	O
RAT\|RGD=621179\|UniProtKB=P41123	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000033143.4\|UniProtKB=A0A3Q1M4M0	Bos taurus	O
BOVIN\|Gene=RPL13\|UniProtKB=Q56JZ1	Bos taurus	O
BOVIN\|Ensembl=ENSBTAG00000012044.6\|UniProtKB=F1MK30	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000007813.3\|UniProtKB=A0A287A0X9	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000024974.4\|UniProtKB=I3LSD3	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000011670.4\|UniProtKB=F6ZX61	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000003338.5\|UniProtKB=M3W059	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845002331.1\|UniProtKB=A0A8I3MST1	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000003663.3\|UniProtKB=F7ACE7	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000006729.3\|UniProtKB=F6Q2G5	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010007998\|UniProtKB=P41125	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000017072.3\|UniProtKB=H9GNX3	Anolis carolinensis	O
XENLA\|Gene=rpl13.S\|UniProtKB=Q6DJN5	Xenopus laevis	O
XENLA\|Gene=LOC121393045\|UniProtKB=A0A8J1MYL8	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-964820\|UniProtKB=Q6P639	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000007654.2\|UniProtKB=H2LU17	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-031007-1\|UniProtKB=Q90Z10	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000004063.1\|UniProtKB=W5M8Z4	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000002582.3\|UniProtKB=F6TRZ2	Ciona intestinalis	O
BRAFL\|Gene_ORFName=BRAFLDRAFT_279721\|UniProtKB=C3YFH5	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC105441899\|UniProtKB=A0A7M7N4L8	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00004425\|UniProtKB=P91128	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00033019\|UniProtKB=A8XEB6	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00204999\|UniProtKB=A0A2A6BUB5	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0011272\|UniProtKB=P41126	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP001805\|UniProtKB=Q7PUQ7	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC013086\|UniProtKB=D6WJ61	Tribolium castaneum	O
TRICA\|EnsemblGenome=TC031495\|UniProtKB=A0A139WP72	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_34614\|UniProtKB=E9G6K9	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW023068\|UniProtKB=B7QLY1	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG105042\|UniProtKB=T1EDP9	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g242697\|UniProtKB=A7S405	Nematostella vectensis	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g46075\|UniProtKB=A7T5P0	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG37040\|UniProtKB=B3RIP5	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_33322\|UniProtKB=A9V4Q1	Monosiga brevicollis	O
YEAST\|SGD=S000002240\|UniProtKB=Q12690	Saccharomyces cerevisiae	O
YEAST\|SGD=S000004750\|UniProtKB=P40212	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_ADR257C\|UniProtKB=Q759L9	Eremothecium gossypii	O
CANAL\|CGD=CAL0000201310\|UniProtKB=O59931	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_B12826g\|UniProtKB=Q6CEU6	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_07003\|UniProtKB=Q5AXH7	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_4G04460\|UniProtKB=Q4W9L9	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU05554\|UniProtKB=Q7S709	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_02894\|UniProtKB=A7EC56	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_08180\|UniProtKB=Q0UJ84	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC664.05\|UniProtKB=O74175	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_01608\|UniProtKB=B6JYE7	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CNM01020\|UniProtKB=Q5K7W8	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_02924\|UniProtKB=A0A0D1DXS9	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_01572\|UniProtKB=E3JSK6	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_6028\|UniProtKB=F4P0I3	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_181560\|UniProtKB=C4M8R8	Entamoeba histolytica	O
ENTH1\|EnsemblGenome=CL6EHI_187150\|UniProtKB=C4LVT2	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0291870\|UniProtKB=Q54E20	Dictyostelium discoideum	O
LEIMA\|EnsemblGenome=LMJF_29_2460\|UniProtKB=E9AEA8	Leishmania major	O
LEIMA\|EnsemblGenome=LMJF_29_2470\|UniProtKB=E9AEA9	Leishmania major	O
TRYB2\|Gene_ORFName=Tb927.3.3320\|UniProtKB=Q57V54	Trypanosoma brucei	O
TRYB2\|Gene_ORFName=Tb927.3.3310\|UniProtKB=Q57V55	Trypanosoma brucei	O
GIAIC\|Gene_ORFName=GL50803_0014622\|UniProtKB=A0A644EZT7	Giardia intestinalis	O
TRIV3\|Gene_ORFName=TVAG_199380\|UniProtKB=A2DDX3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_438370\|UniProtKB=A2EYN3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_182520\|UniProtKB=A2D8Z0	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_190280\|UniProtKB=A2DKF7	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_423320\|UniProtKB=A2DTH0	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_112230\|UniProtKB=A2G4E1	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_0814000\|UniProtKB=Q8IAX6	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00020719001\|UniProtKB=A0DVJ9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00003160001\|UniProtKB=A0BIU7	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00001333001\|UniProtKB=A0CWG3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00025180001\|UniProtKB=A0EAX9	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00009082001\|UniProtKB=A0CPH3	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00002709001\|UniProtKB=A0DQJ2	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00005335001\|UniProtKB=A0BPW8	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00021967001\|UniProtKB=A0E0I2	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_22476\|UniProtKB=B8C0K6	Thalassiosira pseudonana	O
PHYRM\|Gene=H3G8S1_PHYRM\|UniProtKB=H3G8S1	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_14g630100v5\|UniProtKB=A8IUV7	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00022p00239970\|UniProtKB=W1PWL1	Amborella trichopoda	O
AMBTC\|EnsemblGenome=AMTR_s00029p00111280\|UniProtKB=W1PNU8	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_194G00100\|UniProtKB=A0A0K9PRA6	Zostera marina	O
MUSAM\|EnsemblGenome=Ma00_g01840\|UniProtKB=A0A804HME4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g12360\|UniProtKB=A0A804INX4	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma11_g07600\|UniProtKB=A0A804L5D2	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma03_g28710\|UniProtKB=A0A804IHG7	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma04_g04610\|UniProtKB=A0A804IL19	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_031403mg\|UniProtKB=K3ZXS1	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_002930mg\|UniProtKB=K3XM13	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_037532mg\|UniProtKB=K4AF75	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_004590mg\|UniProtKB=K3XRP6	Setaria italica	O
SETIT\|EnsemblGenome=SETIT_002931mg\|UniProtKB=K3XM08	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3003G408100\|UniProtKB=C5XGD3	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb143000\|UniProtKB=B4FWR7	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb364190\|UniProtKB=B6T5F2	Zea mays	O
SORBI\|EnsemblGenome=SORBI_3009G237200\|UniProtKB=C5YVY9	Sorghum bicolor	O
SORBI\|EnsemblGenome=SORBI_3009G065400\|UniProtKB=C5Z173	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb282960\|UniProtKB=B6UIJ6	Zea mays	O
ORYSJ\|EnsemblGenome=Os06g0115500\|UniProtKB=Q9LWS2	Oryza sativa	O
ORYSJ\|EnsemblGenome=Os03g0576700\|UniProtKB=Q7XJB4	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_3g01600v3\|UniProtKB=I1HWE1	Brachypodium distachyon	O
BRADI\|EnsemblGenome=BRADI_3g16170v3\|UniProtKB=I1I1B1	Brachypodium distachyon	O
WHEAT\|EnsemblGenome=TraesCS7A02G296800\|UniProtKB=A0A3B6RJP2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6B02G064300\|UniProtKB=A0A3B6PFU3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6D02G055400\|UniProtKB=A0A3B6QBU0	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7D02G292800\|UniProtKB=A0A3B6TRQ4	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS7B02G189800\|UniProtKB=A0A3B6SEW6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS6A02G047900\|UniProtKB=A0A3B6NJZ9	Triticum aestivum	O
NELNU\|Gene=LOC104612876\|UniProtKB=A0A1U8BBP6	Nelumbo nucifera	O
NELNU\|Gene=LOC104587521\|UniProtKB=A0A1U7YZ60	Nelumbo nucifera	O
NELNU\|Gene_ORFName=HUJ06_030832\|UniProtKB=A0A1U8ASI6	Nelumbo nucifera	O
NELNU\|Gene=LOC104606030\|UniProtKB=A0A1U8AP43	Nelumbo nucifera	O
SPIOL\|Gene=LOC110781040\|UniProtKB=A0A9R0I1N4	Spinacia oleracea	O
SPIOL\|Gene=LOC110801326\|UniProtKB=A0A9R0J6Z1	Spinacia oleracea	LDO
SELML\|EnsemblGenome=SELMODRAFT_165483\|UniProtKB=D8QUV0	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_266648\|UniProtKB=D8QUC7	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c13_15900\|UniProtKB=A0A7I4AIT0	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c10_7370\|UniProtKB=A0A2K1JY30	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c1_26280\|UniProtKB=A0A2K1L9U4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c3_21130\|UniProtKB=A0A2K1KVF4	Physcomitrella patens	O
PHYPA\|EnsemblGenome=Pp3c14_3490\|UniProtKB=A9SVU5	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0055s0071\|UniProtKB=A0A2R6WVD2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0005s0116\|UniProtKB=A0A2R6XQU7	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_004610040\|UniProtKB=A0A1Y1IH52	Klebsormidium nitens	O
KORCO\|EnsemblGenome=Kcr_0697\|UniProtKB=B1L4R9	Korarchaeum cryptofilum	O