PANTHER Gene Information

Gene Symbol(s):

POPTR_002G001700

Organism:

Populus trichocarpa

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Gene Name:

Tetratricopeptide repeat protein SKI3

Gene ID:

POPTR_002G001700v3

Protein ID:

B9GPL2

Persistent Id:

PTN002311710

Alternate Ids:

PNT47016(EMBL-CDS)	XM_002301849(refSeq)
B9GPL2(Synonym)	566155494(GI)
POPTR_002G001700v3(Ensembl)	CM009291(EMBL)
B9GPL2_POPTR(UniProtKB-ID)	7474535(GeneID)
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PANTHER Classification

PANTHER Family:	SUPERKILLER 3 PROTEIN-RELATED (PTHR15704)
PANTHER Subfamily:	SUPERKILLER COMPLEX PROTEIN 3 (PTHR15704:SF7)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	nuclear-transcribed mRNA catabolic process
PANTHER GO-slim Cellular Component:	protein-containing complex cytoplasm
PANTHER protein class:

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	positive regulation of wax biosynthetic process, nuclear-transcribed mRNA catabolic process, nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay, post-transcriptional gene silencing, RNA catabolic process
GO CC Complete:	cytoplasm, Ski complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=23639\|UniProtKB=Q6PGP7	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000017083.5\|UniProtKB=K7DTG0	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000025709.2\|UniProtKB=G3RT11	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000001205.4\|UniProtKB=F7DAC0	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2679923\|UniProtKB=F8VPK0	Mus musculus	LDO
RAT\|RGD=1306062\|UniProtKB=D3ZL50	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000009131.6\|UniProtKB=E1B885	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000037477.3\|UniProtKB=A0A8W4FD02	Sus scrofa	O
PIG\|Ensembl=ENSSSCG00000014165.5\|UniProtKB=A0A287BBA7	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000025048.4\|UniProtKB=A0A3Q2GV14	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000010817.6\|UniProtKB=M3WDZ7	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845013946.1\|UniProtKB=A0A8I3S0I0	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000020106.4\|UniProtKB=F7EAH4	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000011060.3\|UniProtKB=F7FKP2	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010013132.1\|UniProtKB=E1C576	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000013091.4\|UniProtKB=G1KNB5	Anolis carolinensis	LDO
XENLA\|Gene=ttc37\|UniProtKB=Q6DFB8	Xenopus laevis	LDO
XENLA\|Gene=ttc37.L\|UniProtKB=A0A8J1M675	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5929177\|UniProtKB=F6VT02	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000010323.2\|UniProtKB=H2M3D3	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-110125-2\|UniProtKB=E7F2R1	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000001504.1\|UniProtKB=W5M043	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000018889.1\|UniProtKB=H2XVM3	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118409911\|UniProtKB=A0A9J7KNC8	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC577162\|UniProtKB=A0A7M7SUT8	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00021613\|UniProtKB=Q9BKR2	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00030448\|UniProtKB=A8X6S2	Caenorhabditis briggsae	LDO
DROME\|FlyBase=FBgn0033376\|UniProtKB=Q6NNB2	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP003279\|UniProtKB=Q7QKK1	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC031189\|UniProtKB=A0A139WFG6	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_220148\|UniProtKB=E9FQY4	Daphnia pulex	LDO
HELRO\|EnsemblGenome=HelroG183847\|UniProtKB=T1FK95	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g116212\|UniProtKB=A7SF84	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG54351\|UniProtKB=B3RRS9	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_9031\|UniProtKB=A9V1V9	Monosiga brevicollis	O
MONBE\|EnsemblGenome=MONBRDRAFT_7095\|UniProtKB=A9UVW9	Monosiga brevicollis	LDO
YEAST\|SGD=S000006393\|UniProtKB=P17883	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AEL281C\|UniProtKB=Q758N6	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000188763\|UniProtKB=Q5APB7	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F00286g\|UniProtKB=Q6C3F0	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_03014\|UniProtKB=Q5B8W6	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_3G08810\|UniProtKB=Q4WXA6	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU09438\|UniProtKB=Q7S1X7	Neurospora crassa	LDO
SCLS1\|Gene_ORFName=SS1G_11868\|UniProtKB=A7F3M2	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_15803\|UniProtKB=Q0TXP6	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPCC1919.05\|UniProtKB=O94474	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_03805\|UniProtKB=B6K539	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND01700\|UniProtKB=Q5KIU7	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_12154\|UniProtKB=A0A0D1ECR1	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_14344\|UniProtKB=E3KVG5	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_92633\|UniProtKB=F4PDS3	Batrachochytrium dendrobatidis	LDO
DICDI\|dictyBase=DDB_G0270096\|UniProtKB=Q55CE4	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_76739\|UniProtKB=F0ZEH4	Dictyostelium purpureum	O
DICDI\|dictyBase=DDB_G0289175\|UniProtKB=Q54HV0	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_49821\|UniProtKB=F0ZVK2	Dictyostelium purpureum	LDO
TRIV3\|Gene_ORFName=TVAG_447430\|UniProtKB=A2DS14	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_392280\|UniProtKB=A2DWS9	Trichomonas vaginalis	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_4066\|UniProtKB=B8C0U3	Thalassiosira pseudonana	O
THAPS\|EnsemblGenome=THAPSDRAFT_25485\|UniProtKB=B8LDC6	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GNS6_PHYRM\|UniProtKB=H3GNS6	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_12g493550v5\|UniProtKB=A0A2K3D1T8	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00022p00059860\|UniProtKB=W1PVW6	Amborella trichopoda	LDO
MUSAM\|EnsemblGenome=Ma09_g20240\|UniProtKB=A0A804KLP5	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_033941mg\|UniProtKB=K4A4Y7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G306900\|UniProtKB=A0A1B6QM34	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb022830\|UniProtKB=A0A804LMY6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os10g0548200\|UniProtKB=Q336U8	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_3g32780v3\|UniProtKB=I1I5Y7	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.1HG0055650\|UniProtKB=A0A8I6X636	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS1B02G221400\|UniProtKB=A0A3B5YX93	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1D02G211000\|UniProtKB=A0A3B5ZW23	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS1A02G207700\|UniProtKB=A0A3B5Y101	Triticum aestivum	LDO
NELNU\|Gene=LOC104606906\|UniProtKB=A0A1U8ART4	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110806229\|UniProtKB=A0A9R0KDD6	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr16g0748411\|UniProtKB=A0A251RYM5	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C900476100\|UniProtKB=A0A9R1UGN9	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000406mg\|UniProtKB=A0A022Q824	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_13537\|UniProtKB=A0A2G2ZSZ3	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc04g082980.2\|UniProtKB=A0A3Q7H4E1	Solanum lycopersicum	LDO
VITVI\|Gene_OrderedLocusName=VIT_18s0122g00260\|UniProtKB=F6I6X8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_F03624\|UniProtKB=A0A059BVX0	Eucalyptus grandis	LDO
BRACM\|EnsemblGenome=Bra015729\|UniProtKB=M4DGV3	Brassica campestris	LDO
ARATH\|TAIR=locus=2011666\|UniProtKB=F4I3Z5	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107905709\|UniProtKB=A0A1U8JHW8	Gossypium hirsutum	O
GOSHI\|Gene=LOC107905746\|UniProtKB=A0A1U8JH37	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_034795\|UniProtKB=A0A061FMV5	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g045024mg\|UniProtKB=A0A067HC24	Citrus sinensis	LDO
RICCO\|Gene_ORFName=RCOM_1602530\|UniProtKB=B9R8W2	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_01G245200\|UniProtKB=K7K5N8	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g004660\|UniProtKB=A0A072UCY8	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr08_10220\|UniProtKB=A0A2I4FMS1	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_4G665130\|UniProtKB=A0A0A0L4Q4	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G001100\|UniProtKB=A0A251P147	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_431495\|UniProtKB=D8TCU6	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_115934\|UniProtKB=D8SFV6	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_40357\|UniProtKB=D8SFV2	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c9_11110\|UniProtKB=A0A2K1K2U0	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0002s0268\|UniProtKB=A0A2R6XUP3	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_002090180\|UniProtKB=A0A1Y1I850	Klebsormidium nitens	LDO